##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545380_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 464720 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.186839387157857 31.0 31.0 33.0 30.0 34.0 2 31.55438758822517 31.0 31.0 34.0 30.0 34.0 3 31.693604751248063 31.0 31.0 34.0 30.0 34.0 4 35.51809691857463 37.0 35.0 37.0 33.0 37.0 5 35.440288776037185 37.0 35.0 37.0 33.0 37.0 6 35.49160139438802 37.0 35.0 37.0 33.0 37.0 7 35.851844121191256 37.0 35.0 37.0 35.0 37.0 8 35.90354406954725 37.0 35.0 37.0 35.0 37.0 9 37.80601437424686 39.0 37.0 39.0 35.0 39.0 10 37.12961783439491 39.0 37.0 39.0 33.0 39.0 11 36.77604148734722 39.0 35.0 39.0 32.0 39.0 12 36.253322430710966 38.0 35.0 39.0 32.0 39.0 13 36.04503572043381 38.0 35.0 39.0 31.0 39.0 14 37.059224909623 39.0 35.0 41.0 31.0 41.0 15 37.24725641246342 39.0 35.0 41.0 32.0 41.0 16 37.29005422620072 39.0 35.0 41.0 32.0 41.0 17 37.188915906352214 39.0 35.0 41.0 32.0 41.0 18 37.110242726803236 39.0 35.0 41.0 32.0 41.0 19 37.06395463935273 38.0 35.0 41.0 32.0 41.0 20 36.927197021862625 38.0 35.0 41.0 32.0 41.0 21 36.823145119641936 38.0 35.0 41.0 31.0 41.0 22 36.71982484076433 38.0 35.0 41.0 31.0 41.0 23 36.64178860389052 38.0 35.0 41.0 31.0 41.0 24 36.554663022895504 38.0 35.0 40.0 31.0 41.0 25 36.446361249784815 38.0 35.0 40.0 31.0 41.0 26 36.28919134102255 38.0 35.0 40.0 30.0 41.0 27 36.178313823377515 38.0 35.0 40.0 30.0 41.0 28 36.105308572904114 38.0 35.0 40.0 30.0 41.0 29 36.18375150628335 38.0 35.0 40.0 30.0 41.0 30 36.13383757961783 38.0 35.0 40.0 30.0 41.0 31 36.02369168531589 38.0 35.0 40.0 30.0 41.0 32 35.86792046823894 38.0 35.0 40.0 29.0 41.0 33 35.64513900843519 38.0 34.0 40.0 29.0 41.0 34 35.44357677741436 38.0 34.0 40.0 27.0 41.0 35 35.30477061456361 38.0 34.0 40.0 27.0 41.0 36 35.16556851437425 38.0 34.0 40.0 26.0 41.0 37 35.07080392494405 38.0 34.0 40.0 26.0 41.0 38 35.0022099328628 38.0 34.0 40.0 26.0 41.0 39 34.950451885006025 37.0 34.0 40.0 25.0 41.0 40 34.804755551730075 37.0 34.0 40.0 24.0 41.0 41 34.729579101394386 37.0 34.0 40.0 24.0 41.0 42 34.67652134618695 37.0 33.0 40.0 24.0 41.0 43 34.557841280771214 37.0 33.0 40.0 24.0 41.0 44 34.43671458082286 37.0 33.0 40.0 23.0 41.0 45 34.41225899466345 37.0 33.0 40.0 23.0 41.0 46 34.42062962644173 36.0 33.0 40.0 23.0 41.0 47 34.40313522120847 36.0 33.0 40.0 23.0 41.0 48 34.31714796006197 36.0 33.0 40.0 23.0 41.0 49 34.27305259080737 36.0 33.0 40.0 24.0 41.0 50 34.182531416767084 36.0 33.0 40.0 24.0 41.0 51 33.92483646066449 36.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 1.0 11 0.0 12 2.0 13 2.0 14 3.0 15 10.0 16 36.0 17 91.0 18 224.0 19 402.0 20 799.0 21 1130.0 22 1862.0 23 2685.0 24 3868.0 25 5552.0 26 7578.0 27 8872.0 28 9477.0 29 10792.0 30 12570.0 31 14840.0 32 18451.0 33 23803.0 34 38135.0 35 51888.0 36 35206.0 37 44679.0 38 65028.0 39 106685.0 40 47.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.35346014804614 24.04652263728697 28.210320192804268 15.389697021862627 2 31.482398003098638 25.367963504906182 29.782234463763125 13.367404028232055 3 28.58818213117576 25.334394904458602 32.18669306248924 13.890729901876398 4 25.107161301428814 27.90153210535376 32.17744017903254 14.813866414184885 5 22.87506455500086 32.026166293682216 30.842657944568774 14.256111206748148 6 21.415475985539683 41.030297813737306 27.051557927354107 10.502668273368911 7 88.26820451024273 3.325443277672577 6.898347391977966 1.5080048201067309 8 89.4364348424858 2.3183852642451366 6.634962988466173 1.610216904802892 9 84.72370459631607 4.267300740230676 8.304355310724738 2.704639352728525 10 43.851136168015145 28.22861077638148 15.12674298502324 12.793510070580133 11 34.78718368049578 22.820838354277846 25.491478739886382 16.900499225339992 12 32.63427440179033 21.455069719400928 28.191384059218453 17.71927181959029 13 22.987390256498536 29.77169048028921 29.069977620933035 18.170941642279224 14 19.33207092442761 31.791616457221554 30.382380788431746 18.49393182991909 15 19.370158374935446 23.444009295920125 39.28343949044586 17.90239283869857 16 21.335642967808575 20.823291444310552 37.641590635221206 20.199474952659667 17 20.836632811155102 21.669392322258567 29.988810466517474 27.50516440006886 18 23.4857548631434 23.643914615252196 31.782363573764847 21.087966947839558 19 26.522206920296092 25.808443794112584 26.57750903770012 21.091840247891202 20 28.937639869168528 24.199517989326907 26.5581425374419 20.304699604062662 21 24.600834911344467 26.11981408159752 28.258090893441214 21.0212601136168 22 23.7941125839215 24.16616457221553 28.110259941470133 23.92946290239284 23 21.818944740919264 27.51570838354278 27.764029953520396 22.90131692201756 24 22.217033912893786 24.283654673782063 33.96819590290928 19.531115510414875 25 21.307453950766053 25.63328455844379 30.321053537614045 22.738207953176108 26 20.708168359442244 28.89524875193665 27.8434326045791 22.553150284042005 27 20.406050955414013 27.50688586675848 29.43299190910656 22.654071268720948 28 19.407169908762263 26.50778963677053 32.99728868996385 21.087751764503356 29 19.847435014632467 24.429979342399726 33.02052849027371 22.702057152694096 30 21.72275778963677 26.57428128765708 30.648347391977964 21.05461353072818 31 25.57755207436736 26.126484765019796 26.581167154415564 21.71479600619728 32 26.72275778963677 25.91646582888621 26.487132036495094 20.873644344981926 33 24.937596832501292 27.12794801170597 26.461525219487005 21.472929936305732 34 20.767989326906523 26.554054054054056 29.435574109140987 23.242382509898434 35 21.489068686520916 26.863918058185575 29.50034429333792 22.146668961955587 36 25.698485109313136 26.97624375968325 26.479385436391805 20.84588569461181 37 22.3853072818041 29.44611809261491 27.47159579962128 20.696978825959718 38 22.302461697366155 29.44267515923567 26.08172663108969 22.173136512308485 39 22.23769151316922 29.32905835772078 26.155749698743332 22.277500430366672 40 24.26213634016182 26.311972800826304 26.46496815286624 22.960922706145638 41 20.27995352039938 25.573463590979518 27.40661043208814 26.739972456532968 42 22.07651919435359 27.346359097951456 25.261017386813567 25.31610432088139 43 22.23317266310897 26.752237906696507 26.754174556722326 24.260414873472197 44 21.96118092614908 28.0194525735927 27.280943363745912 22.73842313651231 45 20.49190910655879 29.682604579101397 25.500731623343086 24.32475469099673 46 21.8839301084524 28.85759166810122 26.662291272163884 22.596186951282494 47 21.912979858839734 26.852943708039252 28.24130659321742 22.9927698399036 48 23.039894990531934 24.562747460836633 28.964968152866245 23.432389395765192 49 21.321656050955415 25.03959373386125 29.499913926665517 24.13883628851782 50 20.632423825098982 28.254002410053364 28.28886211051816 22.824711654329487 51 19.994405233258735 28.941297985883974 27.1303150284042 23.93398175245309 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 128.0 1 303.5 2 479.0 3 2701.0 4 4923.0 5 3462.5 6 2002.0 7 1984.0 8 1966.0 9 2052.0 10 2138.0 11 2123.0 12 2108.0 13 2056.5 14 2005.0 15 1946.5 16 1888.0 17 1829.0 18 1770.0 19 1684.5 20 1599.0 21 1621.5 22 1644.0 23 1858.5 24 2073.0 25 2330.5 26 3033.5 27 3479.0 28 4339.0 29 5199.0 30 5972.5 31 6746.0 32 8143.0 33 9540.0 34 11482.0 35 13424.0 36 14176.5 37 14929.0 38 16591.0 39 18253.0 40 22109.0 41 25965.0 42 29883.5 43 33802.0 44 35412.5 45 37023.0 46 36818.5 47 36614.0 48 35381.0 49 34148.0 50 33154.0 51 32160.0 52 31077.0 53 29994.0 54 28334.5 55 26675.0 56 25377.5 57 24080.0 58 22730.5 59 21381.0 60 20159.5 61 18938.0 62 16584.0 63 14230.0 64 12339.5 65 10449.0 66 8689.0 67 6929.0 68 5788.0 69 4647.0 70 4044.5 71 3442.0 72 2804.0 73 2166.0 74 1767.0 75 1116.0 76 864.0 77 657.0 78 450.0 79 355.0 80 260.0 81 203.0 82 146.0 83 103.0 84 60.0 85 47.0 86 34.0 87 22.5 88 11.0 89 7.0 90 3.0 91 1.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 464720.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.45417912202019 #Duplication Level Percentage of deduplicated Percentage of total 1 66.66586049305576 22.969174987513526 2 7.469005235606932 5.146768885018157 3 4.45926572572667 4.609210202006161 4 3.3625596150569357 4.634169251425717 5 2.7870229206842585 4.801229346321565 6 2.341170783732775 4.839787052278165 7 2.0754130589172326 5.005465729887993 8 1.7780817743734068 4.900987835828867 9 1.5213966205984204 4.717662451356076 >10 7.515725323872595 36.915729220442564 >50 0.017588629602562703 0.41727552158814996 >100 0.005653488086538012 0.3512646117933441 >500 6.281653429486679E-4 0.10843103543343524 >1k 6.281653429486679E-4 0.5828438691062696 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2693 0.579488724393183 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 501 0.10780685143742469 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 476 0.10242726803236357 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.03722671716302289 0.0 2 0.0 0.0 0.0 0.11404716818729557 0.0 3 0.0 0.0 0.0 0.18505766913410227 0.0 4 0.0 0.0 0.0 0.29673782062317094 0.0 5 0.0 0.0 0.0 0.5308572904114306 0.0 6 0.0 0.0 0.0 0.9780082630401101 0.0 7 0.0 0.0 0.0 1.2411774832156999 0.0 8 0.0 0.0 0.0 1.7683766569116888 0.0 9 0.0 0.0 0.0 2.088569461180926 0.0 10 0.0 0.0 0.0 2.4324324324324325 0.0 11 0.0 0.0 0.0 2.737777586503701 0.0 12 0.0 0.0 0.0 2.9647960061972802 0.0 13 0.0 0.0 0.0 3.083792391117232 0.0 14 0.0 0.0 0.0 3.1517903253572044 0.0 15 0.0 0.0 0.0 3.2101050094680668 0.0 16 0.0 0.0 0.0 3.321354794284731 0.0 17 0.0 0.0 0.0 3.4627302461697367 0.0 18 0.0 0.0 0.0 3.63380099845068 0.0 19 0.0 0.0 0.0 3.7454811499397485 0.0 20 0.0 0.0 0.0 3.8556550180754003 0.0 21 0.0 0.0 0.0 3.997676019969014 0.0 22 0.0 0.0 0.0 4.16724048889654 0.0 23 0.0 0.0 0.0 4.359399208125323 0.0 24 0.0 0.0 0.0 4.499268376656912 0.0 25 0.0 0.0 0.0 4.621922878292305 0.0 26 0.0 0.0 0.0 4.7435014632466865 0.0 27 0.0 0.0 0.0 4.872181098295748 0.0 28 0.0 0.0 0.0 5.001075916681012 0.0 29 0.0 0.0 0.0 5.14783095197108 0.0 30 0.0 0.0 0.0 5.333534171113789 0.0 31 0.0 0.0 0.0 5.492339473231193 0.0 32 0.0 0.0 0.0 5.6451196419349285 0.0 33 0.0 0.0 0.0 5.791229127216388 0.0 34 0.0 0.0 0.0 5.959932862799105 0.0 35 0.0 0.0 0.0 6.166724048889654 0.0 36 0.0 0.0 0.0 6.335642967808573 0.0 37 0.0 0.0 0.0 6.509295920123946 0.0 38 0.0 0.0 0.0 6.702960922706145 0.0 39 0.0 0.0 0.0 6.929764159063522 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGGTCA 20 7.028944E-4 45.0 6 ACCGCGA 20 7.028944E-4 45.0 12 GCGTAAG 25 3.8872065E-5 45.0 1 TCACGTA 20 7.028944E-4 45.0 31 GCGATGT 85 0.0 42.35294 9 TAGGGCG 235 0.0 42.12766 5 CGTTTTT 1935 0.0 42.09302 1 AGGGCGA 545 0.0 41.697247 6 CGGGTAT 50 1.0786607E-9 40.5 6 TAGGGTA 185 0.0 40.135136 5 CGTCATA 125 0.0 39.600002 38 GGGCGAT 1050 0.0 39.428574 7 ACGTAGG 40 3.4522964E-7 39.375 2 CGTTAGG 75 0.0 39.0 2 TACGGGA 110 0.0 38.863636 4 ATTACGG 35 6.240258E-6 38.57143 2 TGCGGGT 105 0.0 38.57143 4 TCTAGCG 35 6.240258E-6 38.57143 1 CGATAAT 35 6.240258E-6 38.57143 10 ATACTAT 345 0.0 38.47826 45 >>END_MODULE