##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545379_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 6904211 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.2142861798401 31.0 31.0 33.0 30.0 34.0 2 31.572755235898786 31.0 31.0 34.0 30.0 34.0 3 31.74885501036976 31.0 31.0 34.0 30.0 34.0 4 35.52442516603273 37.0 35.0 37.0 33.0 37.0 5 35.42957363267142 37.0 35.0 37.0 33.0 37.0 6 35.483247687534465 37.0 35.0 37.0 33.0 37.0 7 35.88412810674529 37.0 35.0 37.0 35.0 37.0 8 35.93791933647451 37.0 35.0 37.0 35.0 37.0 9 37.825406262931416 39.0 37.0 39.0 35.0 39.0 10 37.14775794076977 39.0 37.0 39.0 33.0 39.0 11 36.77285239399549 39.0 35.0 39.0 32.0 39.0 12 36.019335011632755 37.0 35.0 39.0 32.0 39.0 13 35.69622770798865 37.0 35.0 39.0 31.0 39.0 14 36.661154909663104 38.0 35.0 41.0 31.0 41.0 15 36.91073867817771 38.0 35.0 41.0 32.0 41.0 16 37.005324142034475 38.0 35.0 41.0 32.0 41.0 17 36.930384224931714 38.0 35.0 41.0 32.0 41.0 18 36.89739812413033 38.0 35.0 41.0 32.0 41.0 19 36.86347361052552 38.0 35.0 41.0 32.0 41.0 20 36.75778579188846 38.0 35.0 41.0 31.0 41.0 21 36.62617567742353 38.0 35.0 40.0 31.0 41.0 22 36.51575639852258 38.0 35.0 40.0 31.0 41.0 23 36.43517181036327 38.0 35.0 40.0 31.0 41.0 24 36.3542711831953 38.0 35.0 40.0 31.0 41.0 25 36.229269933957696 38.0 35.0 40.0 30.0 41.0 26 36.06183907183601 38.0 35.0 40.0 30.0 41.0 27 35.939100354841415 38.0 34.0 40.0 30.0 41.0 28 35.88611906559635 37.0 35.0 40.0 30.0 41.0 29 36.02182305842043 37.0 35.0 40.0 30.0 41.0 30 36.0170203372985 37.0 35.0 40.0 30.0 41.0 31 35.916735308350226 37.0 35.0 40.0 30.0 41.0 32 35.7880970034085 37.0 34.0 40.0 30.0 41.0 33 35.63380855538743 37.0 34.0 40.0 29.0 41.0 34 35.49902878113082 37.0 34.0 40.0 29.0 41.0 35 35.38736040946605 37.0 34.0 40.0 29.0 41.0 36 35.25024032434698 37.0 34.0 40.0 27.0 41.0 37 35.14849777910901 37.0 34.0 40.0 27.0 41.0 38 35.09834244637077 37.0 34.0 40.0 27.0 41.0 39 35.05763728831578 37.0 34.0 40.0 27.0 41.0 40 34.91811185955933 36.0 34.0 40.0 26.0 41.0 41 34.87980422382804 36.0 34.0 40.0 26.0 41.0 42 34.833210485600745 36.0 34.0 40.0 26.0 41.0 43 34.7189361680864 36.0 33.0 40.0 26.0 41.0 44 34.609478186573384 36.0 33.0 40.0 26.0 41.0 45 34.572438327855274 36.0 33.0 40.0 26.0 41.0 46 34.578646133497365 36.0 33.0 40.0 26.0 41.0 47 34.54526824281587 35.0 33.0 40.0 26.0 41.0 48 34.48002255435125 35.0 33.0 40.0 26.0 41.0 49 34.45954823802459 36.0 33.0 40.0 26.0 41.0 50 34.32988345808087 35.0 33.0 40.0 26.0 41.0 51 34.095739686982334 35.0 33.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 5.0 10 4.0 11 8.0 12 13.0 13 29.0 14 71.0 15 146.0 16 532.0 17 1246.0 18 2767.0 19 5486.0 20 9538.0 21 15708.0 22 23936.0 23 34930.0 24 50617.0 25 71144.0 26 94242.0 27 113685.0 28 130795.0 29 154880.0 30 188554.0 31 233365.0 32 291978.0 33 379449.0 34 645392.0 35 945206.0 36 519899.0 37 639810.0 38 899662.0 39 1450247.0 40 866.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.03401199644681 24.29349276839888 29.20368453397499 12.468810701179324 2 29.51162703457354 26.440457859703304 30.35165060859235 13.696264497130809 3 29.26608123650914 26.025826846833038 30.692413658852548 14.015678257805272 4 26.490224589022553 27.92907111326696 30.215748041304067 15.364956256406417 5 23.63644448293947 32.50947863557472 28.772599794531196 15.081477086954614 6 22.091097737308434 41.48337876695831 25.668465230856935 10.757058264876319 7 89.13499312231332 4.042663238420726 5.161299386707619 1.6610442525583298 8 90.21573935095553 2.9976343422876273 4.878471993396493 1.9081543133603533 9 85.43693117142567 4.903282938484933 6.600073491380839 3.059712398708556 10 49.11696644265362 25.722070197449064 12.604307718868963 12.556655641028353 11 41.16368981191334 22.752259454411227 20.361081085152236 15.7229696485232 12 36.440239152598316 22.204275043158443 25.180241449747122 16.17524435449612 13 22.36999998986126 35.933809091292254 25.493861644726675 16.20232927411981 14 18.454606905843406 37.324004147613685 27.106399268504394 17.11498967803852 15 17.805293030586697 23.97890215116543 42.0518868846853 16.163917933562573 16 19.179888911274585 19.863587598930565 40.75183971057663 20.204683779218218 17 19.310142752010332 20.71955796252461 27.549520140679363 32.4207791447857 18 23.41847605758283 23.40764208973335 31.508480838722917 21.6654010139609 19 29.113536651762235 25.22157854098028 24.154331320407213 21.510553486850274 20 31.261776327519534 24.084431950298157 23.614037867614417 21.039753854567884 21 24.63170664975332 27.68597309670866 26.15841259776099 21.523907655777034 22 24.677084753058676 24.242161776342 24.34549002051067 26.73526345008865 23 22.103771162266042 30.254144897947064 23.706517660019372 23.935566279767524 24 22.460625841243846 24.754052273315516 33.60999540715079 19.175326478289843 25 20.383183538278303 26.134427235784074 31.68924008840402 21.7931491375336 26 20.383560120048475 31.87180982736478 25.509851886044615 22.234778166542128 27 21.120183030327432 29.918480185498385 26.893934730557916 22.067402053616263 28 18.432996905801403 27.713564953330653 34.054883316862714 19.798554824005237 29 19.17206759758646 24.203620080556636 33.74947550125568 22.874836820601224 30 21.410006154215157 28.47605613443737 29.024359191803377 21.089578519544087 31 28.088017588106734 25.933767087940968 24.22113113286949 21.757084191082804 32 28.962585297581434 26.77061868474182 24.66572936429666 19.60106665338009 33 27.009371527028943 26.482446727077143 24.976134130315543 21.532047615578374 34 21.262458519880116 26.11691618347122 28.21363657628656 24.40698872036211 35 21.227103285226942 25.347921724871963 30.12392002503979 23.3010549648613 36 29.061061430480617 25.218145853306044 25.51952714075511 20.201265575458223 37 22.481091612061103 29.577963361780224 27.397120395074833 20.54382463108384 38 22.486696886870924 30.316787827023244 24.94460264902101 22.251912637084818 39 22.126452971961605 29.466900707408854 26.20729580831177 22.19935051231777 40 24.223115429119996 25.425483085612534 26.024436391066263 24.326965094201206 41 19.55912123774896 24.255733203982324 26.647389542411148 29.537756015857568 42 22.63708336839648 26.255063757466278 24.63709466584958 26.470758208287666 43 22.475718079879076 26.18386083507587 26.17564845570334 25.164772629341712 44 21.90271994873853 28.5516187150132 26.985299261566603 22.56036207468167 45 19.939917826960965 31.744177575105976 23.587604724131403 24.728299873801653 46 22.42041849532119 29.729479588616282 26.139887671451522 21.710214244611006 47 23.04195222307082 25.675562348833196 27.0429742080594 24.239511220036583 48 23.370273591001204 23.16366055440658 29.88967168008046 23.57639417451176 49 21.98313464058384 23.547730508236207 30.342250548252363 24.12688430292759 50 20.374768384106453 29.99139220976879 26.620652236729146 23.013187169395604 51 20.383444248734577 31.018591407475814 24.427367587693947 24.170596756095662 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1863.0 1 4675.0 2 7487.0 3 18684.0 4 29881.0 5 22716.5 6 15552.0 7 16005.0 8 16458.0 9 17252.0 10 18046.0 11 18788.0 12 19530.0 13 19803.5 14 20077.0 15 19302.5 16 18528.0 17 18465.0 18 18402.0 19 17661.5 20 16921.0 21 19073.0 22 21225.0 23 21206.5 24 21188.0 25 26870.0 26 37095.5 27 41639.0 28 49858.0 29 58077.0 30 72954.0 31 87831.0 32 101112.5 33 114394.0 34 137501.0 35 160608.0 36 174939.5 37 189271.0 38 225477.0 39 261683.0 40 342650.0 41 423617.0 42 511570.0 43 599523.0 44 633452.5 45 667382.0 46 650086.0 47 632790.0 48 603104.0 49 573418.0 50 540502.5 51 507587.0 52 475296.0 53 443005.0 54 410339.0 55 377673.0 56 351328.5 57 324984.0 58 302746.5 59 280509.0 60 259116.0 61 237723.0 62 218422.0 63 199121.0 64 174691.0 65 150261.0 66 128729.5 67 107198.0 68 91799.0 69 76400.0 70 63129.0 71 49858.0 72 41419.0 73 32980.0 74 27467.5 75 17768.0 76 13581.0 77 10317.5 78 7054.0 79 5164.5 80 3275.0 81 2503.5 82 1732.0 83 1285.5 84 839.0 85 560.5 86 282.0 87 192.0 88 102.0 89 100.5 90 99.0 91 62.5 92 26.0 93 17.5 94 9.0 95 11.0 96 13.0 97 7.0 98 1.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 6904211.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 15.34059025634209 #Duplication Level Percentage of deduplicated Percentage of total 1 76.52324342683143 11.739117224973441 2 10.308545077718811 3.162783323526328 3 3.7241794654543288 1.713933336618539 4 1.7598830626593307 1.0799057985333282 5 1.0434757665215297 0.8003767088314637 6 0.6720186523086801 0.6185497673812008 7 0.4743654242530912 0.5093931923669787 8 0.33864250578871574 0.41559807397485143 9 0.2676564951165548 0.3695407758928526 >10 2.254416573815844 7.663902348182415 >50 0.7572406694632322 8.56815522204039 >100 1.843902364816528 58.94292004615295 >500 0.027089018622368552 2.7003159287868885 >1k 0.005055345024480194 1.1758342901190213 >5k 9.538386838641875E-5 0.08276112826244038 >10k+ 1.907677367728375E-4 0.4569128343569596 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 15989 0.23158330473967265 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 15237 0.22069140123324735 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.4483914237267661E-5 0.0 0.0 0.05288077088026423 0.0 2 1.4483914237267661E-5 0.0 0.0 0.18314909553024958 0.0 3 1.4483914237267661E-5 0.0 0.0 0.2847247860762077 0.0 4 1.4483914237267661E-5 0.0 0.0 0.49398837897625086 0.0 5 1.4483914237267661E-5 0.0 0.0 0.8624736410865774 0.0 6 1.4483914237267661E-5 0.0 0.0 1.3190355856737286 0.0 7 1.4483914237267661E-5 0.0 0.0 1.5590050767567794 0.0 8 1.4483914237267661E-5 0.0 0.0 2.150716425091875 0.0 9 1.4483914237267661E-5 0.0 0.0 2.4092832620555775 0.0 10 1.4483914237267661E-5 0.0 0.0 2.7913689196346985 0.0 11 1.4483914237267661E-5 0.0 0.0 3.215211701959862 0.0 12 1.4483914237267661E-5 0.0 0.0 3.5651430699322484 0.0 13 1.4483914237267661E-5 0.0 0.0 3.711807185498821 0.0 14 1.4483914237267661E-5 0.0 0.0 3.77250927006721 0.0 15 1.4483914237267661E-5 0.0 0.0 3.86368551019081 0.0 16 1.4483914237267661E-5 0.0 0.0 4.06050742076104 0.0 17 1.4483914237267661E-5 0.0 0.0 4.294263312636303 0.0 18 1.4483914237267661E-5 0.0 0.0 4.579393648311154 1.4483914237267661E-5 19 2.8967828474535322E-5 0.0 0.0 4.739991289373978 1.4483914237267661E-5 20 2.8967828474535322E-5 0.0 0.0 4.90457200685205 1.4483914237267661E-5 21 2.8967828474535322E-5 0.0 0.0 5.1294058075571565 1.4483914237267661E-5 22 2.8967828474535322E-5 0.0 0.0 5.368665586842581 1.4483914237267661E-5 23 2.8967828474535322E-5 0.0 0.0 5.6425419211550745 1.4483914237267661E-5 24 2.8967828474535322E-5 0.0 0.0 5.854832652130707 1.4483914237267661E-5 25 2.8967828474535322E-5 0.0 0.0 6.030884629684695 1.4483914237267661E-5 26 2.8967828474535322E-5 0.0 0.0 6.197159965128528 1.4483914237267661E-5 27 2.8967828474535322E-5 0.0 0.0 6.359915709412705 1.4483914237267661E-5 28 2.8967828474535322E-5 0.0 0.0 6.534736554256526 1.4483914237267661E-5 29 2.8967828474535322E-5 0.0 0.0 6.727372613612185 1.4483914237267661E-5 30 2.8967828474535322E-5 0.0 0.0 6.964257030962698 1.4483914237267661E-5 31 2.8967828474535322E-5 0.0 0.0 7.181631615835611 1.4483914237267661E-5 32 2.8967828474535322E-5 0.0 0.0 7.386926616234643 1.4483914237267661E-5 33 2.8967828474535322E-5 0.0 0.0 7.59314858714486 1.4483914237267661E-5 34 2.8967828474535322E-5 0.0 0.0 7.816084995084884 1.4483914237267661E-5 35 2.8967828474535322E-5 0.0 0.0 8.091569043877715 1.4483914237267661E-5 36 2.8967828474535322E-5 0.0 0.0 8.321689473279424 1.4483914237267661E-5 37 2.8967828474535322E-5 0.0 0.0 8.550520834314016 1.4483914237267661E-5 38 2.8967828474535322E-5 0.0 0.0 8.77710718864183 1.4483914237267661E-5 39 2.8967828474535322E-5 0.0 0.0 9.012992215909971 1.4483914237267661E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGATCG 120 0.0 41.249996 9 TCGTTAG 270 0.0 40.833336 1 ATTACGC 45 1.9306754E-8 40.0 16 TACGGGA 1930 0.0 39.98705 4 TGCGTAA 40 3.4615732E-7 39.375 34 CGTTTTT 14525 0.0 38.323578 1 ACCGTTG 130 0.0 38.07692 10 GCGATAT 825 0.0 37.636364 9 TAATGCG 360 0.0 37.5 1 GGGCGAT 15950 0.0 37.481194 7 ACGGGTA 480 0.0 37.031246 5 ACGGGAT 2325 0.0 36.870968 5 CGACCCG 1160 0.0 36.853447 32 GGCGATA 3200 0.0 36.632816 8 AGGGCGA 7690 0.0 36.485695 6 CGTAAGG 920 0.0 36.195656 2 TAGGGAT 7915 0.0 36.073914 5 CTATACG 125 0.0 36.000004 1 GACCGAT 4005 0.0 35.898876 9 TCACGAC 415 0.0 35.783134 25 >>END_MODULE