##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545375_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3701604 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.26909199363303 31.0 31.0 33.0 30.0 34.0 2 31.632425294547986 31.0 31.0 34.0 30.0 34.0 3 31.82507313045912 31.0 31.0 34.0 30.0 34.0 4 35.59103972223933 37.0 35.0 37.0 33.0 37.0 5 35.51147961802505 37.0 35.0 37.0 33.0 37.0 6 35.55612972106147 37.0 35.0 37.0 33.0 37.0 7 35.89180014934067 37.0 35.0 37.0 35.0 37.0 8 35.93349288578681 37.0 35.0 37.0 35.0 37.0 9 37.84003853464606 39.0 38.0 39.0 35.0 39.0 10 37.24802815212 39.0 37.0 39.0 34.0 39.0 11 36.85303425217825 39.0 35.0 39.0 33.0 39.0 12 35.84323903907603 37.0 35.0 39.0 32.0 39.0 13 35.343159073742086 37.0 35.0 39.0 30.0 39.0 14 36.25082045513243 38.0 35.0 41.0 31.0 41.0 15 36.6040270650237 38.0 35.0 41.0 31.0 41.0 16 36.780055619131595 38.0 35.0 41.0 32.0 41.0 17 36.74326211015549 38.0 35.0 41.0 32.0 41.0 18 36.6988327222469 38.0 35.0 40.0 32.0 41.0 19 36.65025486248664 38.0 35.0 40.0 32.0 41.0 20 36.50934621855823 38.0 35.0 40.0 31.0 41.0 21 36.37135955115674 37.0 35.0 40.0 31.0 41.0 22 36.22845339479858 37.0 35.0 40.0 31.0 41.0 23 36.177125916224426 37.0 35.0 40.0 31.0 41.0 24 36.088597807869235 37.0 35.0 40.0 31.0 41.0 25 35.9507454065859 36.0 35.0 40.0 31.0 41.0 26 35.78002806350977 36.0 34.0 40.0 30.0 41.0 27 35.66666531590089 36.0 34.0 40.0 30.0 41.0 28 35.63985909892036 36.0 34.0 40.0 30.0 41.0 29 35.78642312900029 36.0 35.0 40.0 30.0 41.0 30 35.80064047910041 36.0 35.0 40.0 30.0 41.0 31 35.66114230479543 36.0 34.0 40.0 30.0 41.0 32 35.52693859202659 36.0 34.0 40.0 30.0 41.0 33 35.36471783583549 36.0 34.0 40.0 29.0 41.0 34 35.249052843037774 36.0 34.0 40.0 29.0 41.0 35 35.0970001113031 36.0 34.0 40.0 28.0 41.0 36 34.912239937065124 36.0 34.0 40.0 27.0 41.0 37 34.80070585616398 36.0 34.0 40.0 27.0 41.0 38 34.77798219366523 35.0 33.0 40.0 27.0 41.0 39 34.73935704629669 35.0 34.0 40.0 27.0 41.0 40 34.562547209263876 35.0 33.0 40.0 26.0 41.0 41 34.543575703938075 35.0 34.0 40.0 26.0 41.0 42 34.510490857476924 35.0 33.0 40.0 26.0 41.0 43 34.376492461106054 35.0 33.0 40.0 26.0 41.0 44 34.26439078842577 35.0 33.0 40.0 26.0 41.0 45 34.23639427664332 35.0 33.0 39.0 26.0 41.0 46 34.25749350821968 35.0 33.0 39.0 26.0 41.0 47 34.225902068400615 35.0 33.0 39.0 26.0 41.0 48 34.17421879812103 35.0 33.0 39.0 26.0 41.0 49 34.14686254931646 35.0 33.0 39.0 26.0 41.0 50 34.008198878107976 35.0 33.0 39.0 26.0 41.0 51 33.76826343390595 35.0 33.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 4.0 10 4.0 11 7.0 12 11.0 13 14.0 14 35.0 15 105.0 16 304.0 17 745.0 18 1546.0 19 3148.0 20 5519.0 21 8797.0 22 13041.0 23 19165.0 24 27231.0 25 38669.0 26 51174.0 27 62329.0 28 71873.0 29 84628.0 30 102660.0 31 127994.0 32 163106.0 33 216799.0 34 396648.0 35 602497.0 36 265147.0 37 319323.0 38 439360.0 39 679283.0 40 438.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.597921333562425 24.416036939661833 29.15773810488642 12.828303621889322 2 29.640123578859328 26.02363732046972 30.708984537514006 13.627254563156946 3 29.98691918422392 25.821967990092944 29.94685547130379 14.244257354379345 4 26.098496759783057 28.073559462330383 30.394121035097214 15.43382274278934 5 24.229090956244914 33.468761110048504 28.027201180893474 14.274946752813106 6 22.47050197698079 41.41496497194189 25.442808036732185 10.671725014345132 7 88.42334296159179 4.59149601091851 5.219791204029389 1.7653698234603161 8 89.9525989273839 3.0591062685257526 4.9162471188165995 2.0720476852737355 9 85.69366145054954 4.548136429504615 6.853839578733976 2.9043625412118637 10 56.48732279303783 19.133840356775064 12.192471155747617 12.186365694439491 11 48.69775373054492 20.030829878074478 16.318871494627736 14.952544896752867 12 42.55798297170632 20.643510218813248 22.099932893956243 14.698573915524188 13 23.03036737587273 39.07762688823548 22.316784831656765 15.57522090423503 14 17.188548531933723 41.85061395006057 25.58077525310649 15.380062264899216 15 16.08583738292913 21.81230082958631 46.923198699806896 15.178663087677666 16 17.163748472283906 16.25865435632769 45.86838570522401 20.709211466164398 17 18.34820796606012 17.033777789304313 27.360841408211144 37.257172836424424 18 22.544929171245762 22.385754932186156 32.39274109278032 22.676574803787762 19 31.73716043099154 22.310328171246844 23.90277296004651 22.04973843771511 20 33.871640510438176 21.865845184952253 22.155071152938024 22.107443151671546 21 24.67168287045292 26.78611758578173 25.390479370564762 23.15172017320059 22 24.730711334869966 24.458126801246163 22.76172707831524 28.049434785568632 23 22.25527095821163 29.806375830585875 22.552736597431817 25.38561661377068 24 22.826401743676524 23.049034958898897 34.83722191784967 19.28734137957491 25 19.83442853422462 23.439028053784252 33.80377803784522 22.92276537414591 26 18.83421349231306 31.909491128710687 26.073939837972944 23.182355541003304 27 20.8899439270111 30.579959390577706 26.990569493657347 21.539527188753848 28 17.097723041146487 27.632048160743288 36.03994376491921 19.230285033191016 29 17.505113999228442 23.8915616041046 35.2952125619056 23.308111834761363 30 20.523778340416747 28.09220003004103 29.441858178238405 21.942163451303813 31 29.185888063661054 25.708125450480384 22.426358951416738 22.679627534441828 32 31.15814117339402 25.397395291338565 24.002783658111458 19.441679877155956 33 28.88523461720919 26.42046529018231 23.622975337178154 21.07132475543035 34 21.100150097093042 25.93697218827298 27.44388648812785 25.51899122650613 35 21.63583678859219 24.54127994242496 29.810374097283233 24.01250917169962 36 31.266040343591587 23.71912284512336 24.772612089245634 20.242224722039417 37 22.54682024333235 30.388285726944318 27.079530927673517 19.985363102049813 38 22.58628961931098 31.717925526339393 22.136619692436035 23.559165161913594 39 22.06994589372607 30.349329641960622 25.27809565799043 22.30262880632288 40 24.724849011401545 24.759995936896544 24.25859168079568 26.256563370906232 41 18.61128310861994 22.778233436099594 25.81072961883551 32.79975383644496 42 22.881161788240988 26.035172860197903 23.025207450607898 28.05845790095321 43 22.574943186791455 26.105547757134474 25.361329845115794 25.958179210958278 44 21.662230751857845 28.832878935726242 26.22203779766825 23.28285251474766 45 19.076243704080717 33.31342304579312 22.232740185065715 25.377593065060445 46 22.70167203190833 30.719682602460985 25.456018526022774 21.12262683960791 47 23.145830834416646 25.29932969599125 26.903823315514032 24.65101615407807 48 24.35957493021944 22.028315292505628 28.913006361566502 24.699103415708436 49 21.73582047134161 21.892914531105976 31.19520618629113 25.17605881126128 50 20.1293817491012 30.38091054580663 26.081693233527954 23.408014471564222 51 19.81803023770236 32.31790866878251 22.48530636988722 25.378754723627917 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1306.0 1 2792.0 2 4278.0 3 9897.0 4 15516.0 5 11881.0 6 8246.0 7 8554.0 8 8862.0 9 9416.5 10 9971.0 11 10054.0 12 10137.0 13 10004.0 14 9871.0 15 10122.5 16 10374.0 17 9635.0 18 8896.0 19 8859.0 20 8822.0 21 8640.5 22 8459.0 23 9661.0 24 10863.0 25 13107.0 26 16503.5 27 17656.0 28 23739.0 29 29822.0 30 32527.5 31 35233.0 32 41821.5 33 48410.0 34 54844.0 35 61278.0 36 66198.0 37 71118.0 38 94371.0 39 117624.0 40 170954.5 41 224285.0 42 286678.0 43 349071.0 44 361690.5 45 374310.0 46 351799.0 47 329288.0 48 302897.5 49 276507.0 50 266352.5 51 256198.0 52 246613.0 53 237028.0 54 219890.0 55 202752.0 56 192001.5 57 181251.0 58 175091.0 59 168931.0 60 165165.0 61 161399.0 62 146510.5 63 131622.0 64 114672.5 65 97723.0 66 82938.0 67 68153.0 68 57572.5 69 46992.0 70 39122.0 71 31252.0 72 25739.0 73 20226.0 74 17782.0 75 11682.5 76 8027.0 77 6579.0 78 5131.0 79 3629.0 80 2127.0 81 1640.5 82 1154.0 83 742.5 84 331.0 85 285.5 86 240.0 87 160.0 88 80.0 89 66.5 90 53.0 91 39.5 92 26.0 93 19.0 94 12.0 95 8.0 96 4.0 97 2.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3701604.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 14.818698335618077 #Duplication Level Percentage of deduplicated Percentage of total 1 78.82190813711597 11.680380789217216 2 9.182877455035989 2.7215658171825314 3 3.0511745127746246 1.3564330402240088 4 1.403465504164651 0.8319012772264841 5 0.8091012341994772 0.5994913556289162 6 0.5310091796479905 0.472131890798856 7 0.3431781690173493 0.35598176334264975 8 0.2754929082299856 0.3265957040529818 9 0.21398046603467025 0.2853820778294474 >10 2.0603420140087967 7.168234695002986 >50 1.0274740357059056 11.272178377087467 >100 2.254759301371814 59.66645484391708 >500 0.022105473891363376 2.1119264247722445 >1k 0.002763184236420422 0.6210536681487131 >5k 1.8421228242802815E-4 0.2189834524147939 >10k+ 1.8421228242802815E-4 0.31130482315361624 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 11404 0.30808265822059844 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8022 0.21671686112290778 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.05343629410385336 0.0 2 0.0 0.0 0.0 0.20985497098014808 0.0 3 0.0 0.0 0.0 0.31451230331499536 0.0 4 0.0 0.0 0.0 0.5223681409464653 0.0 5 0.0 0.0 0.0 0.8554399660255392 0.0 6 0.0 0.0 0.0 1.2219027210906408 0.0 7 0.0 0.0 0.0 1.4221132244291934 0.0 8 0.0 0.0 0.0 1.912008956117402 0.0 9 0.0 0.0 0.0 2.094416366526511 0.0 10 0.0 0.0 0.0 2.3907473624947455 0.0 11 0.0 0.0 0.0 2.7404876372513107 0.0 12 0.0 0.0 0.0 3.0237432205065695 0.0 13 0.0 0.0 0.0 3.1399631078851225 0.0 14 0.0 0.0 0.0 3.187104833472192 0.0 15 0.0 0.0 0.0 3.2669080755261772 0.0 16 0.0 0.0 0.0 3.444587805718818 0.0 17 2.7015315522676117E-5 0.0 0.0 3.641529455879127 0.0 18 2.7015315522676117E-5 0.0 0.0 3.9123309786784324 0.0 19 2.7015315522676117E-5 0.0 0.0 4.0351155877289955 0.0 20 2.7015315522676117E-5 0.0 0.0 4.167085404057268 0.0 21 2.7015315522676117E-5 0.0 0.0 4.350411335194148 0.0 22 2.7015315522676117E-5 0.0 0.0 4.528982570799037 0.0 23 2.7015315522676117E-5 0.0 0.0 4.740755629181296 0.0 24 2.7015315522676117E-5 0.0 0.0 4.901226603385991 0.0 25 2.7015315522676117E-5 0.0 0.0 5.025659146683438 0.0 26 2.7015315522676117E-5 0.0 0.0 5.151712608912245 0.0 27 2.7015315522676117E-5 0.0 0.0 5.269256246751408 0.0 28 2.7015315522676117E-5 0.0 0.0 5.3958500152906685 0.0 29 2.7015315522676117E-5 0.0 0.0 5.5264150352117625 0.0 30 2.7015315522676117E-5 0.0 0.0 5.69931305455689 0.0 31 2.7015315522676117E-5 0.0 0.0 5.866132627909415 0.0 32 2.7015315522676117E-5 0.0 0.0 6.013933419133975 0.0 33 2.7015315522676117E-5 0.0 0.0 6.16611069147321 0.0 34 2.7015315522676117E-5 0.0 0.0 6.325852252158794 0.0 35 2.7015315522676117E-5 0.0 0.0 6.532249262752039 0.0 36 2.7015315522676117E-5 0.0 0.0 6.700203479356516 0.0 37 2.7015315522676117E-5 0.0 0.0 6.875262723943458 0.0 38 2.7015315522676117E-5 0.0 0.0 7.037732831496832 0.0 39 2.7015315522676117E-5 0.0 0.0 7.20730796703267 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAATACG 80 0.0 45.000004 1 GACCGAA 20 7.035318E-4 45.000004 8 TACGATC 50 2.1827873E-11 45.0 11 CGGTAAT 25 3.8924907E-5 45.0 6 ATACCGG 45 3.8562575E-10 45.0 2 CTAGCGA 25 3.8924907E-5 45.0 16 TTCGATC 30 2.1668147E-6 44.999996 17 CTCGGTA 75 0.0 42.0 21 TACACGG 220 0.0 41.93182 2 TCGGAAT 55 6.184564E-11 40.909092 30 TGCGATA 50 1.0822987E-9 40.5 1 CGTTTAG 100 0.0 40.5 30 TATCACG 95 0.0 40.263157 1 TATCGTT 45 1.9303116E-8 40.0 32 ATCTACG 40 3.460991E-7 39.375004 24 ACCGTAC 40 3.460991E-7 39.375004 14 ATACGCC 80 0.0 39.375004 19 CGTATGG 390 0.0 39.23077 2 ATTGGGC 800 0.0 39.09375 4 TAGCATA 1100 0.0 39.068184 30 >>END_MODULE