SRR1545374_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545374_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	222502
Sequences flagged as poor quality	0
Sequence length	51
%GC	52

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1080	0.4853888953807157	No Hit
GCTCAACTTGACCCTGCATTAGAAATTGAAGACTGTAAATACAAAATAAAA	432	0.19415555815228627	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTCTATA	30	2.157587E-6	45.000004	38
AGGCCGA	30	2.157587E-6	45.000004	29
AGATTTG	30	2.157587E-6	45.000004	1
TATAAGG	30	2.157587E-6	45.000004	2
AGCCGTT	35	1.2060264E-7	45.0	45
TTGTCAG	20	7.0210156E-4	45.0	1
TAAACGG	20	7.0210156E-4	45.0	2
CGACCCG	20	7.0210156E-4	45.0	32
TAACGGG	40	6.7720975E-9	45.0	3
CGACAAT	20	7.0210156E-4	45.0	20
ACGGGCT	25	3.8806367E-5	45.0	5
GGTATGC	40	6.7720975E-9	45.0	8
GTTCCAC	20	7.0210156E-4	45.0	36
CATACGA	35	1.2060264E-7	45.0	18
GAGTTAC	20	7.0210156E-4	45.0	44
TAGATAG	25	3.8806367E-5	45.0	1
TATACGG	20	7.0210156E-4	45.0	2
TAGTAAG	20	7.0210156E-4	45.0	1
TAAGTAG	60	3.6379788E-12	41.250004	1
CGTTTTT	755	0.0	40.827816	1