##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545371_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 4946234 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.17622659987376 31.0 31.0 33.0 30.0 33.0 2 31.535360235686383 31.0 31.0 34.0 30.0 34.0 3 31.715451796255493 31.0 31.0 34.0 30.0 34.0 4 35.51186842353192 37.0 35.0 37.0 33.0 37.0 5 35.423069349327186 37.0 35.0 37.0 33.0 37.0 6 35.47690222500594 37.0 35.0 37.0 33.0 37.0 7 35.82989947503495 37.0 35.0 37.0 35.0 37.0 8 35.87212958384096 37.0 35.0 37.0 35.0 37.0 9 37.757667146358216 39.0 37.0 39.0 35.0 39.0 10 37.09140772555443 39.0 37.0 39.0 33.0 39.0 11 36.7599193649148 39.0 35.0 39.0 32.0 39.0 12 36.22492142506804 38.0 35.0 39.0 32.0 39.0 13 36.0023005381468 38.0 35.0 39.0 31.0 39.0 14 37.01369607665145 39.0 35.0 41.0 31.0 41.0 15 37.198306024340944 39.0 35.0 41.0 32.0 41.0 16 37.24001735461768 39.0 35.0 41.0 32.0 41.0 17 37.16078454840592 39.0 35.0 41.0 32.0 41.0 18 37.09913562520495 39.0 35.0 41.0 32.0 41.0 19 37.07842269492305 39.0 35.0 41.0 32.0 41.0 20 36.9696874430122 39.0 35.0 41.0 31.0 41.0 21 36.85312037400576 38.0 35.0 41.0 31.0 41.0 22 36.732048059190085 38.0 35.0 41.0 31.0 41.0 23 36.63028316088563 38.0 35.0 41.0 31.0 41.0 24 36.53614507522288 38.0 35.0 40.0 31.0 41.0 25 36.41618633489641 38.0 35.0 40.0 30.0 41.0 26 36.257027467766385 38.0 35.0 40.0 30.0 41.0 27 36.12799879666025 38.0 35.0 40.0 30.0 41.0 28 36.05051681744131 38.0 35.0 40.0 30.0 41.0 29 36.153977753579795 38.0 35.0 40.0 30.0 41.0 30 36.12855174259851 38.0 35.0 40.0 30.0 41.0 31 36.03459601789968 38.0 35.0 40.0 30.0 41.0 32 35.93111688609961 38.0 35.0 40.0 30.0 41.0 33 35.745373348693164 38.0 34.0 40.0 29.0 41.0 34 35.593492948372436 38.0 34.0 40.0 28.0 41.0 35 35.481827790597855 38.0 34.0 40.0 27.0 41.0 36 35.33468837099094 38.0 34.0 40.0 27.0 41.0 37 35.23585721985656 38.0 34.0 40.0 27.0 41.0 38 35.16098126372509 37.0 34.0 40.0 27.0 41.0 39 35.09260742617515 37.0 34.0 40.0 26.0 41.0 40 34.98390957645756 37.0 34.0 40.0 26.0 41.0 41 34.90903665293636 37.0 34.0 40.0 26.0 41.0 42 34.840443860925305 37.0 34.0 40.0 26.0 41.0 43 34.72098974694687 37.0 33.0 40.0 25.0 41.0 44 34.606953896641365 37.0 33.0 40.0 25.0 41.0 45 34.56448643553863 36.0 33.0 40.0 24.0 41.0 46 34.548889720947294 36.0 33.0 40.0 24.0 41.0 47 34.51260352826009 36.0 33.0 40.0 25.0 41.0 48 34.4334437068687 36.0 33.0 40.0 24.0 41.0 49 34.38040962073367 36.0 33.0 40.0 24.0 41.0 50 34.25909024926843 36.0 33.0 40.0 24.0 41.0 51 34.019628671025266 35.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 9.0 11 6.0 12 13.0 13 13.0 14 47.0 15 148.0 16 401.0 17 1152.0 18 2472.0 19 4686.0 20 8186.0 21 12988.0 22 19138.0 23 27347.0 24 38584.0 25 54066.0 26 70965.0 27 85233.0 28 97123.0 29 111372.0 30 133957.0 31 162564.0 32 200110.0 33 255942.0 34 412926.0 35 559671.0 36 387841.0 37 489921.0 38 693066.0 39 1115780.0 40 505.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.77411299182368 23.816887757433232 28.050896904594484 13.358102346148607 2 31.26914335229591 25.790510517698923 29.43303935883341 13.507306771171764 3 29.81498651297128 25.808301831251818 30.753397433279538 13.62331422249736 4 26.602097676737497 28.114905198581386 30.1800925714392 15.102904553241922 5 24.078076370830818 32.36082239538202 28.378176204360734 15.182925029426428 6 22.23151998065599 41.3381776923615 25.769929202702503 10.660373124280008 7 89.41404713161569 3.6977223479519976 5.1907168160665265 1.6975137043657864 8 90.39077002826798 2.699852049053886 5.073152624805053 1.836225297873089 9 85.22659866071844 4.953728432581232 6.873957034786465 2.945715871913864 10 44.35513968809401 28.829388176944313 13.432259775821361 13.383212359140305 11 35.632564088152726 24.27974495343326 23.207575703050036 16.880115255363982 12 32.56592793628445 22.977865584200018 26.97913200224656 17.47707447726897 13 23.209819834645913 31.139125241547404 27.673781709478362 17.977273214328314 14 20.117264973715358 32.6019957810326 28.68020396932292 18.60053527592912 15 19.707680631365196 24.029635476202703 37.897600477454155 18.36508341497794 16 21.958342448011962 21.651523158831548 36.1576302293826 20.232504163773893 17 21.69114926629027 21.86974979347924 28.31841356474441 28.120687375486074 18 24.291875394492052 23.521531735053376 30.724830244586084 21.461762625868488 19 28.284387677574497 25.136133874782306 25.201395647678616 21.378082799964577 20 30.52457688010717 23.725687058072868 25.131160393948203 20.61857566787176 21 26.128727431819843 26.26780293855891 26.745277316034787 20.858192313586457 22 25.28873482330193 24.2511777647398 26.10026133013521 24.359826081823062 23 23.45485474403354 27.77484850089988 25.83094532122823 22.93935143383835 24 22.581341683389827 24.890290269324094 32.50719638415813 20.021171663127948 25 21.999161382174805 25.946750598536177 29.94294244873979 22.11114557054923 26 21.372199536051063 29.11829484816125 26.77196428636413 22.737541329423557 27 21.616547053778692 27.830587877565033 28.04869320780214 22.504171860854136 28 20.191907621030463 27.30952478188456 31.888099107320844 20.61046848976413 29 20.95400258054916 24.520817252075013 31.485954768820072 23.03922539855575 30 22.77185026021818 27.22841256600476 29.08182265537781 20.91791451839925 31 26.030491076645383 27.19123276415956 25.026090556977287 21.752185602217768 32 27.197540593510134 26.466802824128415 25.098569942303577 21.23708664005787 33 25.655498708714546 27.079289010588663 25.0376953455902 22.22751693510659 34 21.634176628117473 27.154113614519655 28.00011079136167 23.211598966001205 35 22.378884622118566 26.224234437756078 28.356017932026667 23.040863008098686 36 26.938292850681954 27.685083237064806 24.608722514947736 20.767901397305504 37 23.806233186703256 29.600722489069465 26.18375919942324 20.409285124804043 38 22.96818144875475 29.865833278409394 25.507345588583153 21.658639684252705 39 22.423625732223748 29.882957417704052 25.73111179131436 21.962305058757835 40 24.420902852554086 26.682845979385526 25.719183524273216 23.177067643787172 41 20.58667260788713 26.274292724525367 26.44167259373495 26.69736207385255 42 22.287360444329966 27.66529040073721 25.087672762752426 24.959676392180395 43 22.448250527573098 27.086486405616878 26.025153682579514 24.440109384230507 44 22.139955368063866 28.281051806283326 26.596780500073393 22.98221232557942 45 21.05557480701479 29.68430122796455 24.692786471485174 24.567337493535486 46 22.70606283487599 29.636507290192903 26.02096868041423 21.63646119451688 47 22.427992691004913 26.822083225338712 27.84259701421324 22.907327069443138 48 23.086938466720337 25.056659268445447 28.17549675167006 23.68090551316416 49 21.567762463320577 26.081560233502906 28.955706503169885 23.394970800006632 50 21.362394096195207 29.028610453933233 27.384470690226138 22.22452475964542 51 21.257122085206646 29.08083200269134 25.85708642170993 23.804959490392083 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1247.0 1 3279.5 2 5312.0 3 16997.5 4 28683.0 5 21264.5 6 13846.0 7 13836.0 8 13826.0 9 14309.5 10 14793.0 11 14977.5 12 15162.0 13 15301.5 14 15441.0 15 15161.5 16 14882.0 17 14792.5 18 14703.0 19 14032.5 20 13362.0 21 14742.0 22 16122.0 23 18432.0 24 20742.0 25 25068.0 26 35476.0 27 41558.0 28 50959.5 29 60361.0 30 70728.0 31 81095.0 32 95114.0 33 109133.0 34 127249.0 35 145365.0 36 153357.0 37 161349.0 38 178104.0 39 194859.0 40 232465.0 41 270071.0 42 308975.0 43 347879.0 44 361627.5 45 375376.0 46 372415.0 47 369454.0 48 374171.0 49 378888.0 50 370090.5 51 361293.0 52 344645.0 53 327997.0 54 304448.0 55 280899.0 56 261815.5 57 242732.0 58 233821.0 59 224910.0 60 209713.5 61 194517.0 62 175237.0 63 155957.0 64 141181.0 65 126405.0 66 108137.0 67 89869.0 68 78723.5 69 67578.0 70 56546.5 71 45515.0 72 37769.0 73 30023.0 74 25038.5 75 16618.0 76 13182.0 77 9796.0 78 6410.0 79 4945.5 80 3481.0 81 2487.5 82 1494.0 83 993.5 84 493.0 85 359.0 86 225.0 87 174.0 88 123.0 89 114.0 90 105.0 91 71.0 92 37.0 93 32.0 94 27.0 95 16.0 96 5.0 97 2.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 4946234.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.879041460746652 #Duplication Level Percentage of deduplicated Percentage of total 1 79.95733134893376 13.49603110929311 2 7.647548179676606 2.58166565595638 3 2.45687570418194 1.2440912062436429 4 1.1560021654708355 0.7804883391878057 5 0.6877340151518553 0.5804145477856966 6 0.47142139845076075 0.4774284797960135 7 0.35690787893936227 0.421698402039925 8 0.2853902902634315 0.3853691633480785 9 0.23687797439620747 0.3598445835874142 >10 3.16660109548716 13.558415584149449 >50 1.8325383084576234 22.828680568023785 >100 1.7389615572690815 42.030614234470434 >500 0.003994432283459392 0.42498452581240814 >1k 0.0015735642328778003 0.3960134158848756 >5k 1.2104340252906157E-4 0.1421995240447162 >10k+ 1.2104340252906157E-4 0.29206066037632444 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 14295 0.2890077582257532 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 6960 0.14071311628200364 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.029375884764044725 0.0 2 0.0 0.0 0.0 0.09277765669800499 0.0 3 0.0 0.0 0.0 0.14877985958610127 0.0 4 0.0 0.0 0.0 0.25200991299643327 0.0 5 0.0 0.0 0.0 0.45030218950417633 0.0 6 0.0 0.0 0.0 0.7629845251963413 0.0 7 0.0 0.0 0.0 0.9345696139729742 0.0 8 0.0 0.0 0.0 1.3497946114154729 0.0 9 0.0 0.0 0.0 1.5624412431761214 0.0 10 0.0 0.0 0.0 1.8501550876889368 0.0 11 0.0 0.0 0.0 2.120016966443561 0.0 12 0.0 0.0 0.0 2.3456633875388833 0.0 13 0.0 0.0 0.0 2.4473367010133367 0.0 14 0.0 0.0 0.0 2.492118245922049 0.0 15 0.0 0.0 0.0 2.5506274066289625 0.0 16 0.0 0.0 0.0 2.6735289919563043 0.0 17 0.0 0.0 0.0 2.8151518913177176 0.0 18 0.0 0.0 0.0 2.9837448046331816 0.0 19 0.0 0.0 0.0 3.0842050740017557 0.0 20 0.0 0.0 0.0 3.1909933901226673 0.0 21 0.0 0.0 0.0 3.3333036811440784 0.0 22 0.0 0.0 0.0 3.4916868065683913 0.0 23 0.0 0.0 0.0 3.666931245064427 0.0 24 0.0 0.0 0.0 3.8061887084193753 0.0 25 0.0 0.0 0.0 3.9229442036102617 0.0 26 0.0 0.0 0.0 4.035433827028807 0.0 27 0.0 0.0 0.0 4.1495408425885225 0.0 28 0.0 0.0 0.0 4.278568300650556 0.0 29 0.0 0.0 0.0 4.411780760877872 0.0 30 0.0 0.0 0.0 4.582051718539803 0.0 31 2.0217401764655696E-5 0.0 0.0 4.7286076639317915 0.0 32 4.043480352931139E-5 0.0 0.0 4.877225784303775 0.0 33 4.043480352931139E-5 0.0 0.0 5.027319775004579 0.0 34 4.043480352931139E-5 0.0 0.0 5.17848528799891 0.0 35 4.043480352931139E-5 0.0 0.0 5.367720168516088 0.0 36 4.043480352931139E-5 0.0 0.0 5.524708293218639 0.0 37 4.043480352931139E-5 0.0 0.0 5.684587506373536 0.0 38 4.043480352931139E-5 0.0 0.0 5.850693679271947 0.0 39 4.043480352931139E-5 0.0 0.0 6.038816602692068 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CACGACC 2195 0.0 39.772213 27 AACACGT 2075 0.0 39.578312 41 TAACGCG 40 3.4613186E-7 39.375004 1 CGATCGC 40 3.4613186E-7 39.375004 10 CGTTTTT 12290 0.0 39.1965 1 ACACGAC 2275 0.0 38.769234 26 GCTACGA 1025 0.0 38.195126 10 ACGACCA 2280 0.0 38.19079 28 GACCGAT 3050 0.0 38.06557 9 CGTAAGG 735 0.0 37.959183 2 CATACGA 1715 0.0 37.915455 18 AGACACG 2315 0.0 37.807774 24 TACGAAT 1040 0.0 37.64423 12 GACACGA 2350 0.0 37.43617 25 GCGATAT 735 0.0 37.346935 9 GCGAGAC 2365 0.0 37.29387 21 TACGGGA 1400 0.0 37.285713 4 TAAGGGA 5285 0.0 37.20908 4 CGAGACA 2370 0.0 37.12025 22 GGGCGAT 12615 0.0 36.92033 7 >>END_MODULE