##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545370_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3160669 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.14794209706869 31.0 31.0 33.0 30.0 33.0 2 31.50558378621741 31.0 31.0 34.0 30.0 34.0 3 31.656894473923085 31.0 31.0 34.0 30.0 34.0 4 35.485039401468484 37.0 35.0 37.0 33.0 37.0 5 35.404918705501906 37.0 35.0 37.0 33.0 37.0 6 35.4677557188051 37.0 35.0 37.0 33.0 37.0 7 35.80758092669622 37.0 35.0 37.0 35.0 37.0 8 35.843429033536886 37.0 35.0 37.0 35.0 37.0 9 37.7458490591707 39.0 37.0 39.0 35.0 39.0 10 37.06449489016408 39.0 37.0 39.0 33.0 39.0 11 36.74561841179826 39.0 35.0 39.0 32.0 39.0 12 36.23090428007488 38.0 35.0 39.0 32.0 39.0 13 36.03201663951524 38.0 35.0 39.0 31.0 39.0 14 37.050701607792526 39.0 35.0 41.0 31.0 41.0 15 37.21722964347105 39.0 35.0 41.0 32.0 41.0 16 37.25103546116345 39.0 35.0 41.0 32.0 41.0 17 37.16254565093656 39.0 35.0 41.0 32.0 41.0 18 37.0758035719653 39.0 35.0 41.0 32.0 41.0 19 37.02736414347722 39.0 35.0 41.0 31.0 41.0 20 36.89442899588663 38.0 35.0 41.0 31.0 41.0 21 36.78947020393468 38.0 35.0 41.0 31.0 41.0 22 36.66503705386423 38.0 35.0 41.0 31.0 41.0 23 36.555727917096036 38.0 35.0 40.0 31.0 41.0 24 36.45960364720254 38.0 35.0 40.0 31.0 41.0 25 36.330205092656016 38.0 35.0 40.0 30.0 41.0 26 36.174476985726756 38.0 35.0 40.0 30.0 41.0 27 36.03587246877164 38.0 35.0 40.0 30.0 41.0 28 35.9354544876417 38.0 35.0 40.0 30.0 41.0 29 36.03327618298531 38.0 35.0 40.0 30.0 41.0 30 35.98966263155047 38.0 35.0 40.0 30.0 41.0 31 35.90348150976897 38.0 35.0 40.0 30.0 41.0 32 35.7544159163772 38.0 34.0 40.0 29.0 41.0 33 35.534900997225584 38.0 34.0 40.0 28.0 41.0 34 35.32402159163139 38.0 34.0 40.0 27.0 41.0 35 35.159060629252856 38.0 34.0 40.0 26.0 41.0 36 35.01658952582507 38.0 34.0 40.0 25.0 41.0 37 34.90877690767366 37.0 34.0 40.0 25.0 41.0 38 34.82162510531789 37.0 33.0 40.0 25.0 41.0 39 34.739590890409595 37.0 33.0 40.0 24.0 41.0 40 34.606527921778586 37.0 33.0 40.0 24.0 41.0 41 34.51718639313386 37.0 33.0 40.0 24.0 41.0 42 34.44294926169112 37.0 33.0 40.0 24.0 41.0 43 34.330971702509814 36.0 33.0 40.0 23.0 41.0 44 34.209312015905496 36.0 33.0 40.0 23.0 41.0 45 34.173398416601046 36.0 33.0 40.0 23.0 41.0 46 34.16832892023809 36.0 33.0 40.0 23.0 41.0 47 34.12377980737622 36.0 33.0 40.0 23.0 41.0 48 34.0291631297045 36.0 33.0 40.0 23.0 41.0 49 33.96744803078082 36.0 33.0 40.0 23.0 41.0 50 33.857748470339665 35.0 33.0 40.0 23.0 41.0 51 33.61111967118354 35.0 32.0 39.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 4.0 10 1.0 11 9.0 12 5.0 13 33.0 14 34.0 15 129.0 16 284.0 17 729.0 18 1697.0 19 3244.0 20 5637.0 21 8960.0 22 13354.0 23 19437.0 24 27694.0 25 39949.0 26 52819.0 27 61412.0 28 67248.0 29 75603.0 30 88498.0 31 105984.0 32 130295.0 33 165429.0 34 261915.0 35 343064.0 36 253628.0 37 318616.0 38 445956.0 39 668736.0 40 265.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.36721782635259 23.679290681814514 27.18490927079046 14.768582221042445 2 32.14705494311489 24.97189677248709 29.411906150248573 13.469142134149447 3 29.010219039070527 25.30521228258954 31.847371553300903 13.837197125039037 4 26.294401596624006 27.824773805798706 30.875551979660003 15.005272617917283 5 23.1905017576975 32.46100746392615 29.850705657568067 14.497785120808285 6 21.419674125952447 40.98682905422871 26.89870404018896 10.694792779629882 7 87.86823295954116 3.6126212520197467 6.753380376116576 1.765765412322518 8 88.75437446945568 2.8236110772750957 6.570476060606156 1.8515383926630724 9 84.32414150295396 4.235210963248603 8.352219102981046 3.0884284308163874 10 44.82626937524935 23.279913208248 17.079390470814882 14.814426945687764 11 36.51881927528634 25.20260742266906 21.379271287186352 16.899302014858247 12 32.07121656839106 22.849466362975686 26.942017655123013 18.13729941351024 13 23.73962600955684 29.24225852185091 28.170238642515237 18.847876826077012 14 20.875675371258424 31.081394476928775 29.10810970715377 18.934820444659024 15 20.66708029217865 23.882348958400897 36.85203986877462 18.59853088064584 16 22.456068636102042 20.66154348968525 36.21217533376637 20.670212540446343 17 22.407471329645716 21.81364135251113 28.665418618653206 27.11346869918995 18 24.51395574797614 23.797904810658757 29.96792767607111 21.720211765293993 19 28.497384572696475 24.945509953747134 25.269017413718426 21.288088059837964 20 30.031426890952517 23.79806300501571 25.205739670936754 20.96477043309502 21 26.574120858590383 25.37228668993811 26.860389366934655 21.193203084536847 22 25.44698606529187 23.90003508750837 26.30171017591529 24.351268671284465 23 24.356963668134814 26.871146583207544 25.71490402822947 23.056985720428173 24 23.4321594573807 24.56008522246398 31.417778957556138 20.58997636259918 25 23.030219235231527 24.986767042040782 29.261526594527933 22.721487128199758 26 22.321476877205427 28.033305607135706 26.77271805431065 22.872499461348212 27 22.68174870573287 27.238632074412095 27.55869089740178 22.520928322453255 28 20.679704201863593 27.289127713151867 31.09053811076073 20.94062997422381 29 22.103073747994493 24.98214776681772 30.36224293021509 22.552535554972696 30 22.826021959275078 26.499990982921656 28.860060955449622 21.813926102353648 31 26.471136332213213 25.471696023848118 25.05561322618724 23.001554417751432 32 27.110684478507558 25.771189580433763 25.32599902109332 21.792126919965362 33 25.580628658046763 25.83288537964589 25.25813364195998 23.32835232034737 34 22.450278722637517 26.184140129826943 27.488389325171347 23.87719182236419 35 22.899329224287644 25.604104700618763 28.141004325350107 23.35556174974349 36 26.8353946585359 26.724753525282146 24.579353295140997 21.86049852104096 37 23.978942432757115 28.34744796117531 25.995888845051475 21.6777207610161 38 23.582950318429422 28.924129670016065 24.599380700731395 22.89353931082312 39 23.467626632209825 28.443788324560405 25.08630293143635 23.00228211179342 40 24.563217470731672 25.493210456393882 26.04603645620595 23.8975356166685 41 21.551671497395013 25.4793526307247 26.683021853917637 26.285954017962652 42 23.5374536213694 27.15501053732612 24.378414822937803 24.929121018366683 43 23.288329148037963 26.091121847937888 26.21233036423618 24.408218639787968 44 23.011489023368153 27.509808841102945 26.36729755630849 23.111404579220412 45 21.948929166578342 28.7558741519596 24.855623920125772 24.439572761336287 46 23.33183259620036 28.15783620493003 25.634920961353437 22.87541023751617 47 23.19350745047963 26.547892234207378 27.172443555462465 23.086156759850525 48 23.91775285548724 24.471559660312423 27.817908170706897 23.79277931349344 49 22.34197886586669 25.35365139468891 27.809840258502234 24.494529480942166 50 21.727077400385806 27.35515803774454 27.283179605330393 23.634584956539264 51 21.726096595372688 28.45334326372043 25.502449006840006 24.318111134066868 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 888.0 1 1989.5 2 3091.0 3 14886.0 4 26681.0 5 19560.5 6 12440.0 7 12287.5 8 12135.0 9 12337.0 10 12539.0 11 12799.0 12 13059.0 13 12991.5 14 12924.0 15 12468.0 16 12012.0 17 11804.5 18 11597.0 19 11351.0 20 11105.0 21 10994.0 22 10883.0 23 12231.5 24 13580.0 25 13999.5 26 17723.0 27 21027.0 28 24058.5 29 27090.0 30 32922.0 31 38754.0 32 46863.0 33 54972.0 34 61473.5 35 67975.0 36 77361.0 37 86747.0 38 98163.0 39 109579.0 40 131259.0 41 152939.0 42 176835.0 43 200731.0 44 213011.5 45 225292.0 46 229405.5 47 233519.0 48 235214.5 49 236910.0 50 234656.5 51 232403.0 52 225691.5 53 218980.0 54 203371.0 55 187762.0 56 179721.0 57 171680.0 58 167246.5 59 162813.0 60 155900.0 61 148987.0 62 133913.5 63 118840.0 64 106694.0 65 94548.0 66 82431.5 67 70315.0 68 58383.0 69 46451.0 70 39114.5 71 31778.0 72 26791.5 73 21805.0 74 17757.0 75 10883.5 76 8058.0 77 6646.5 78 5235.0 79 3787.5 80 2340.0 81 1798.0 82 1256.0 83 849.0 84 442.0 85 286.5 86 131.0 87 109.0 88 87.0 89 90.0 90 93.0 91 65.0 92 37.0 93 27.0 94 17.0 95 12.0 96 7.0 97 6.0 98 5.0 99 3.5 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3160669.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.667683275181744 #Duplication Level Percentage of deduplicated Percentage of total 1 78.33434313145298 16.189893934102788 2 6.7231080714806755 2.779021364923611 3 2.2023780813478195 1.3655415791249756 4 1.1954177063883238 0.9882605814871234 5 0.8023481641311743 0.8291338866343322 6 0.6270253763672102 0.7775497130555478 7 0.5279796395060934 0.7638481175539601 8 0.42931687353598097 0.7098388133546327 9 0.37289284331532635 0.6936148063100823 >10 6.109503575633224 32.122259403181424 >50 2.383648167110377 34.03569401290325 >100 0.2883192642222068 7.672144137080508 >500 0.0029442918609299397 0.3785936036900766 >1k 6.198509180905136E-4 0.24869125561741348 >5k 0.0 0.0 >10k+ 1.549627295226284E-4 0.4459147909801993 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 13923 0.44050800637459975 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.02701959616777334 0.0 2 0.0 0.0 0.0 0.08602609131168117 0.0 3 0.0 0.0 0.0 0.14607666921148654 0.0 4 0.0 0.0 0.0 0.25434488711092496 0.0 5 0.0 0.0 0.0 0.46816037997018983 0.0 6 0.0 0.0 0.0 0.868455380807038 0.0 7 0.0 0.0 0.0 1.104924305582141 0.0 8 0.0 0.0 0.0 1.6309838201975595 0.0 9 0.0 0.0 0.0 1.9320909592241389 0.0 10 0.0 0.0 0.0 2.2820168768067775 0.0 11 0.0 0.0 0.0 2.5634129989568666 0.0 12 0.0 0.0 0.0 2.796718036592886 0.0 13 0.0 0.0 0.0 2.91694574787806 0.0 14 0.0 0.0 0.0 2.977407631105946 0.0 15 0.0 0.0 0.0 3.044513677325908 0.0 16 0.0 0.0 0.0 3.161893890185907 0.0 17 0.0 0.0 0.0 3.2968653155392103 0.0 18 0.0 0.0 0.0 3.462494807270233 3.163887139083529E-5 19 0.0 0.0 0.0 3.5616826690805015 3.163887139083529E-5 20 0.0 0.0 0.0 3.6714695528067 3.163887139083529E-5 21 0.0 0.0 0.0 3.807516699787292 3.163887139083529E-5 22 0.0 0.0 0.0 3.957706422279587 3.163887139083529E-5 23 0.0 0.0 0.0 4.124728024351807 3.163887139083529E-5 24 0.0 0.0 0.0 4.264382002670954 3.163887139083529E-5 25 0.0 0.0 0.0 4.383723825557184 3.163887139083529E-5 26 0.0 0.0 0.0 4.504584314270175 3.163887139083529E-5 27 0.0 0.0 0.0 4.619528334033079 3.163887139083529E-5 28 0.0 0.0 0.0 4.745324486683041 3.163887139083529E-5 29 0.0011073604986792352 0.0 0.0 4.881150161563896 3.163887139083529E-5 30 0.0011073604986792352 0.0 0.0 5.052348094659706 3.163887139083529E-5 31 0.0011073604986792352 0.0 0.0 5.202221428438094 3.163887139083529E-5 32 0.0011073604986792352 0.0 0.0 5.3601310355497525 3.163887139083529E-5 33 0.0011073604986792352 0.0 0.0 5.513516284052522 3.163887139083529E-5 34 0.0011073604986792352 0.0 0.0 5.671141141321663 3.163887139083529E-5 35 0.0011073604986792352 0.0 0.0 5.849932403551273 3.163887139083529E-5 36 0.0011073604986792352 0.0 0.0 6.014960756725871 3.163887139083529E-5 37 0.0011073604986792352 0.0 0.0 6.185146245937173 3.163887139083529E-5 38 0.0011073604986792352 0.0 0.0 6.368588422261237 3.163887139083529E-5 39 0.0011073604986792352 0.0 0.0 6.560288344018308 3.163887139083529E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 12430 0.0 41.053905 1 TCGATAG 95 0.0 40.263157 1 ACGTTAG 145 0.0 38.793102 1 TAGGGCG 1955 0.0 38.55499 5 AGGGCGA 4145 0.0 38.268997 6 GGGCGAT 7855 0.0 37.38065 7 AAGGGCG 1560 0.0 36.923077 5 TAGGGTA 1775 0.0 36.633804 5 GGCGATA 1780 0.0 36.5309 8 TACGGGT 430 0.0 36.104652 4 GGCGATT 2340 0.0 36.05769 8 CGGTCTA 125 0.0 36.0 31 ACACGAC 895 0.0 35.949722 26 GTAGGGC 2060 0.0 35.82524 4 GCGATAA 415 0.0 35.783134 9 CGTAAGG 535 0.0 35.74766 2 CACGACC 895 0.0 35.698326 27 ACGACCA 890 0.0 35.64607 28 CGAGGGT 560 0.0 35.357143 4 TAGGGTC 1305 0.0 35.344826 5 >>END_MODULE