##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545369_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 5762944 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.156347866645937 31.0 31.0 33.0 30.0 34.0 2 31.508241794471715 31.0 31.0 34.0 30.0 34.0 3 31.678110701752438 31.0 31.0 34.0 30.0 34.0 4 35.446587369233505 37.0 35.0 37.0 33.0 37.0 5 35.354068857861535 37.0 35.0 37.0 33.0 37.0 6 35.405755114052816 37.0 35.0 37.0 33.0 37.0 7 35.84385029595984 37.0 35.0 37.0 35.0 37.0 8 35.897790608411256 37.0 35.0 37.0 35.0 37.0 9 37.77774519412301 39.0 37.0 39.0 35.0 39.0 10 37.082775574428624 39.0 37.0 39.0 33.0 39.0 11 36.69754798936099 39.0 35.0 39.0 32.0 39.0 12 35.74429111232037 37.0 35.0 39.0 31.0 39.0 13 35.286955590753614 37.0 35.0 39.0 30.0 39.0 14 36.20316942174 38.0 35.0 40.0 30.0 41.0 15 36.54406046631721 38.0 35.0 41.0 31.0 41.0 16 36.70875788485885 38.0 35.0 41.0 32.0 41.0 17 36.648581870655 38.0 35.0 40.0 32.0 41.0 18 36.60865453490438 38.0 35.0 40.0 31.0 41.0 19 36.564661395286855 38.0 35.0 40.0 31.0 41.0 20 36.43818714879062 38.0 35.0 40.0 31.0 41.0 21 36.30278847061502 38.0 35.0 40.0 31.0 41.0 22 36.18011419163539 37.0 35.0 40.0 30.0 41.0 23 36.13162126857384 37.0 35.0 40.0 31.0 41.0 24 36.02866746579526 37.0 34.0 40.0 30.0 41.0 25 35.922183696388515 37.0 34.0 40.0 30.0 41.0 26 35.756752972092045 37.0 34.0 40.0 30.0 41.0 27 35.63186697632321 37.0 34.0 40.0 30.0 41.0 28 35.59977105451658 36.0 34.0 40.0 29.0 41.0 29 35.753576297114805 37.0 34.0 40.0 30.0 41.0 30 35.74783339904049 37.0 34.0 40.0 30.0 41.0 31 35.62471941424383 36.0 34.0 40.0 30.0 41.0 32 35.49632791850832 36.0 34.0 40.0 29.0 41.0 33 35.335930559103126 36.0 34.0 40.0 29.0 41.0 34 35.24703311363081 36.0 34.0 40.0 29.0 41.0 35 35.112264148324186 36.0 34.0 40.0 27.0 41.0 36 34.942311776758544 36.0 34.0 40.0 27.0 41.0 37 34.842953011516336 36.0 34.0 40.0 26.0 41.0 38 34.81897186576861 36.0 33.0 40.0 27.0 41.0 39 34.797952921284676 36.0 34.0 40.0 27.0 41.0 40 34.642382435088734 36.0 33.0 40.0 25.0 41.0 41 34.62080995407903 36.0 34.0 40.0 26.0 41.0 42 34.55728842758146 36.0 33.0 40.0 26.0 41.0 43 34.411193133231905 35.0 33.0 40.0 25.0 41.0 44 34.297445715245544 35.0 33.0 40.0 24.0 41.0 45 34.25162069942029 35.0 33.0 40.0 24.0 41.0 46 34.27799471936566 35.0 33.0 40.0 25.0 41.0 47 34.24459373542412 35.0 33.0 40.0 25.0 41.0 48 34.215854951913464 35.0 33.0 40.0 24.0 41.0 49 34.20863884847744 35.0 33.0 40.0 24.0 41.0 50 34.05732000866224 35.0 33.0 39.0 24.0 41.0 51 33.81349410995491 35.0 33.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 4.0 10 4.0 11 9.0 12 12.0 13 22.0 14 53.0 15 161.0 16 471.0 17 1239.0 18 2728.0 19 5260.0 20 9413.0 21 15007.0 22 22861.0 23 33758.0 24 47797.0 25 66376.0 26 86320.0 27 104117.0 28 119405.0 29 140123.0 30 168169.0 31 205799.0 32 255636.0 33 331900.0 34 578093.0 35 863785.0 36 398928.0 37 483729.0 38 690855.0 39 1130360.0 40 550.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.34433095306843 23.473158857694955 28.990807476178844 12.19170271305777 2 29.78569633853808 25.632471875485862 30.363942457188546 14.217889328787509 3 29.082878473224795 25.077755397241408 31.337142960264753 14.50222316926904 4 25.513938709104234 28.415979749239277 30.230729293916443 15.839352247740043 5 23.17055310619017 33.06877526486463 29.183920579481597 14.576751049463606 6 21.684212097150347 41.26364927370455 26.462117278946316 10.590021350198787 7 88.42608916553762 4.304084856628834 5.491429380538835 1.778396597294716 8 89.6211207327366 3.110857922617329 5.01493681007485 2.253084534571219 9 85.56074811762878 4.363533638362615 7.043587444195189 3.0321307998134284 10 52.319283338515866 20.460896375186017 14.00888157164116 13.210938714656953 11 46.200188653577065 22.390569819869842 17.733280073517978 13.675961453035116 12 39.45471273016014 22.59263668014126 23.10289671390178 14.849753875796814 13 22.021279401639163 40.447694789329894 23.53102858538969 13.99999722364125 14 16.91683972636208 41.513955367256735 26.338569314572553 15.23063559180863 15 15.450974363103304 23.73604532683295 46.49364977344913 14.319330536614618 16 17.167770500633008 18.86344895942074 44.57620965950736 19.392570880438885 17 17.490938659129778 19.724501921240257 27.578161439708595 35.20639797992137 18 22.812853985740624 23.20586491904138 32.70505491637608 21.276226178841924 19 29.90705792039624 24.698418030784268 24.17760783377385 21.216916215045643 20 31.572717000199894 23.627906153521533 23.853381188503654 20.945995657774915 21 23.658151111654043 27.88253711991649 26.495103891344424 21.964207877085045 22 23.492090153921332 25.737452940719187 24.108094751571418 26.662362153788067 23 20.487393249006065 31.73388462563579 23.644703123958866 24.134019001399285 24 21.18045915421007 24.893561346422942 35.5498856140195 18.376093885347487 25 18.541634275814584 25.753816105101834 33.91122662305933 21.79332299602425 26 18.655985551829065 33.05628165048975 26.461041439930703 21.826691357750484 27 20.02509481265131 32.068800252093375 27.319977428203362 20.586127507051952 28 16.896711125424783 28.56277971814406 35.467288941207826 19.07322021522333 29 17.00127573684561 25.39299358105857 34.68419960353597 22.92153107855985 30 19.83422014859072 28.959434622304155 30.625006940896878 20.581338288208247 31 27.649149462496947 26.562014137218753 23.848314333784952 21.940522066499348 32 28.398245757723828 26.68264692490505 25.14227103369389 19.77683628367723 33 25.7698842813673 27.426711069897607 24.92425746285232 21.879147185882772 34 19.244400084401306 26.6898307531706 29.219510028207807 24.84625913422029 35 20.143194172978255 25.264864624747354 30.617389306576637 23.974551895697754 36 29.106217238966753 24.20620432889856 25.915469593318967 20.77210883881572 37 20.572991859716144 29.87410601248251 28.764065727517046 20.7888364002843 38 20.191953973524644 31.666714096128644 24.434056621060346 23.707275309286366 39 21.120576566421605 29.657012110476867 26.639387785132048 22.58302353796948 40 23.239701791306665 25.396151689136666 25.320582674410858 26.043563845145812 41 17.85575219887613 24.131936732336808 26.820146091997422 31.192164976789645 42 22.253192118472782 26.742633626146635 24.256699353663684 26.7474749017169 43 22.49237542478289 26.713568620482864 25.543107828221128 25.250948126513116 44 20.44802101148302 30.340568986962218 26.741679252826334 22.469730748728427 45 18.0222816671479 34.00893709881616 23.004769784332453 24.964011449703484 46 22.219112314816872 30.420059608422363 26.16341578193368 21.19741229482709 47 21.194653288319305 26.870797286942228 27.78690891322213 24.147640511516336 48 23.086307970370697 23.455459570663884 29.605111554094577 23.853120904870845 49 21.036990815805254 23.349020917086822 30.638906086888923 24.975082180218998 50 19.32493184039269 31.08246410168136 26.426562534704484 23.166041523221466 51 18.26956847055949 31.68804000177687 24.76263867911956 25.279752848544078 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1446.0 1 3149.5 2 4853.0 3 12462.5 4 20072.0 5 15677.5 6 11283.0 7 12220.0 8 13157.0 9 14586.0 10 16015.0 11 15976.0 12 15937.0 13 16189.5 14 16442.0 15 16097.0 16 15752.0 17 15729.0 18 15706.0 19 15216.0 20 14726.0 21 16388.5 22 18051.0 23 20218.5 24 22386.0 25 24672.5 26 31489.0 27 36019.0 28 43476.0 29 50933.0 30 59948.5 31 68964.0 32 85289.0 33 101614.0 34 116270.5 35 130927.0 36 141311.0 37 151695.0 38 197549.5 39 243404.0 40 320689.0 41 397974.0 42 479349.0 43 560724.0 44 562699.0 45 564674.0 46 548317.0 47 531960.0 48 522805.5 49 513651.0 50 490922.5 51 468194.0 52 426002.0 53 383810.0 54 341404.0 55 298998.0 56 275312.0 57 251626.0 58 230983.0 59 210340.0 60 195801.5 61 181263.0 62 158347.5 63 135432.0 64 113105.0 65 90778.0 66 75940.0 67 61102.0 68 51871.0 69 42640.0 70 35781.5 71 28923.0 72 23212.0 73 17501.0 74 14823.0 75 9985.5 76 7826.0 77 5788.5 78 3751.0 79 2745.5 80 1740.0 81 1191.0 82 642.0 83 578.0 84 514.0 85 392.5 86 271.0 87 163.0 88 55.0 89 42.5 90 30.0 91 27.5 92 25.0 93 19.0 94 13.0 95 7.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 5762944.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 15.452256621343441 #Duplication Level Percentage of deduplicated Percentage of total 1 77.91546077902079 12.03969694727649 2 10.020724539360213 3.096856142279751 3 3.5836161217377462 1.6612486783642557 4 1.741375294070315 1.0763271167216764 5 0.9852769999590758 0.7612376523237515 6 0.6308689268704145 0.5849009131459917 7 0.43856313215471937 0.4743753043900416 8 0.30659552820864466 0.37900742246690555 9 0.24210557085604126 0.33669696692919576 >10 1.7856057559049274 5.913799299129725 >50 0.5428945171298679 6.191723495526956 >100 1.769833751485576 62.73196347473655 >500 0.032430023875074064 3.2759913964056224 >1k 0.004422275982964638 1.038398633551993 >5k 1.1339169187088815E-4 0.16768147480920242 >10k+ 1.1339169187088815E-4 0.2700950819418867 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 15415 0.2674848133176377 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9570 0.1660609577327144 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.7352242187326477E-5 0.0 0.0 0.07274059924927259 0.0 2 1.7352242187326477E-5 0.0 0.0 0.27956197388001686 0.0 3 1.7352242187326477E-5 0.0 0.0 0.4095996768318415 0.0 4 1.7352242187326477E-5 0.0 0.0 0.6702477067276725 0.0 5 1.7352242187326477E-5 0.0 0.0 1.1210936632387891 0.0 6 1.7352242187326477E-5 0.0 0.0 1.6038156886480244 0.0 7 1.7352242187326477E-5 0.0 0.0 1.8646372409657286 0.0 8 1.7352242187326477E-5 0.0 0.0 2.5326638606934235 0.0 9 1.7352242187326477E-5 0.0 0.0 2.769869011394176 0.0 10 1.7352242187326477E-5 0.0 0.0 3.1848652355462765 0.0 11 1.7352242187326477E-5 0.0 0.0 3.6192265619794326 0.0 12 1.7352242187326477E-5 0.0 0.0 3.970227716944673 0.0 13 1.7352242187326477E-5 0.0 0.0 4.112759034271372 0.0 14 1.7352242187326477E-5 0.0 0.0 4.165041339981787 0.0 15 1.7352242187326477E-5 0.0 0.0 4.263949120449548 0.0 16 1.7352242187326477E-5 0.0 0.0 4.484201130533283 0.0 17 1.7352242187326477E-5 0.0 0.0 4.738810580147924 0.0 18 1.7352242187326477E-5 0.0 0.0 5.072702424316461 3.4704484374652955E-5 19 1.7352242187326477E-5 0.0 0.0 5.229150239877396 3.4704484374652955E-5 20 1.7352242187326477E-5 0.0 0.0 5.401891810852231 3.4704484374652955E-5 21 1.7352242187326477E-5 0.0 0.0 5.637032044732692 3.4704484374652955E-5 22 1.7352242187326477E-5 0.0 0.0 5.862958238011683 3.4704484374652955E-5 23 1.7352242187326477E-5 0.0 0.0 6.137401300446438 3.4704484374652955E-5 24 1.7352242187326477E-5 0.0 0.0 6.328779179530462 3.4704484374652955E-5 25 1.7352242187326477E-5 0.0 0.0 6.4954648179819205 3.4704484374652955E-5 26 1.7352242187326477E-5 0.0 0.0 6.659582324589654 3.4704484374652955E-5 27 1.7352242187326477E-5 0.0 0.0 6.815804561002154 3.4704484374652955E-5 28 1.7352242187326477E-5 0.0 0.0 6.993665043422251 3.4704484374652955E-5 29 1.7352242187326477E-5 0.0 0.0 7.1722196155298406 3.4704484374652955E-5 30 1.7352242187326477E-5 0.0 0.0 7.395456211269796 3.4704484374652955E-5 31 1.7352242187326477E-5 0.0 0.0 7.609634936587966 3.4704484374652955E-5 32 1.7352242187326477E-5 0.0 0.0 7.79724737911734 3.4704484374652955E-5 33 1.7352242187326477E-5 0.0 0.0 7.994108566732559 3.4704484374652955E-5 34 1.7352242187326477E-5 0.0 0.0 8.19784124225396 3.4704484374652955E-5 35 1.7352242187326477E-5 0.0 0.0 8.450455184017057 3.4704484374652955E-5 36 1.7352242187326477E-5 0.0 0.0 8.668156414499256 3.4704484374652955E-5 37 3.4704484374652955E-5 0.0 0.0 8.887974618528308 3.4704484374652955E-5 38 3.4704484374652955E-5 0.0 0.0 9.099810791151189 3.4704484374652955E-5 39 3.4704484374652955E-5 0.0 0.0 9.296706683250783 3.4704484374652955E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACTCGAA 60 0.0 45.000004 33 GTCGAAC 20 7.035647E-4 45.0 28 CGTAAGG 955 0.0 41.230362 2 TAGTACG 175 0.0 41.14286 1 CGTTTTT 10790 0.0 41.058853 1 ACGTAAG 205 0.0 40.609756 1 TCGTTAC 95 0.0 40.263157 37 ACTACGC 45 1.9306754E-8 40.0 14 GTATCGC 45 1.9306754E-8 40.0 1 CACGACC 1170 0.0 39.80769 27 AGGGCGA 6355 0.0 39.476795 6 CATCGCA 80 0.0 39.375 23 TCGTCAG 115 0.0 39.130436 1 TCGAACG 115 0.0 39.130436 1 CGTAATC 75 0.0 39.0 16 GGCGATA 2500 0.0 38.97 8 ACACGAC 1230 0.0 38.963413 26 TCGCTAC 35 6.252654E-6 38.57143 39 CGTCGTT 35 6.252654E-6 38.57143 24 GGGCGAT 13190 0.0 38.347233 7 >>END_MODULE