SRR1545368_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545368_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	55875
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	125	0.22371364653243847	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	121	0.21655480984340048	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGATGCC	60	0.0	45.000004	8
CTTTAGG	20	6.975729E-4	45.000004	2
CACGCCA	40	6.6174835E-9	45.000004	27
AGGGTAC	20	6.975729E-4	45.000004	6
ATGCGGG	20	6.975729E-4	45.000004	3
GAGCTAG	20	6.975729E-4	45.000004	45
AAGGGTT	20	6.975729E-4	45.000004	5
AAGGGTC	20	6.975729E-4	45.000004	5
AAGGGCC	20	6.975729E-4	45.000004	5
TAGTTGG	20	6.975729E-4	45.000004	2
AAGGGAC	30	2.1284995E-6	45.000004	5
ACTTCCC	40	6.6174835E-9	45.000004	44
CATAGTT	20	6.975729E-4	45.000004	36
GGTAGGG	20	6.975729E-4	45.000004	3
CATAGGG	20	6.975729E-4	45.000004	3
GGGACCT	20	6.975729E-4	45.000004	7
TAATAGG	30	2.1284995E-6	45.000004	2
GTAGGGT	20	6.975729E-4	45.000004	4
CAAGGGA	30	2.1284995E-6	45.000004	4
TAGGGAA	40	6.6174835E-9	45.000004	5