SRR1545366_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545366_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	2237299
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	6070	0.2713092885662578	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4310	0.1926430039078371	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AGCGTTA	30	2.1664273E-6	45.000004	19
ATTACGC	55	1.8189894E-12	45.000004	22
CGTCGGA	30	2.1664273E-6	45.000004	23
TACGTCA	30	2.1664273E-6	45.000004	27
AATCCGT	20	7.03472E-4	45.0	35
TCGTTAG	85	0.0	45.0	1
GTACCGA	25	3.8919934E-5	45.0	3
CGTATAT	20	7.03472E-4	45.0	44
ACGCATA	20	7.03472E-4	45.0	33
CTATACG	20	7.03472E-4	45.0	1
ACTTACG	25	3.8919934E-5	45.0	41
CTAACGA	40	6.8193913E-9	45.0	38
CGTAGGT	20	7.03472E-4	45.0	40
CGTAAGT	25	3.8919934E-5	45.0	17
CCGGTAA	20	7.03472E-4	45.0	29
GCGTAAG	150	0.0	45.0	1
TACCGGT	25	3.8919934E-5	45.0	40
TATCCGA	20	7.03472E-4	45.0	23
ACGTTAG	140	0.0	43.392857	1
TACGTAG	145	0.0	41.89655	1