##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545366_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2237299 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.31725620938462 31.0 31.0 33.0 30.0 34.0 2 31.681941036937843 31.0 31.0 34.0 30.0 34.0 3 31.874511185138868 31.0 31.0 34.0 30.0 34.0 4 35.63695777810655 37.0 35.0 37.0 33.0 37.0 5 35.562472427690714 37.0 35.0 37.0 33.0 37.0 6 35.614507940154624 37.0 35.0 37.0 33.0 37.0 7 35.92057208267648 37.0 35.0 37.0 35.0 37.0 8 35.96842263819007 37.0 35.0 37.0 35.0 37.0 9 37.90493000712019 39.0 38.0 39.0 35.0 39.0 10 37.31852827896495 39.0 37.0 39.0 34.0 39.0 11 36.912464985681396 39.0 37.0 39.0 33.0 39.0 12 35.78739676726267 37.0 35.0 39.0 32.0 39.0 13 35.24034382530006 37.0 35.0 39.0 30.0 39.0 14 36.12606897871049 38.0 35.0 40.0 31.0 41.0 15 36.524953526551435 38.0 35.0 41.0 31.0 41.0 16 36.74337761738597 38.0 35.0 41.0 32.0 41.0 17 36.70494734946022 38.0 35.0 40.0 32.0 41.0 18 36.67724251429961 38.0 35.0 40.0 32.0 41.0 19 36.63131079037715 37.0 35.0 40.0 32.0 41.0 20 36.48554976335304 37.0 35.0 40.0 32.0 41.0 21 36.336519168872826 37.0 35.0 40.0 31.0 41.0 22 36.21001126805134 37.0 35.0 40.0 31.0 41.0 23 36.17014846920327 36.0 35.0 40.0 31.0 41.0 24 36.07124975249173 36.0 35.0 40.0 31.0 41.0 25 35.95562863971244 36.0 35.0 40.0 31.0 41.0 26 35.798104768294266 36.0 34.0 40.0 31.0 41.0 27 35.674657254126515 36.0 34.0 40.0 30.0 41.0 28 35.672307098872345 36.0 34.0 40.0 30.0 41.0 29 35.80955562935486 36.0 35.0 40.0 30.0 41.0 30 35.834356963463534 36.0 35.0 40.0 30.0 41.0 31 35.690821387753715 36.0 34.0 40.0 30.0 41.0 32 35.54506304253477 36.0 34.0 40.0 30.0 41.0 33 35.36669349961717 36.0 34.0 40.0 30.0 41.0 34 35.26553491509181 36.0 34.0 40.0 29.0 41.0 35 35.124547948217916 36.0 34.0 40.0 29.0 41.0 36 34.946453290329096 35.0 34.0 40.0 27.0 41.0 37 34.80933706223442 35.0 34.0 40.0 27.0 41.0 38 34.795956642362064 35.0 34.0 40.0 27.0 41.0 39 34.76164518019272 35.0 34.0 40.0 27.0 41.0 40 34.587158444177554 35.0 34.0 40.0 26.0 41.0 41 34.57432243075244 35.0 34.0 40.0 26.0 41.0 42 34.54598692441198 35.0 34.0 40.0 27.0 41.0 43 34.40398355338289 35.0 33.0 40.0 27.0 41.0 44 34.29021735583844 35.0 33.0 40.0 26.0 41.0 45 34.25473975539255 35.0 33.0 39.0 26.0 41.0 46 34.28474200363921 35.0 33.0 39.0 27.0 41.0 47 34.27386236707744 35.0 33.0 39.0 27.0 41.0 48 34.24290941890199 35.0 34.0 39.0 27.0 41.0 49 34.258004853173404 35.0 34.0 39.0 27.0 41.0 50 34.109959822089046 35.0 34.0 39.0 26.0 41.0 51 33.84866618185589 35.0 33.0 39.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 2.0 11 2.0 12 1.0 13 7.0 14 26.0 15 56.0 16 143.0 17 338.0 18 855.0 19 1666.0 20 3076.0 21 4537.0 22 7293.0 23 10799.0 24 15504.0 25 22359.0 26 30250.0 27 36963.0 28 42462.0 29 49082.0 30 60034.0 31 75795.0 32 96842.0 33 131706.0 34 252283.0 35 392857.0 36 150560.0 37 184210.0 38 258841.0 39 408518.0 40 231.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.730046810909045 24.0258454502505 29.314633403939304 12.929474334901148 2 29.21464676826834 26.31481085004731 31.1582403603631 13.312302021321246 3 28.433883893033517 25.858769882791705 31.579864828080645 14.12748139609413 4 25.34645570395374 28.683783437081946 30.825115462886277 15.144645396078039 5 23.426461997256514 32.506115633180904 29.478536395895226 14.588885973667356 6 21.68704317125248 41.196549947056695 26.12914053955238 10.987266342138446 7 88.75528036261582 4.360659884977377 5.100927502314175 1.7831322500926339 8 90.69543230475676 2.7176072576799077 4.6684864204560945 1.918474017107235 9 87.39386197374603 3.5636720885317517 6.622047388391092 2.4204185493311354 10 59.42817656468805 17.20333312623838 11.556702970859059 11.811787338214517 11 51.245854934901416 18.562471980723185 16.80025781086927 13.391415273506132 12 45.07251824633185 19.49086822995049 21.617495024134012 13.819118499583649 13 21.42208082156207 42.1954776719607 21.98888034187652 14.393561164600706 14 15.298625708946368 43.69505372326184 26.546161241747303 14.460159326044487 15 13.717165206796231 20.73898035086057 51.02272874568844 14.52112569665476 16 15.388198001250617 15.541150288808067 48.52829237397415 20.542359335967163 17 16.45502009342515 16.303006437673282 27.4492591289765 39.79271433992506 18 22.356868706417874 21.82859778688499 33.16351547111048 22.65101803558666 19 31.245711905292943 22.73254491241448 23.15256029703674 22.86918288525584 20 32.87884185350281 21.579234603868326 22.203514148086597 23.33840939454226 21 23.149655008114696 27.767902278595752 25.707963039361303 23.37447967392825 22 23.901633174644964 24.03715372867015 23.300104277523925 28.761108819160963 23 21.191490274657077 31.134908655481453 22.349896013004965 25.323705056856504 24 21.48501384928881 23.41792491750097 36.9708295583201 18.126231674890125 25 18.266221904179996 23.54043871650593 34.952994660078964 23.24034471923511 26 17.90279260840862 34.127579728949954 25.44183857410208 22.52778908853935 27 19.189522723605563 32.06701473517845 27.12417964697611 21.619282894239884 28 16.277484591911946 27.54759198479953 38.04833417437723 18.126589248911298 29 16.48027375867061 23.63841399830778 37.356920107683415 22.524392135338193 30 19.9369865181185 28.033758563339095 30.772954352547426 21.25630056599498 31 29.982224101472355 24.578520796728558 23.311680736459454 22.127574365339637 32 32.07742907854516 24.96058863835366 24.14952136482428 18.812460918276905 33 28.73120669164023 25.32915806067942 24.31686600673401 21.622769240946337 34 20.610074916227113 25.03317616465211 28.395444685757248 25.961304233363535 35 21.058159861511584 24.507497656772742 31.001533545583314 23.432808936132364 36 31.877008839676773 22.25777600579985 25.208521525285622 20.656693629237754 37 21.858544611158365 29.69285732483678 27.53096479281491 20.91763327118995 38 22.08931394507395 31.74609205117421 22.285890263214707 23.878703740537137 39 21.586609568055053 31.375421881474047 24.320084172924584 22.71788437754632 40 25.5338691878019 24.207314265996633 23.624245127718734 26.634571418482732 41 18.440896813523807 23.245797723058025 25.232344894446385 33.08096056897178 42 22.980343709088505 26.349674317111837 22.762044769161385 27.907937204638273 43 23.225550094109014 26.978691717110674 24.050071090185085 25.745687098595226 44 21.49064564012231 30.052263912869936 26.505263713075454 21.9518267339323 45 18.297688418043364 34.76553647947816 21.678953059023403 25.257822043455075 46 22.37608831005601 30.9121847370423 25.69410704604078 21.017619906860908 47 23.33751545948932 25.408003132348426 26.57280050632481 24.68168090183744 48 24.993574841807018 20.70282067796928 30.065896422427222 24.23770805779648 49 20.702686587711344 21.43960194859963 31.953127409434323 25.90458405425471 50 19.159799383095418 31.819573512525594 25.53891992085099 23.481707183527995 51 18.932337608875702 33.44599894783844 22.991562594002858 24.630100849282996 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 405.0 1 1176.0 2 1947.0 3 5277.0 4 8607.0 5 6641.0 6 4675.0 7 5163.5 8 5652.0 9 6061.0 10 6470.0 11 6578.5 12 6687.0 13 6467.5 14 6248.0 15 6119.5 16 5991.0 17 5622.5 18 5254.0 19 4957.5 20 4661.0 21 5031.5 22 5402.0 23 4968.0 24 4534.0 25 6058.5 26 9194.5 27 10806.0 28 12416.5 29 14027.0 30 15813.0 31 17599.0 32 23427.0 33 29255.0 34 33689.5 35 38124.0 36 42011.5 37 45899.0 38 59947.0 39 73995.0 40 112461.0 41 150927.0 42 189281.0 43 227635.0 44 232750.5 45 237866.0 46 221101.5 47 204337.0 48 193145.5 49 181954.0 50 173366.5 51 164779.0 52 154874.0 53 144969.0 54 130481.5 55 115994.0 56 108518.0 57 101042.0 58 97051.5 59 93061.0 60 90263.5 61 87466.0 62 78258.5 63 69051.0 64 62054.5 65 55058.0 66 46470.0 67 37882.0 68 31277.0 69 24672.0 70 19762.0 71 14852.0 72 12406.5 73 9961.0 74 8395.0 75 4903.0 76 2977.0 77 2123.5 78 1270.0 79 906.0 80 542.0 81 370.5 82 199.0 83 131.5 84 64.0 85 45.0 86 26.0 87 21.5 88 17.0 89 21.5 90 26.0 91 21.0 92 16.0 93 9.5 94 3.0 95 2.5 96 2.0 97 1.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2237299.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.153799314879855 #Duplication Level Percentage of deduplicated Percentage of total 1 79.89021557407139 12.905305096060385 2 8.239645990790311 2.6620317552176216 3 2.564414426831887 1.2427510803367485 4 1.207715375319315 0.7803676720961207 5 0.7039916174112317 0.5686069653509358 6 0.4657125333413229 0.4513816081212014 7 0.35933983814248627 0.4063292541836593 8 0.2769912279261975 0.3579568566321551 9 0.20247839800399883 0.29437158662594703 >10 2.4719183786131813 9.906815566765456 >50 1.510390051694436 18.15289027404097 >100 2.09910667101607 50.97146963212086 >500 0.006965445550077284 0.7373556414936724 >1k 8.358534660092741E-4 0.2891723125555054 >5k 2.7861782200309135E-4 0.27319469839874205 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 6070 0.2713092885662578 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4310 0.1926430039078371 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.469675264682995E-5 0.0 0.0 0.04255130851978211 0.0 2 4.469675264682995E-5 0.0 0.0 0.1597014972071234 0.0 3 4.469675264682995E-5 0.0 0.0 0.24364199867787006 0.0 4 4.469675264682995E-5 0.0 0.0 0.44660995244712487 0.0 5 4.469675264682995E-5 0.0 0.0 0.7454971373964767 0.0 6 4.469675264682995E-5 0.0 0.0 1.1280566433006942 0.0 7 4.469675264682995E-5 0.0 0.0 1.3282980951584924 0.0 8 4.469675264682995E-5 0.0 0.0 1.8947400414517683 0.0 9 4.469675264682995E-5 0.0 0.0 2.1415555095675636 0.0 10 4.469675264682995E-5 0.0 0.0 2.5085158487980372 0.0 11 4.469675264682995E-5 0.0 0.0 2.872436808848527 0.0 12 4.469675264682995E-5 0.0 0.0 3.1727095931299303 0.0 13 4.469675264682995E-5 0.0 0.0 3.2907090201175615 0.0 14 4.469675264682995E-5 0.0 0.0 3.3324557870897005 0.0 15 4.469675264682995E-5 0.0 0.0 3.398338800491128 0.0 16 4.469675264682995E-5 0.0 0.0 3.551916842585636 0.0 17 4.469675264682995E-5 0.0 0.0 3.721853896148883 0.0 18 4.469675264682995E-5 0.0 0.0 3.9732284330346546 0.0 19 4.469675264682995E-5 0.0 0.0 4.0853278886729045 0.0 20 4.469675264682995E-5 0.0 0.0 4.209316680515211 0.0 21 4.469675264682995E-5 0.0 0.0 4.378270405520228 0.0 22 4.469675264682995E-5 0.0 0.0 4.545659744182606 0.0 23 4.469675264682995E-5 0.0 0.0 4.7478678531568645 0.0 24 4.469675264682995E-5 0.0 0.0 4.8910315518846605 0.0 25 4.469675264682995E-5 0.0 0.0 5.00581281268172 0.0 26 4.469675264682995E-5 0.0 0.0 5.1186721131149655 0.0 27 4.469675264682995E-5 0.0 0.0 5.226391286993826 0.0 28 4.469675264682995E-5 0.0 0.0 5.344658894497338 0.0 29 4.469675264682995E-5 0.0 0.0 5.4672173902549455 0.0 30 4.469675264682995E-5 0.0 0.0 5.619588620027989 0.0 31 4.469675264682995E-5 0.0 0.0 5.775759073776013 0.0 32 4.469675264682995E-5 0.0 0.0 5.911905382338257 0.0 33 4.469675264682995E-5 0.0 0.0 6.048230477911089 0.0 34 4.469675264682995E-5 0.0 0.0 6.191885840918 0.0 35 4.469675264682995E-5 0.0 0.0 6.392306079786385 0.0 36 4.469675264682995E-5 0.0 0.0 6.546152302396774 0.0 37 4.469675264682995E-5 0.0 0.0 6.702501543155385 0.0 38 4.469675264682995E-5 0.0 0.0 6.85160990998521 0.0 39 4.469675264682995E-5 0.0 0.0 7.016004566220251 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGCGTTA 30 2.1664273E-6 45.000004 19 ATTACGC 55 1.8189894E-12 45.000004 22 CGTCGGA 30 2.1664273E-6 45.000004 23 TACGTCA 30 2.1664273E-6 45.000004 27 AATCCGT 20 7.03472E-4 45.0 35 TCGTTAG 85 0.0 45.0 1 GTACCGA 25 3.8919934E-5 45.0 3 CGTATAT 20 7.03472E-4 45.0 44 ACGCATA 20 7.03472E-4 45.0 33 CTATACG 20 7.03472E-4 45.0 1 ACTTACG 25 3.8919934E-5 45.0 41 CTAACGA 40 6.8193913E-9 45.0 38 CGTAGGT 20 7.03472E-4 45.0 40 CGTAAGT 25 3.8919934E-5 45.0 17 CCGGTAA 20 7.03472E-4 45.0 29 GCGTAAG 150 0.0 45.0 1 TACCGGT 25 3.8919934E-5 45.0 40 TATCCGA 20 7.03472E-4 45.0 23 ACGTTAG 140 0.0 43.392857 1 TACGTAG 145 0.0 41.89655 1 >>END_MODULE