##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545365_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3035594 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.14991431660492 31.0 31.0 33.0 30.0 34.0 2 31.504052913531915 31.0 31.0 34.0 30.0 34.0 3 31.66216200190144 31.0 31.0 34.0 30.0 34.0 4 35.43697872640412 37.0 35.0 37.0 33.0 37.0 5 35.348603930565154 37.0 35.0 37.0 33.0 37.0 6 35.40354671935707 37.0 35.0 37.0 33.0 37.0 7 35.868191859649215 37.0 35.0 37.0 35.0 37.0 8 35.93543668883257 37.0 35.0 37.0 35.0 37.0 9 37.828093941416405 39.0 38.0 39.0 35.0 39.0 10 37.048227463883514 39.0 37.0 39.0 33.0 39.0 11 36.68360689868276 39.0 35.0 39.0 32.0 39.0 12 35.84117902459947 37.0 35.0 39.0 31.0 39.0 13 35.46856298964882 37.0 35.0 39.0 30.0 39.0 14 36.411650569871995 38.0 35.0 41.0 31.0 41.0 15 36.72109610178436 38.0 35.0 41.0 31.0 41.0 16 36.85445484475196 38.0 35.0 41.0 32.0 41.0 17 36.79587619424732 38.0 35.0 41.0 32.0 41.0 18 36.749201638954354 38.0 35.0 40.0 31.0 41.0 19 36.71565729804447 38.0 35.0 40.0 31.0 41.0 20 36.58827399184476 38.0 35.0 40.0 31.0 41.0 21 36.4605283183456 38.0 35.0 40.0 31.0 41.0 22 36.36284068291082 38.0 35.0 40.0 31.0 41.0 23 36.29652252573961 38.0 35.0 40.0 31.0 41.0 24 36.20683859567518 38.0 35.0 40.0 31.0 41.0 25 36.106397627614236 37.0 35.0 40.0 30.0 41.0 26 35.94102011006742 37.0 34.0 40.0 30.0 41.0 27 35.83253722335727 37.0 34.0 40.0 30.0 41.0 28 35.81989455770436 37.0 34.0 40.0 30.0 41.0 29 35.98056360633207 37.0 35.0 40.0 30.0 41.0 30 35.975890056443646 37.0 35.0 40.0 30.0 41.0 31 35.85280574411466 37.0 34.0 40.0 30.0 41.0 32 35.703224476000415 37.0 34.0 40.0 30.0 41.0 33 35.51938763879491 37.0 34.0 40.0 29.0 41.0 34 35.40974221190317 37.0 34.0 40.0 29.0 41.0 35 35.29395367101134 37.0 34.0 40.0 28.0 41.0 36 35.11372963578133 37.0 34.0 40.0 27.0 41.0 37 35.02565033400382 37.0 34.0 40.0 27.0 41.0 38 35.002090529892996 37.0 34.0 40.0 27.0 41.0 39 34.95634725855961 36.0 34.0 40.0 27.0 41.0 40 34.84326329542093 36.0 34.0 40.0 26.0 41.0 41 34.81878472549359 36.0 34.0 40.0 26.0 41.0 42 34.7634789105526 36.0 34.0 40.0 26.0 41.0 43 34.6340462525621 36.0 33.0 40.0 26.0 41.0 44 34.54303177565907 36.0 33.0 40.0 26.0 41.0 45 34.51203388858985 36.0 33.0 40.0 26.0 41.0 46 34.5349160658507 36.0 33.0 40.0 26.0 41.0 47 34.51886154736108 35.0 33.0 40.0 26.0 41.0 48 34.47464581890727 35.0 33.0 40.0 26.0 41.0 49 34.44050258367884 36.0 33.0 40.0 26.0 41.0 50 34.29968698053824 35.0 33.0 40.0 25.0 41.0 51 34.061422245530856 35.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 2.0 12 8.0 13 11.0 14 20.0 15 66.0 16 223.0 17 526.0 18 1226.0 19 2447.0 20 4411.0 21 7108.0 22 11309.0 23 16285.0 24 23583.0 25 33462.0 26 44276.0 27 52800.0 28 60108.0 29 70103.0 30 84925.0 31 104135.0 32 131105.0 33 169135.0 34 288755.0 35 432883.0 36 216556.0 37 265841.0 38 382047.0 39 631927.0 40 310.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.487943381097736 24.315471700102187 29.585807588234793 12.610777330565288 2 29.500980697682234 25.821404311643786 31.01735607594428 13.660258914729702 3 28.55866100670907 25.812773381420573 31.93071932544339 13.697846286426973 4 24.960024298374552 28.414076454229388 31.72963841673162 14.896260830664442 5 22.765000853210278 33.029087552551495 30.136704710840778 14.06920688339745 6 20.794974558521332 41.35954939955738 27.156266615364245 10.689209426557044 7 90.06741349469 3.6120113559323155 4.969571029590913 1.35100411978677 8 91.68274808818308 2.314637596463822 4.316585155985946 1.686029159367162 9 87.38918972695295 4.1863964680388746 6.14469523921842 2.27971856578976 10 49.404169332262484 23.968653252048856 14.486851667251946 12.140325748436714 11 43.503446113017745 22.804564773813627 19.39646738002513 14.295521733143495 12 37.58048671857963 22.50083509191282 24.527225972906784 15.39145221660077 13 21.106149241301704 39.6864995780068 24.736641329505858 14.470709851185633 14 17.375413181077576 40.5227115352053 27.056286183198413 15.045589100518713 15 16.095202454610202 24.547880908975312 44.37148050760411 14.985436128810376 16 17.417085420514073 20.045763695672083 42.73677573483147 19.800375148982376 17 18.05781669090135 21.12706771722437 27.326118051359966 33.48899754051431 18 22.960218000167348 24.02346954171078 32.313741560959734 20.702570897162136 19 29.005986966636517 25.769585787822745 24.189565534784954 21.034861710755788 20 30.890692233546385 24.02238243981244 24.296167405786147 20.79075792085503 21 22.971846696231445 28.504272969310122 27.28148098856435 21.242399345894082 22 24.17675090937721 25.491386529292125 24.50360621347914 25.828256347851525 23 20.924833821650722 31.04631251741834 23.949019532915138 24.0798341280158 24 21.02863558170164 25.987039109973203 34.90885144719616 18.07547386112899 25 18.687149862596907 27.035927729465797 33.10314225156592 21.17378015637137 26 19.15536135596526 33.8665183815754 26.009439997575434 20.968680264883908 27 19.45675212166054 32.01057190124898 27.78961876983549 20.74305720725499 28 16.814435659050584 28.3960569167023 35.80683055770963 18.98267686653749 29 17.51821883954178 24.605003172360995 35.311705056736834 22.565072931360387 30 20.00998816047205 29.284482707503045 30.006548965375472 20.698980166649427 31 27.645956606845317 27.035795959538728 24.19430925215954 21.123938181456413 32 28.969223156983443 27.171255444568676 24.927444183906015 18.932077214541863 33 26.5765118787295 27.55098343190822 24.451062955059207 21.421441734303073 34 20.347121518885594 27.448697026018632 28.155510914832483 24.048670540263288 35 21.29507437424109 26.816563743372797 29.371088492071074 22.517273390315044 36 29.421292834285477 25.211671916600174 25.49751383090097 19.86952141821337 37 21.781799542363043 30.689380727462236 28.05819882368986 19.47062090648486 38 21.872951389415054 31.83021181356927 24.49906015099516 21.797776646020512 39 21.483472427472186 31.221665347869315 26.243990467763478 21.050871756895027 40 24.183635888066718 26.78642137255509 24.780026577994292 24.2499161613839 41 19.30663323224384 24.63646324244942 26.68232313016826 29.374580395138477 42 22.991743955219306 26.54943315871622 23.85427695535042 26.604545930714053 43 22.574066228883048 27.67866849124092 25.79577506082829 23.951490219047738 44 21.13312913386968 30.592760428436737 26.646877019785915 21.627233417907664 45 19.17262321641168 34.32211290442661 22.950401140600487 23.554862738561216 46 22.426253313190102 32.074612085805946 24.98081100437015 20.518323596633806 47 22.448818913201173 26.909428599476744 26.99748385324256 23.644268634079523 48 23.873581249666458 23.58454391463417 29.102837863034388 23.439036972664987 49 21.602427729136373 23.656687949706054 30.563639274553843 24.17724504660373 50 20.267960735197132 31.38509299992028 26.235557192430868 22.11138907245172 51 19.79991395423762 31.68108119860561 24.179287480473345 24.339717366683423 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 434.0 1 1092.5 2 1751.0 3 6333.5 4 10916.0 5 8549.5 6 6183.0 7 6613.5 8 7044.0 9 7667.5 10 8291.0 11 8475.0 12 8659.0 13 8662.5 14 8666.0 15 8513.5 16 8361.0 17 7977.5 18 7594.0 19 7894.0 20 8194.0 21 9072.0 22 9950.0 23 10000.0 24 10050.0 25 13178.0 26 17629.5 27 18953.0 28 24205.0 29 29457.0 30 34156.0 31 38855.0 32 48756.5 33 58658.0 34 67361.0 35 76064.0 36 84747.0 37 93430.0 38 110718.0 39 128006.0 40 172223.0 41 216440.0 42 250136.5 43 283833.0 44 290618.0 45 297403.0 46 282873.5 47 268344.0 48 264511.0 49 260678.0 50 257957.5 51 255237.0 52 241834.5 53 228432.0 54 202690.5 55 176949.0 56 155824.0 57 134699.0 58 119574.5 59 104450.0 60 92923.5 61 81397.0 62 72153.5 63 62910.0 64 50952.0 65 38994.0 66 33446.0 67 27898.0 68 21839.5 69 15781.0 70 13235.0 71 10689.0 72 8911.5 73 7134.0 74 5542.0 75 2934.0 76 1918.0 77 1527.0 78 1136.0 79 1021.5 80 907.0 81 625.5 82 344.0 83 225.0 84 106.0 85 93.5 86 81.0 87 53.5 88 26.0 89 28.0 90 30.0 91 18.0 92 6.0 93 3.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3035594.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.12472186867161 #Duplication Level Percentage of deduplicated Percentage of total 1 78.38288969137946 14.990509646103995 2 8.809769728061942 3.3696879155245476 3 2.7734975427636677 1.5912710732639785 4 1.3069878945493238 0.9998311987590608 5 0.8304244781850594 0.7940818589113007 6 0.5568454071809678 0.638970812170992 7 0.43605288378368195 0.5837573085676572 8 0.3551869435428756 0.543428120531285 9 0.27995679297967463 0.4818686220883399 >10 3.442982803504735 15.649307607820267 >50 1.4189379239203668 19.838181026733483 >100 1.4010785042137581 39.414650355138875 >500 0.004520146912851997 0.5225694099460967 >1k 5.215554130213843E-4 0.15550404850276095 >5k 3.4770360868092287E-4 0.4263809959374399 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 7000 0.23059737237588426 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5824 0.1918570138167357 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.05112673170391034 0.0 2 0.0 0.0 0.0 0.17805411395595064 0.0 3 0.0 0.0 0.0 0.266998814729506 0.0 4 0.0 0.0 0.0 0.4261768866324021 0.0 5 0.0 0.0 0.0 0.7264805504293393 0.0 6 0.0 0.0 0.0 1.1172442691611593 0.0 7 0.0 0.0 0.0 1.3419449373005745 0.0 8 0.0 0.0 0.0 1.904701353343036 0.0 9 0.0 0.0 0.0 2.153417090691311 0.0 10 0.0 0.0 0.0 2.526358926786652 0.0 11 0.0 0.0 0.0 2.920680433549414 0.0 12 0.0 0.0 0.0 3.2337987227540967 0.0 13 0.0 0.0 0.0 3.375089027056978 0.0 14 0.0 0.0 0.0 3.4332325073774688 0.0 15 0.0 0.0 0.0 3.5196406370548896 0.0 16 0.0 0.0 0.0 3.7103776064915137 0.0 17 0.0 0.0 0.0 3.9471681654397788 0.0 18 0.0 0.0 0.0 4.240586850547207 0.0 19 0.0 0.0 0.0 4.403454480408118 0.0 20 0.0 0.0 0.0 4.563456114355214 0.0 21 0.0 0.0 0.0 4.797347734907896 0.0 22 0.0 0.0 0.0 5.033413559257266 0.0 23 0.0 0.0 0.0 5.314610583628773 0.0 24 0.0 0.0 0.0 5.526727223732818 0.0 25 0.0 0.0 0.0 5.709162687763911 0.0 26 0.0 0.0 0.0 5.888699213399421 0.0 27 0.0 0.0 0.0 6.060658968228294 0.0 28 0.0 0.0 0.0 6.252054787300278 0.0 29 0.0 0.0 0.0 6.457813528423102 0.0 30 0.0 0.0 0.0 6.716576722710613 0.0 31 0.0 0.0 0.0 6.938312567490909 0.0 32 0.0 0.0 0.0 7.150429207594955 0.0 33 0.0 0.0 0.0 7.357670360397339 0.0 34 0.0 0.0 0.0 7.584182865033993 0.0 35 0.0 0.0 0.0 7.859582012614335 0.0 36 3.294248176798347E-5 0.0 0.0 8.094330137692985 0.0 37 3.294248176798347E-5 0.0 0.0 8.334645542190424 0.0 38 3.294248176798347E-5 0.0 0.0 8.57716809296632 0.0 39 3.294248176798347E-5 0.0 0.0 8.821436595275916 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGTTAC 35 1.2128112E-7 45.000004 33 GTCGACG 45 3.8562575E-10 45.0 1 TACGACG 85 0.0 45.0 1 CCGCGTA 20 7.035118E-4 45.0 14 GTCGGTA 25 3.8923237E-5 45.0 26 TACCGGA 25 3.8923237E-5 45.0 21 CGAACGT 30 2.1666838E-6 44.999996 38 ACGCTAA 30 2.1666838E-6 44.999996 38 CGTTTTT 6860 0.0 41.424927 1 TATAGCG 170 0.0 41.02941 1 TACGGGA 795 0.0 40.4717 4 TCTAGCG 130 0.0 39.80769 1 GCGTATG 245 0.0 39.489796 1 GACGTGC 40 3.4607183E-7 39.375 9 TATTACG 160 0.0 39.375 1 CTTAACG 75 0.0 39.000004 1 AATACGG 225 0.0 39.0 2 CGTTAGG 365 0.0 38.835617 2 GGCACCG 1125 0.0 38.6 8 GCGATCG 35 6.2516774E-6 38.57143 9 >>END_MODULE