##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545364_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 4192072 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.252383069756437 31.0 31.0 33.0 30.0 34.0 2 31.61970977597713 31.0 31.0 34.0 30.0 34.0 3 31.69676546586032 31.0 31.0 34.0 30.0 34.0 4 35.55192086395463 37.0 35.0 37.0 33.0 37.0 5 35.49615488474435 37.0 35.0 37.0 33.0 37.0 6 35.557285991271144 37.0 35.0 37.0 33.0 37.0 7 35.906304805833486 37.0 35.0 37.0 35.0 37.0 8 35.94931098511667 37.0 35.0 37.0 35.0 37.0 9 37.84085745664674 39.0 38.0 39.0 35.0 39.0 10 37.210206551795864 39.0 37.0 39.0 33.0 39.0 11 36.89266071765943 39.0 37.0 39.0 33.0 39.0 12 36.451317630040705 39.0 35.0 39.0 32.0 39.0 13 36.28269170949354 39.0 35.0 39.0 32.0 39.0 14 37.3009817102378 39.0 35.0 41.0 32.0 41.0 15 37.46057295771637 39.0 35.0 41.0 32.0 41.0 16 37.4930943457078 39.0 35.0 41.0 32.0 41.0 17 37.40329436135639 39.0 35.0 41.0 32.0 41.0 18 37.28936573608468 39.0 35.0 41.0 32.0 41.0 19 37.206081622643886 39.0 35.0 41.0 32.0 41.0 20 37.044276672728905 39.0 35.0 41.0 32.0 41.0 21 36.9460359936566 39.0 35.0 41.0 31.0 41.0 22 36.84517179094252 38.0 35.0 41.0 31.0 41.0 23 36.71859977595805 38.0 35.0 41.0 31.0 41.0 24 36.632796144722704 38.0 35.0 40.0 31.0 41.0 25 36.50073328893206 38.0 35.0 40.0 31.0 41.0 26 36.38664698507087 38.0 35.0 40.0 31.0 41.0 27 36.262493821671 38.0 35.0 40.0 30.0 41.0 28 36.16623474024301 38.0 35.0 40.0 30.0 41.0 29 36.233804906022606 38.0 35.0 40.0 30.0 41.0 30 36.17335914077812 38.0 35.0 40.0 30.0 41.0 31 36.0275956615249 38.0 35.0 40.0 30.0 41.0 32 35.83523231471215 38.0 35.0 40.0 29.0 41.0 33 35.54186545460097 38.0 34.0 40.0 27.0 41.0 34 35.26284496067816 38.0 34.0 40.0 26.0 41.0 35 35.038687074076975 38.0 34.0 40.0 25.0 41.0 36 34.87786206916294 38.0 34.0 40.0 24.0 41.0 37 34.75049211941016 38.0 34.0 40.0 24.0 41.0 38 34.63661287306134 37.0 33.0 40.0 24.0 41.0 39 34.55017304092105 37.0 33.0 40.0 23.0 41.0 40 34.42954128650462 37.0 33.0 40.0 23.0 41.0 41 34.32317670116353 37.0 33.0 40.0 23.0 41.0 42 34.235777200391595 37.0 33.0 40.0 23.0 41.0 43 34.1054731407285 37.0 33.0 40.0 23.0 41.0 44 33.96999693707551 36.0 33.0 40.0 22.0 41.0 45 33.928161300664684 36.0 33.0 40.0 22.0 41.0 46 33.92385793946287 36.0 33.0 40.0 23.0 41.0 47 33.8784195500459 36.0 33.0 40.0 23.0 41.0 48 33.79072878519262 36.0 33.0 40.0 22.0 41.0 49 33.73095905795511 36.0 33.0 40.0 22.0 41.0 50 33.620490774013426 35.0 33.0 40.0 22.0 41.0 51 33.38328253904036 35.0 32.0 40.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 1.0 10 6.0 11 2.0 12 5.0 13 21.0 14 61.0 15 121.0 16 342.0 17 900.0 18 1964.0 19 3999.0 20 7024.0 21 11104.0 22 17168.0 23 25414.0 24 38206.0 25 56860.0 26 78026.0 27 89052.0 28 93009.0 29 99397.0 30 113018.0 31 134115.0 32 163727.0 33 210031.0 34 327929.0 35 428288.0 36 340427.0 37 430370.0 38 602491.0 39 918639.0 40 352.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.598921965080756 23.446472293414807 26.67246650343792 16.282139238066524 2 34.933536446893086 24.175515115198404 27.78318215908505 13.107766278823455 3 28.948262339005627 25.09348598974445 32.42637531034772 13.531876360902197 4 25.830138413653202 27.394734632420437 31.99014711579381 14.78497983813255 5 23.405537881982944 31.278351135190423 30.89259917291497 14.423511809911663 6 21.838603917108294 39.83500283392079 27.927502199389703 10.39889104958121 7 86.17468879351308 3.3254438377966795 8.787897726947438 1.7119696417427948 8 86.84951021833595 2.599287416819177 8.72000767162396 1.831194693220918 9 82.18961888059174 4.45667440826398 10.463918558650711 2.8897881524935642 10 41.71963172388261 28.11769454341433 17.328256766582253 12.83441696612081 11 33.29694718983834 25.502853958615212 25.355146571910026 15.845052279636418 12 28.822405722039125 23.35682688656111 30.12992143264715 17.690845958752615 13 23.59057764275041 28.097465883219563 31.36060163088802 16.951354843142006 14 20.74544521181888 29.60750674129643 32.168722292937716 17.478325753946976 15 20.102827432353262 23.691935634693298 38.20585619712639 17.999380735827057 16 23.083692264827512 21.799387033428815 36.099046008751756 19.017874692991914 17 22.661108874084224 22.084997585919325 30.65558034308571 24.59831319691074 18 24.886977132072158 22.917998545826503 31.95901692528182 20.23600739681952 19 27.34342349081791 24.43646006080048 28.114569597087076 20.10554685129454 20 29.153387632655164 24.18317242642779 27.410216236744024 19.25322370417302 21 26.550617451226984 24.927720707087094 28.94508968357414 19.576572158111787 22 25.669525714253 22.985697764733047 28.586698892576273 22.75807762843768 23 23.103205288458785 26.85974859210433 28.384889381670924 21.652156737765953 24 22.46347390979926 24.859496688033982 32.89454475018559 19.782484651981168 25 22.265361854471966 25.310204595722592 31.256452656347506 21.167980893457937 26 21.852129448158333 27.79983263646235 28.823240631363202 21.524797284016113 27 21.799506306189397 25.984167256669256 30.301531080573042 21.914795356568302 28 20.728055243325976 26.536805665551544 32.435392331047744 20.299746760074733 29 21.551275836865397 24.88366134932797 31.96388325391358 21.601179559893055 30 23.24315994572612 25.368886793929114 30.9605607918948 20.42739246844997 31 25.53980465984363 25.754829592621505 27.842031339156385 20.86333440837848 32 26.034643488947708 25.96367619640121 27.375531717966677 20.626148596684406 33 25.10999333980905 26.042253091072865 27.324626103750127 21.52312746536796 34 22.046066956865246 26.915854498682272 29.451092443068728 21.586986101383754 35 22.986174855775378 26.87709085149301 29.19234211626136 20.94439217647025 36 26.33950466499621 27.034435477253254 25.999791988305542 20.626267869444987 37 23.89147896314758 27.81564820451557 26.819625235444427 21.47324759689242 38 23.325839823361814 28.5201208376192 25.859551076412814 22.294488262606176 39 23.177989309343925 27.53430761685391 26.199216043999247 23.088487029802923 40 24.892272842642015 25.447201288527488 26.73162579268677 22.92890007614373 41 21.736577997706146 25.170249938455257 27.672163073534996 25.4210089903036 42 23.44888160317857 26.785942607855972 26.08194706579467 23.683228723170785 43 23.109502890217534 25.848244018709604 27.467443307271438 23.574809783801424 44 22.65552690888897 27.93313187368919 27.409906127566515 22.001435089855327 45 21.880587928833283 28.115476070067498 26.48205946844425 23.52187653265497 46 23.284905411929948 27.62860466137032 27.111342553276756 21.975147373422978 47 22.952349100874223 26.756577654200598 28.473652170096315 21.817421074828864 48 23.44420611096374 25.9255804766712 28.189043508794697 22.44116990357036 49 22.745267733951135 25.274542040308468 28.90374974475629 23.076440480984107 50 22.011716401817527 28.001451310950763 27.584211339881566 22.40262094735014 51 21.88189992919969 27.78461343221204 26.98949350106582 23.34399313752245 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1279.0 1 2965.0 2 4651.0 3 29894.5 4 55138.0 5 39641.5 6 24145.0 7 23792.5 8 23440.0 9 24253.0 10 25066.0 11 25119.0 12 25172.0 13 24848.5 14 24525.0 15 23748.5 16 22972.0 17 22436.5 18 21901.0 19 21017.0 20 20133.0 21 20888.0 22 21643.0 23 22090.5 24 22538.0 25 24915.0 26 31203.0 27 35114.0 28 40602.5 29 46091.0 30 54488.0 31 62885.0 32 73873.5 33 84862.0 34 98157.5 35 111453.0 36 120006.5 37 128560.0 38 140193.0 39 151826.0 40 181810.5 41 211795.0 42 234302.0 43 256809.0 44 269820.0 45 282831.0 46 289654.5 47 296478.0 48 301498.0 49 306518.0 50 308379.5 51 310241.0 52 290045.0 53 269849.0 54 252340.0 55 234831.0 56 225195.0 57 215559.0 58 201966.5 59 188374.0 60 175871.5 61 163369.0 62 152508.5 63 141648.0 64 129243.5 65 116839.0 66 101270.5 67 85702.0 68 72759.5 69 59817.0 70 49921.0 71 40025.0 72 34533.5 73 29042.0 74 24491.5 75 15454.0 76 10967.0 77 8196.5 78 5426.0 79 4085.0 80 2744.0 81 2095.0 82 1446.0 83 1057.0 84 668.0 85 471.0 86 274.0 87 179.0 88 84.0 89 63.5 90 43.0 91 36.5 92 30.0 93 25.0 94 20.0 95 16.0 96 12.0 97 7.0 98 2.0 99 2.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 4192072.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.26267379820719 #Duplication Level Percentage of deduplicated Percentage of total 1 78.90323734287512 16.776937972440738 2 6.828682440890475 2.9039209442439886 3 2.299075194009271 1.466534576633071 4 1.281832000081027 1.090207027273055 5 0.8507541666041533 0.9044654163484862 6 0.6138578946178298 0.7831356103027894 7 0.5148708694372803 0.7663271941530949 8 0.3980628819777872 0.6771104968534349 9 0.356895751852663 0.6829702156448165 >10 5.379565122972265 29.049348692242415 >50 2.165025803567878 32.26091408100765 >100 0.403944073047606 11.041092717060655 >500 0.0026086090684556912 0.37106756468326185 >1k 0.0014744312126000487 0.5010509385456644 >5k 0.0 0.0 >10k+ 1.1341778558461913E-4 0.7249165525669091 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 30060 0.7170678366211267 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.385455211647128E-5 0.0 0.0 0.032227499909352704 0.0 2 2.385455211647128E-5 0.0 0.0 0.10476919289554187 0.0 3 2.385455211647128E-5 0.0 0.0 0.19341270856034914 0.0 4 2.385455211647128E-5 0.0 0.0 0.29109709947729906 0.0 5 2.385455211647128E-5 0.0 0.0 0.5112984700644455 0.0 6 2.385455211647128E-5 0.0 0.0 0.9562574306929843 0.0 7 2.385455211647128E-5 0.0 0.0 1.2250743784934992 0.0 8 2.385455211647128E-5 0.0 0.0 1.7239684814573795 0.0 9 2.385455211647128E-5 0.0 0.0 2.0457902440606937 0.0 10 2.385455211647128E-5 0.0 0.0 2.407425254146398 0.0 11 2.385455211647128E-5 0.0 0.0 2.7076825016364223 0.0 12 2.385455211647128E-5 0.0 0.0 2.9419819125244033 0.0 13 2.385455211647128E-5 0.0 0.0 3.080052060174539 0.0 14 2.385455211647128E-5 0.0 0.0 3.1676459755462214 0.0 15 2.385455211647128E-5 0.0 0.0 3.2416427962115155 0.0 16 2.385455211647128E-5 0.0 0.0 3.3640882122253624 0.0 17 2.385455211647128E-5 0.0 0.0 3.494453339541878 0.0 18 2.385455211647128E-5 0.0 0.0 3.6601947676471207 0.0 19 2.385455211647128E-5 0.0 0.0 3.7625785053310152 2.385455211647128E-5 20 2.385455211647128E-5 0.0 0.0 3.8692560623958747 2.385455211647128E-5 21 2.385455211647128E-5 0.0 0.0 3.9955182067483572 2.385455211647128E-5 22 2.385455211647128E-5 0.0 0.0 4.138573955790836 2.385455211647128E-5 23 2.385455211647128E-5 0.0 0.0 4.299138946086804 2.385455211647128E-5 24 2.385455211647128E-5 0.0 0.0 4.430386691831629 2.385455211647128E-5 25 2.385455211647128E-5 0.0 0.0 4.547369415410804 2.385455211647128E-5 26 2.385455211647128E-5 0.0 0.0 4.662610756685477 2.385455211647128E-5 27 2.385455211647128E-5 0.0 0.0 4.785819518367051 2.385455211647128E-5 28 2.385455211647128E-5 0.0 0.0 4.910364134967147 2.385455211647128E-5 29 2.385455211647128E-5 0.0 0.0 5.04595340919717 2.385455211647128E-5 30 2.385455211647128E-5 0.0 0.0 5.222381676650592 2.385455211647128E-5 31 2.385455211647128E-5 0.0 0.0 5.370351463429063 2.385455211647128E-5 32 2.385455211647128E-5 0.0 0.0 5.5409830747181825 2.385455211647128E-5 33 2.385455211647128E-5 0.0 0.0 5.689119843361469 2.385455211647128E-5 34 2.385455211647128E-5 0.0 0.0 5.846536032778063 2.385455211647128E-5 35 2.385455211647128E-5 0.0 0.0 6.020316444946556 2.385455211647128E-5 36 2.385455211647128E-5 0.0 0.0 6.182789799411842 2.385455211647128E-5 37 2.385455211647128E-5 0.0 0.0 6.3425914440400835 2.385455211647128E-5 38 2.385455211647128E-5 0.0 0.0 6.5309946966559735 2.385455211647128E-5 39 2.385455211647128E-5 0.0 0.0 6.7934186244892745 2.385455211647128E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 24225 0.0 42.39938 1 CGATCGA 75 0.0 39.0 10 GCGATAA 500 0.0 38.7 9 AGGGCGA 5095 0.0 38.06673 6 GGGCGAT 10245 0.0 38.060028 7 AACACGT 2365 0.0 38.054966 41 CACGACC 2555 0.0 37.778866 27 GCGATAT 555 0.0 37.7027 9 GCGAGAC 2575 0.0 37.660194 21 CGTTAGG 425 0.0 37.588238 2 AGACACG 2595 0.0 37.456646 24 GGCGATA 2190 0.0 37.39726 8 TCAAGCG 2610 0.0 37.241383 17 CACGTGA 2425 0.0 37.02062 43 GTCAAGC 2645 0.0 36.748585 16 GACCGAT 2555 0.0 36.722115 9 ACACGAC 2625 0.0 36.600002 26 TAGGGAC 3280 0.0 36.5625 5 ACGACCA 2615 0.0 36.481834 28 CGAGACA 2640 0.0 36.477272 22 >>END_MODULE