##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545363_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 4081594 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.19461195797524 31.0 31.0 33.0 30.0 34.0 2 31.55702723004787 31.0 31.0 34.0 30.0 34.0 3 31.721518602781167 31.0 31.0 34.0 30.0 34.0 4 35.517934169836586 37.0 35.0 37.0 33.0 37.0 5 35.42796025278359 37.0 35.0 37.0 33.0 37.0 6 35.49017491695646 37.0 35.0 37.0 33.0 37.0 7 35.85236846192934 37.0 35.0 37.0 35.0 37.0 8 35.899278076163384 37.0 35.0 37.0 35.0 37.0 9 37.781816858805655 39.0 37.0 39.0 35.0 39.0 10 37.11232596872692 39.0 37.0 39.0 33.0 39.0 11 36.77015082832835 39.0 35.0 39.0 32.0 39.0 12 36.08439619423196 38.0 35.0 39.0 32.0 39.0 13 35.78569965557574 37.0 35.0 39.0 31.0 39.0 14 36.777813030889405 39.0 35.0 41.0 31.0 41.0 15 37.014840525539775 39.0 35.0 41.0 32.0 41.0 16 37.092482495809236 38.0 35.0 41.0 32.0 41.0 17 37.039141080666035 38.0 35.0 41.0 32.0 41.0 18 36.980505655388555 38.0 35.0 41.0 32.0 41.0 19 36.940020246991736 38.0 35.0 41.0 32.0 41.0 20 36.81657019291973 38.0 35.0 41.0 31.0 41.0 21 36.69584260462947 38.0 35.0 41.0 31.0 41.0 22 36.57296414097041 38.0 35.0 40.0 31.0 41.0 23 36.497611962385285 38.0 35.0 40.0 31.0 41.0 24 36.39048028784833 38.0 35.0 40.0 31.0 41.0 25 36.27678622616556 38.0 35.0 40.0 30.0 41.0 26 36.1069342026669 38.0 35.0 40.0 30.0 41.0 27 35.98899915082196 38.0 35.0 40.0 30.0 41.0 28 35.89297367646071 38.0 35.0 40.0 30.0 41.0 29 36.04693068443358 38.0 35.0 40.0 30.0 41.0 30 36.03659305653625 38.0 35.0 40.0 30.0 41.0 31 35.94016749338616 38.0 35.0 40.0 30.0 41.0 32 35.790735923269196 38.0 34.0 40.0 30.0 41.0 33 35.605390688049816 38.0 34.0 40.0 29.0 41.0 34 35.46881953472099 37.0 34.0 40.0 28.0 41.0 35 35.344365951145555 37.0 34.0 40.0 27.0 41.0 36 35.20216856453631 37.0 34.0 40.0 27.0 41.0 37 35.08388242436656 37.0 34.0 40.0 27.0 41.0 38 35.039072970021024 37.0 34.0 40.0 27.0 41.0 39 34.989071426506406 37.0 34.0 40.0 26.0 41.0 40 34.85420352930742 37.0 34.0 40.0 26.0 41.0 41 34.80599368776022 37.0 34.0 40.0 26.0 41.0 42 34.74521106214876 36.0 33.0 40.0 26.0 41.0 43 34.629424435649405 36.0 33.0 40.0 26.0 41.0 44 34.5290634002304 36.0 33.0 40.0 25.0 41.0 45 34.48354270414941 36.0 33.0 40.0 25.0 41.0 46 34.487383605522744 36.0 33.0 40.0 25.0 41.0 47 34.45823298446636 36.0 33.0 40.0 25.0 41.0 48 34.385116942057444 36.0 33.0 40.0 25.0 41.0 49 34.34229592654243 36.0 33.0 40.0 25.0 41.0 50 34.216471309983305 35.0 33.0 40.0 24.0 41.0 51 33.97539588699905 35.0 33.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 7.0 11 2.0 12 7.0 13 11.0 14 34.0 15 122.0 16 314.0 17 750.0 18 1851.0 19 3500.0 20 6232.0 21 9903.0 22 14968.0 23 21690.0 24 31431.0 25 44683.0 26 59103.0 27 70256.0 28 79611.0 29 92968.0 30 111885.0 31 137349.0 32 170992.0 33 221991.0 34 370718.0 35 518948.0 36 309655.0 37 385845.0 38 546297.0 39 869956.0 40 514.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.067742651522906 24.522576228796886 29.17396977749379 13.23571134218641 2 30.544169753287566 26.22073631037286 29.724416490224165 13.510677446115416 3 29.223803249416775 25.885891639393826 31.202441987125617 13.687863124063785 4 26.053473226391453 28.492912327879743 30.28292377928819 15.170690666440612 5 23.384442450670008 32.894869014409565 29.407285486993562 14.313403047926865 6 22.06956399877107 41.890104699291506 25.513071608788135 10.527259693149293 7 88.87694366465651 3.9768286605674157 5.54131547625756 1.60491219851852 8 90.12361347061957 2.9589665214129575 5.051678339393874 1.8657416685736012 9 85.06385005466002 4.962325993227156 7.201916702151169 2.7719072499616573 10 47.07347178577781 28.317490666636612 12.679433574235949 11.929603973349627 11 40.0306350901143 23.131747057644635 21.255935793711966 15.581682058529095 12 35.83911089638019 22.293300117552114 25.571970166557477 16.29561881951022 13 23.50645360611565 33.97001269602023 25.429525817609495 17.094007880254626 14 19.071593107986732 36.70529209911618 26.795707755352442 17.427407037544647 15 18.485915061615636 24.22533941396425 40.34730058893658 16.94144493548354 16 19.778375801218836 20.58526644247321 39.24503515048288 20.391322605825078 17 20.46176077287452 21.271150437794645 27.427348236987804 30.83974055234303 18 23.46362720054959 23.984159129986963 30.50237235746622 22.049841311997227 19 28.659905909308964 25.26860829372054 24.744082826464368 21.32740297050613 20 30.79262660617396 23.964607944837237 24.183713519767032 21.05905192922177 21 25.58907132850548 26.261480196217455 26.10230218880173 22.047146286475332 22 24.98340109280835 24.91171341392603 24.626800215798045 25.478085277467578 23 23.03100210358992 29.12808084292558 24.101417240421267 23.73949981306323 24 22.6927519003605 25.107690769831592 32.86654674619769 19.33301058361023 25 21.30836629022877 26.245702046798385 30.111373154703774 22.334558508269073 26 20.766960163112742 31.09118643353553 25.70743194938056 22.43442145397117 27 21.912003006668474 28.83317155013458 27.528313693130674 21.726511750066273 28 18.890168889899385 27.794141210517264 33.059216570780926 20.256473328802425 29 20.132379653635322 24.483522858961475 32.18553829704767 23.19855919035553 30 21.408155735234814 28.051932651802215 28.804481778442444 21.735429834520534 31 27.772875009126334 26.444986934026264 23.64982896388029 22.13230909296711 32 28.18053436966048 26.43058079760015 24.74729235685862 20.641592475880746 33 26.02595946583614 27.811340373393335 24.428691339706987 21.734008821063536 34 21.32269892595883 26.863646898736132 27.773683516782903 24.039970658522137 35 22.52267128969711 26.28977796419732 28.330598290765813 22.85695245533975 36 27.91289383510462 26.29676053032222 24.637212814405352 21.15313282016781 37 22.943903778768785 30.3403523231365 26.275028824522966 20.440715073571745 38 22.12319500665671 30.20035799739024 24.55891007287839 23.11753692307466 39 22.584534375540535 30.157531591824178 25.049331217166625 22.208602815468662 40 24.06990994204715 26.5459033897051 25.516991645910885 23.867195022336862 41 19.916459108867762 25.171293372148234 26.509986049567893 28.402261469416118 42 22.54856803493929 27.104533179929213 24.22244838658622 26.124450398545275 43 23.44804505298665 26.780027606861438 25.43476886726117 24.33715847289074 44 22.63502935372798 29.182324356611655 25.86166090992882 22.320985379731546 45 20.559369697231034 31.62357647526922 23.095903218203475 24.72115060929627 46 23.04947527853089 29.845619138013234 25.483793831527585 21.62111175192829 47 23.420041287790998 26.27738084679662 26.610216498750244 23.692361366662144 48 24.025540021864007 23.544428965742306 28.314893642042787 24.115137370350897 49 21.93268120249099 24.727545169852757 28.63072613297648 24.709047494679776 50 20.65389159235338 29.497764843833068 26.813690925653066 23.034652638160484 51 20.587324461962655 30.008055676287253 24.66382006637603 24.740799795374063 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1059.0 1 2648.0 2 4237.0 3 13003.0 4 21769.0 5 16401.5 6 11034.0 7 11164.5 8 11295.0 9 11885.0 10 12475.0 11 12728.5 12 12982.0 13 13033.5 14 13085.0 15 12945.0 16 12805.0 17 12090.5 18 11376.0 19 11405.0 20 11434.0 21 12373.0 22 13312.0 23 13832.0 24 14352.0 25 16402.5 26 22574.5 27 26696.0 28 30372.0 29 34048.0 30 44390.5 31 54733.0 32 63611.5 33 72490.0 34 84071.5 35 95653.0 36 108817.5 37 121982.0 38 138153.0 39 154324.0 40 199986.5 41 245649.0 42 283419.0 43 321189.0 44 333062.0 45 344935.0 46 341216.5 47 337498.0 48 335945.0 49 334392.0 50 319842.0 51 305292.0 52 286448.5 53 267605.0 54 248306.5 55 229008.0 56 213172.0 57 197336.0 58 190588.5 59 183841.0 60 173809.5 61 163778.0 62 143549.0 63 123320.0 64 109291.5 65 95263.0 66 82419.5 67 69576.0 68 57561.0 69 45546.0 70 39891.0 71 34236.0 72 28825.0 73 23414.0 74 19844.5 75 11863.0 76 7451.0 77 5605.0 78 3759.0 79 2619.5 80 1480.0 81 1104.0 82 728.0 83 468.5 84 209.0 85 152.5 86 96.0 87 80.0 88 64.0 89 45.5 90 27.0 91 21.0 92 15.0 93 14.0 94 13.0 95 8.5 96 4.0 97 2.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 4081594.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.951136882082537 #Duplication Level Percentage of deduplicated Percentage of total 1 78.5305966512897 14.09713489918914 2 8.680395589329471 3.1164593882935776 3 2.808913384529376 1.5126956596680172 4 1.3651094020209078 0.9802106293878063 5 0.8169460994761873 0.7332555628490228 6 0.5626817816873625 0.6060466610474355 7 0.4222851142922169 0.5306348522947818 8 0.3450870919104672 0.4955764498499676 9 0.2796451903120434 0.45179541807367607 >10 3.1880043366607445 13.78907604371144 >50 1.3865528905266435 18.111092864347622 >100 1.6057917831817041 43.90747104195744 >500 0.005924128373818462 0.6956931001831039 >1k 0.001791015554875349 0.5316500026532593 >5k 1.3777042729810378E-4 0.1581817656868515 >10k+ 1.3777042729810378E-4 0.28302566080680563 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 11444 0.28038065520480476 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 6396 0.15670348398199332 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.04652594060065749 0.0 2 0.0 0.0 0.0 0.13423677122222347 0.0 3 0.0 0.0 0.0 0.20597345056857688 0.0 4 0.0 0.0 0.0 0.34800129557226905 0.0 5 0.0 0.0 0.0 0.6220118904526026 0.0 6 0.0 0.0 0.0 1.0293282477385062 0.0 7 0.0 0.0 0.0 1.2511288481901923 0.0 8 0.0 0.0 0.0 1.8155896936343987 0.0 9 0.0 0.0 0.0 2.0926138170528477 0.0 10 0.0 0.0 0.0 2.4784924713237033 0.0 11 0.0 0.0 0.0 2.843055923739598 0.0 12 0.0 0.0 0.0 3.163886462004795 0.0 13 0.0 0.0 0.0 3.3084378309062585 0.0 14 0.0 0.0 0.0 3.3724324369351777 0.0 15 0.0 0.0 0.0 3.4540672100164787 0.0 16 2.4500232017197202E-5 0.0 0.0 3.614372228105 0.0 17 2.4500232017197202E-5 0.0 0.0 3.815347631342069 0.0 18 2.4500232017197202E-5 0.0 0.0 4.060839956154385 0.0 19 2.4500232017197202E-5 0.0 0.0 4.199241766819532 0.0 20 2.4500232017197202E-5 0.0 0.0 4.351510708806412 0.0 21 2.4500232017197202E-5 0.0 0.0 4.540505498587072 0.0 22 2.4500232017197202E-5 0.0 0.0 4.753118512032309 0.0 23 2.4500232017197202E-5 0.0 0.0 4.984278201114565 0.0 24 2.4500232017197202E-5 0.0 0.0 5.174498002496084 0.0 25 2.4500232017197202E-5 0.0 0.0 5.330809482765802 0.0 26 2.4500232017197202E-5 0.0 0.0 5.479501390878172 0.0 27 2.4500232017197202E-5 0.0 0.0 5.629761313839642 0.0 28 2.4500232017197202E-5 0.0 0.0 5.789012821951424 0.0 29 2.4500232017197202E-5 0.0 0.0 5.967668513820826 0.0 30 2.4500232017197202E-5 0.0 0.0 6.190939128193544 0.0 31 2.4500232017197202E-5 0.0 0.0 6.385152467393866 0.0 32 2.4500232017197202E-5 0.0 0.0 6.576327777824056 0.0 33 2.4500232017197202E-5 0.0 0.0 6.766131075261283 0.0 34 2.4500232017197202E-5 0.0 0.0 6.963137440911566 0.0 35 4.9000464034394404E-5 0.0 0.0 7.195424140666612 0.0 36 4.9000464034394404E-5 0.0 0.0 7.398433063161108 0.0 37 4.9000464034394404E-5 2.4500232017197202E-5 0.0 7.600143473358693 0.0 38 4.9000464034394404E-5 2.4500232017197202E-5 0.0 7.814103999564876 0.0 39 4.9000464034394404E-5 2.4500232017197202E-5 0.0 8.029118035747798 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACGTCA 20 7.035405E-4 45.0 13 CGGTCTA 150 0.0 42.0 31 ACGTTAG 215 0.0 40.813953 1 CGTTTTT 10635 0.0 40.049366 1 TCGTTGA 810 0.0 39.72222 24 CGTATGG 380 0.0 39.67105 2 ACGTACG 125 0.0 39.6 1 TCGAATC 40 3.4611185E-7 39.375 18 CGTATGA 145 0.0 38.793106 15 ACGTATG 145 0.0 38.793106 1 TAACGCG 70 0.0 38.57143 1 TCGAACA 35 6.2522067E-6 38.57143 1 ACGTAGG 515 0.0 38.00971 2 GTATGCG 225 0.0 38.0 1 GGCGATA 2200 0.0 37.738636 8 TAGGGCG 1835 0.0 37.64305 5 GCTACGA 395 0.0 37.594936 10 GCGATAT 545 0.0 37.56881 9 TCGTACT 30 1.14043236E-4 37.499996 45 CGACTAT 30 1.14043236E-4 37.499996 29 >>END_MODULE