##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545362_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1277376 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.14527202640413 31.0 31.0 33.0 30.0 34.0 2 31.50639357557994 31.0 31.0 34.0 30.0 34.0 3 31.511465692168947 31.0 31.0 34.0 30.0 34.0 4 35.408676067187734 37.0 35.0 37.0 33.0 37.0 5 35.36151532516659 37.0 35.0 37.0 33.0 37.0 6 35.43314262989128 37.0 35.0 37.0 33.0 37.0 7 35.864270974247205 37.0 35.0 37.0 35.0 37.0 8 35.91793097725337 37.0 35.0 37.0 35.0 37.0 9 37.80414459015983 39.0 37.0 39.0 35.0 39.0 10 37.04489985720728 39.0 37.0 39.0 33.0 39.0 11 36.76420881557192 39.0 37.0 39.0 32.0 39.0 12 36.375660729495465 38.0 35.0 39.0 32.0 39.0 13 36.276424482689514 39.0 35.0 39.0 32.0 39.0 14 37.33589640012025 39.0 36.0 41.0 32.0 41.0 15 37.46881341124305 39.0 36.0 41.0 32.0 41.0 16 37.4734995803898 39.0 35.0 41.0 32.0 41.0 17 37.381116444962174 39.0 35.0 41.0 32.0 41.0 18 37.20017676862568 39.0 36.0 41.0 32.0 41.0 19 37.076243799789566 38.0 35.0 41.0 32.0 41.0 20 36.869641358535 38.0 35.0 41.0 31.0 41.0 21 36.78646303046245 38.0 35.0 41.0 31.0 41.0 22 36.690562528182774 38.0 35.0 41.0 31.0 41.0 23 36.56689807856105 38.0 35.0 40.0 31.0 41.0 24 36.4627854288792 38.0 35.0 40.0 31.0 41.0 25 36.36091409263991 38.0 35.0 40.0 30.0 41.0 26 36.220670342953056 38.0 35.0 40.0 30.0 41.0 27 36.09558657748384 38.0 35.0 40.0 30.0 41.0 28 35.99944104163535 38.0 35.0 40.0 30.0 41.0 29 36.03981521494063 38.0 35.0 40.0 30.0 41.0 30 35.950328642467056 38.0 35.0 40.0 30.0 41.0 31 35.78081316699233 38.0 35.0 40.0 29.0 41.0 32 35.49073491282128 38.0 34.0 40.0 27.0 41.0 33 35.087547441004055 38.0 34.0 40.0 25.0 41.0 34 34.705896306177664 38.0 34.0 40.0 23.0 41.0 35 34.41054239315597 38.0 33.0 40.0 21.0 41.0 36 34.2405979132221 38.0 33.0 40.0 21.0 41.0 37 34.134975919384736 38.0 33.0 40.0 20.0 41.0 38 34.0432120221454 38.0 33.0 40.0 19.0 41.0 39 33.982035046846036 38.0 33.0 40.0 18.0 41.0 40 33.89585212184979 37.0 33.0 40.0 18.0 41.0 41 33.80550206047397 37.0 33.0 40.0 18.0 41.0 42 33.73658186782905 37.0 33.0 40.0 18.0 41.0 43 33.614484693621925 37.0 33.0 40.0 18.0 41.0 44 33.48970154441605 37.0 33.0 40.0 17.0 41.0 45 33.46244410416354 37.0 32.0 40.0 18.0 41.0 46 33.45782760909865 37.0 32.0 40.0 18.0 41.0 47 33.4388746931209 37.0 32.0 40.0 18.0 41.0 48 33.32747836189188 36.0 32.0 40.0 18.0 41.0 49 33.276296877348564 36.0 32.0 40.0 18.0 41.0 50 33.17452418082068 36.0 32.0 40.0 17.0 41.0 51 32.95878582343805 36.0 31.0 40.0 16.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 1.0 11 0.0 12 2.0 13 4.0 14 8.0 15 33.0 16 131.0 17 391.0 18 859.0 19 1709.0 20 2826.0 21 4482.0 22 6672.0 23 10208.0 24 15477.0 25 23733.0 26 32556.0 27 33765.0 28 32004.0 29 31705.0 30 34965.0 31 40792.0 32 48929.0 33 61223.0 34 91979.0 35 117276.0 36 95368.0 37 121135.0 38 176143.0 39 292898.0 40 101.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.109809484443105 22.944692870384287 26.24881006062428 18.696687584548325 2 36.99051806202716 23.69224096898642 26.537370359236434 12.779870609749988 3 27.620293476627083 23.86650445914124 34.9888364898041 13.524365574427577 4 23.809512625883062 26.475524825893082 35.29782930006513 14.417133248158725 5 21.22209905305877 30.516230146800943 34.69550077659201 13.566170023548274 6 19.529332005611504 39.24036462247608 31.769580765569415 9.460722606343003 7 83.93135615511798 2.965454181071196 11.665007014379478 1.4381826494313343 8 84.94609261486048 2.0560899844681595 11.348185655593968 1.6496317450774087 9 80.1974516508843 3.8371630592715067 13.19392254120948 2.771462748634701 10 37.73642216543915 22.02522984618468 25.1558664011223 15.08248158725387 11 31.404457262387897 26.498227616614056 25.67748258930808 16.419832531689966 12 25.55520066135578 23.21031552181973 33.402224560348714 17.832259256475773 13 21.170039205371012 28.06354589408287 34.2959316599028 16.47048324064332 14 19.828539130216942 29.409586527381133 34.567347437246355 16.194526905155566 15 19.630476852547723 24.53592364346911 39.57284307831054 16.26075642567263 16 20.710816548925298 22.43153151460494 38.92182098301518 17.93583095345458 17 21.04893155969738 23.704531790169845 33.18279034520767 22.063746304925097 18 22.771995089934364 24.33535623027206 34.39637193747181 18.49627674232176 19 25.25975124004209 26.61659527030412 30.002207650683903 18.121445838969887 20 25.79044854451626 24.753322435993788 30.876186807956312 18.580042211533645 21 23.633918282479083 26.092708803046243 31.793770980510043 18.479601933964627 22 22.981095621023098 24.43783193045744 31.628666892128866 20.9524055563906 23 20.79145059872739 27.641743699584147 31.45260283581342 20.114202865875043 24 20.898623428027456 25.54486697730347 35.40241870835212 18.15409088631695 25 20.664001828748933 26.452195751290148 33.35071271105767 19.53308970890325 26 20.24032078260434 27.99418495415602 32.28274212134877 19.482752141890877 27 20.751681572223056 26.720245252768176 32.818841124304825 19.709232050703942 28 19.913400596222257 26.67718823588356 34.5891108021444 18.820300365749787 29 20.409339145247756 25.313611653890476 34.01613933563806 20.26090986522371 30 21.069207500375768 25.886504834911566 32.98566749336139 20.058620171351272 31 23.47672102810762 25.60225023798787 31.027356079963926 19.893672653940577 32 23.45253081316699 25.130188761962025 30.793830477478835 20.623449947392153 33 23.406890375269302 26.192679367703793 30.008000776592013 20.392429480434892 34 20.623841374818376 27.2478894233178 30.97373052257127 21.15453867929255 35 21.01808707851095 27.77803872939526 30.804320732501626 20.399553459592166 36 24.039437096046896 28.24211508592615 27.732320006012323 19.98612781201463 37 21.20808595119996 30.19839107670725 29.019489954406534 19.574033017686258 38 21.368649481436947 30.451957763415 28.019471165890074 20.15992158925798 39 21.867328022446014 29.13198619670324 28.153026203717623 20.847659577133122 40 22.271985695676136 27.611525502279672 28.20900032566762 21.90748847637657 41 20.32353825341951 26.64039405781853 28.885543489152766 24.1505241996092 42 21.635524700636307 28.063311037627138 27.81459805100456 22.486566210732 43 21.575010020542113 27.850609374217143 28.685054361440955 21.88932624379979 44 21.271732050703942 28.955843854902554 28.596904905055364 21.175519189338143 45 20.541641615311388 29.491081717520917 27.65473909013478 22.312537577032916 46 22.130132396412648 29.17660892329275 27.692629264993236 21.00062941530137 47 21.991332231073702 27.59336326970289 28.742907335036826 21.67239716418658 48 22.191195074903554 26.580349090635803 29.33161418407736 21.896841650383287 49 21.678973144947143 26.358174883511197 29.35666553935568 22.606186432185982 50 20.491460619269503 28.457556741319706 29.0327202014129 22.018262437997898 51 20.0215911368305 28.882646926198706 28.194517510897338 22.90124442607345 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 321.0 1 754.0 2 1187.0 3 10040.0 4 18893.0 5 14535.5 6 10178.0 7 10098.0 8 10018.0 9 10270.0 10 10522.0 11 10819.5 12 11117.0 13 11006.0 14 10895.0 15 10628.5 16 10362.0 17 10132.5 18 9903.0 19 9439.5 20 8976.0 21 8860.0 22 8744.0 23 9119.0 24 9494.0 25 10159.5 26 11972.0 27 13119.0 28 15226.5 29 17334.0 30 19657.0 31 21980.0 32 25377.0 33 28774.0 34 33496.5 35 38219.0 36 42173.5 37 46128.0 38 51658.5 39 57189.0 40 65189.5 41 73190.0 42 81592.0 43 89994.0 44 95980.0 45 101966.0 46 102843.0 47 103720.0 48 98594.5 49 93469.0 50 89326.0 51 85183.0 52 80747.0 53 76311.0 54 70403.5 55 64496.0 56 59785.5 57 55075.0 58 50955.5 59 46836.0 60 43007.5 61 39179.0 62 34768.5 63 30358.0 64 26267.0 65 22176.0 66 18451.5 67 14727.0 68 12255.0 69 9783.0 70 7960.5 71 6138.0 72 5538.5 73 4939.0 74 3765.5 75 2022.0 76 1452.0 77 1093.0 78 734.0 79 628.5 80 523.0 81 365.5 82 208.0 83 143.0 84 78.0 85 58.5 86 39.0 87 26.0 88 13.0 89 10.5 90 8.0 91 4.5 92 1.0 93 2.5 94 4.0 95 4.5 96 5.0 97 2.5 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1277376.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.335646362655574 #Duplication Level Percentage of deduplicated Percentage of total 1 72.69716826326366 24.961042610538893 2 6.844481762710545 4.700194106801495 3 3.4492301461433126 3.552946395641628 4 2.4131818552261413 3.3143263515928756 5 1.8967698116846652 3.2563408742682736 6 1.5532121883829406 3.1998326655889815 7 1.3029477860647813 3.1316288087927737 8 1.113940933132065 3.059830555912732 9 1.0064341803147288 3.1100911292318094 >10 7.662989493541694 45.0651465530578 >50 0.04817802830409245 1.1034375840330044 >100 0.010777618341812732 0.6767308871855237 >500 4.5862192638188135E-4 0.10928473713215248 >1k 0.0 0.0 >5k 2.2931096319094067E-4 0.7591667402220563 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9642 0.7548286487298963 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.022702790720978003 0.0 2 0.0 0.0 0.0 0.06646437697279423 0.0 3 0.0 0.0 0.0 0.1297973345357984 0.0 4 0.0 0.0 0.0 0.22475762813768224 0.0 5 0.0 0.0 0.0 0.4348758705345959 0.0 6 0.0 0.0 0.0 0.9823262688511448 0.0 7 0.0 0.0 0.0 1.3335932411443459 0.0 8 0.0 0.0 0.0 2.015224961170399 0.0 9 0.0 0.0 0.0 2.464896788416253 0.0 10 0.0 0.0 0.0 2.8728424520266547 0.0 11 0.0 0.0 0.0 3.172989002455033 0.0 12 0.0 0.0 0.0 3.4206842777694275 0.0 13 0.0 0.0 0.0 3.5763941079212387 0.0 14 0.0 0.0 0.0 3.6621949997494863 0.0 15 0.0 0.0 0.0 3.7368010671877347 0.0 16 0.0 0.0 0.0 3.8557167192745125 0.0 17 0.0 0.0 0.0 3.9863751941480032 0.0 18 0.0 0.0 0.0 4.147251866325968 0.0 19 0.0 0.0 0.0 4.259748108622676 0.0 20 0.0 0.0 0.0 4.3734969186833 0.0 21 0.0 0.0 0.0 4.517463926048399 0.0 22 0.0 0.0 0.0 4.671060048098602 0.0 23 0.0 0.0 0.0 4.849472668971392 0.0 24 0.0 0.0 0.0 4.993909389247959 0.0 25 0.0 0.0 0.0 5.124802720577184 0.0 26 0.0 0.0 0.0 5.24880692920487 0.0 27 0.0 0.0 0.0 5.377508266947242 0.0 28 0.0 0.0 0.0 5.525467834059823 0.0 29 0.0 0.0 0.0 5.674366826995341 0.0 30 0.0 0.0 0.0 5.851761736559948 0.0 31 0.0 0.0 0.0 6.019057818527982 0.0 32 0.0 0.0 0.0 6.191207600581191 0.0 33 0.0 0.0 0.0 6.358816824490205 0.0 34 0.0 0.0 0.0 6.539499724435092 0.0 35 0.0 0.0 0.0 6.733256300415852 0.0 36 0.0 0.0 0.0 6.914330627786963 0.0 37 0.0 0.0 0.0 7.108948344105416 0.0 38 0.0 0.0 0.0 7.3215717220301615 0.0 39 0.0 0.0 0.0 7.575999549075605 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTACGCG 20 7.0335815E-4 45.0 1 CGTTTTT 10835 0.0 43.35948 1 GTTAGCG 55 6.184564E-11 40.909092 1 CTACGGG 190 0.0 39.078945 3 CGGTTTT 290 0.0 38.793106 1 TACGGGT 170 0.0 38.382355 4 ACGGGTA 235 0.0 38.29787 5 TAGGGAC 925 0.0 38.18919 5 TACGGGA 325 0.0 38.076923 4 TAGGGCG 595 0.0 37.815125 5 CGGGTAT 305 0.0 37.62295 6 GACACGA 240 0.0 37.500004 25 TATCGCG 30 1.13999304E-4 37.500004 1 ACACGAC 235 0.0 37.340427 26 CACGGGA 200 0.0 37.124996 4 AGGGCGA 1475 0.0 37.067795 6 GGGCGAT 2800 0.0 36.964287 7 GTTTTTT 13355 0.0 36.508797 2 GGACCGA 710 0.0 36.443665 8 CGTAAGG 210 0.0 36.42857 2 >>END_MODULE