##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545361_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 5303891 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.14864294911038 31.0 31.0 33.0 30.0 34.0 2 31.501446579501728 31.0 31.0 34.0 30.0 34.0 3 31.67519675649443 31.0 31.0 34.0 30.0 34.0 4 35.459349560539614 37.0 35.0 37.0 33.0 37.0 5 35.35815818990247 37.0 35.0 37.0 33.0 37.0 6 35.40686356488095 37.0 35.0 37.0 33.0 37.0 7 35.85174355958672 37.0 35.0 37.0 35.0 37.0 8 35.90993404653301 37.0 35.0 37.0 35.0 37.0 9 37.7932218064059 39.0 37.0 39.0 35.0 39.0 10 37.04140337725643 39.0 37.0 39.0 33.0 39.0 11 36.68484099692094 39.0 35.0 39.0 32.0 39.0 12 35.92351671631261 37.0 35.0 39.0 31.0 39.0 13 35.59528391514833 37.0 35.0 39.0 30.0 39.0 14 36.56362131122227 38.0 35.0 41.0 31.0 41.0 15 36.83700852826727 38.0 35.0 41.0 31.0 41.0 16 36.93502374011834 38.0 35.0 41.0 32.0 41.0 17 36.88691264582926 38.0 35.0 41.0 32.0 41.0 18 36.81935601617756 38.0 35.0 41.0 31.0 41.0 19 36.79243898488864 38.0 35.0 40.0 31.0 41.0 20 36.6675327603829 38.0 35.0 40.0 31.0 41.0 21 36.55326023856825 38.0 35.0 40.0 31.0 41.0 22 36.45178266295442 38.0 35.0 40.0 31.0 41.0 23 36.36438380803829 38.0 35.0 40.0 31.0 41.0 24 36.271468059958245 38.0 35.0 40.0 31.0 41.0 25 36.167183865580945 38.0 35.0 40.0 30.0 41.0 26 36.00732556532553 38.0 35.0 40.0 30.0 41.0 27 35.87033971851986 37.0 34.0 40.0 30.0 41.0 28 35.814218655700124 37.0 34.0 40.0 30.0 41.0 29 35.951600061162644 37.0 35.0 40.0 30.0 41.0 30 35.93063337840088 37.0 35.0 40.0 30.0 41.0 31 35.833885726535485 38.0 34.0 40.0 30.0 41.0 32 35.712253136423804 37.0 34.0 40.0 29.0 41.0 33 35.539187928258706 37.0 34.0 40.0 29.0 41.0 34 35.41403528089096 37.0 34.0 40.0 28.0 41.0 35 35.298282902118466 37.0 34.0 40.0 27.0 41.0 36 35.15705941166589 37.0 34.0 40.0 27.0 41.0 37 35.048629770106515 37.0 34.0 40.0 27.0 41.0 38 35.00864817923294 37.0 34.0 40.0 27.0 41.0 39 34.97125544246667 37.0 34.0 40.0 27.0 41.0 40 34.84827817917073 37.0 34.0 40.0 26.0 41.0 41 34.797433431418554 36.0 34.0 40.0 26.0 41.0 42 34.74855252492934 36.0 33.0 40.0 26.0 41.0 43 34.62124956941989 36.0 33.0 40.0 26.0 41.0 44 34.5053537110774 36.0 33.0 40.0 25.0 41.0 45 34.45625730242194 36.0 33.0 40.0 24.0 41.0 46 34.46145216785187 36.0 33.0 40.0 25.0 41.0 47 34.434718586788456 36.0 33.0 40.0 25.0 41.0 48 34.36902681446508 36.0 33.0 40.0 24.0 41.0 49 34.353675443179355 36.0 33.0 40.0 24.0 41.0 50 34.22221761344643 35.0 33.0 40.0 24.0 41.0 51 33.96418365309543 35.0 33.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 4.0 10 10.0 11 5.0 12 9.0 13 17.0 14 51.0 15 155.0 16 432.0 17 1038.0 18 2457.0 19 4949.0 20 8596.0 21 13621.0 22 20543.0 23 30258.0 24 43190.0 25 60470.0 26 78663.0 27 93407.0 28 106739.0 29 124420.0 30 149028.0 31 182523.0 32 225632.0 33 291040.0 34 487670.0 35 700047.0 36 386520.0 37 475756.0 38 680523.0 39 1135557.0 40 561.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.13906884587183 23.737195956704237 29.33891363906234 12.784821558361587 2 30.208727894294963 25.441322229284125 30.772351845088824 13.57759803133209 3 29.10042834590681 25.521697184199297 31.195456316881327 14.182418153012572 4 25.599470275690056 28.338365173794106 30.700762892751754 15.361401657764084 5 23.71457105736147 32.53300265786005 29.628945994553806 14.123480290224666 6 20.86471988206394 41.91453029483449 26.66263314988939 10.558116673212176 7 89.29825292412683 3.863352395439499 5.23870117240343 1.5996935080302366 8 90.70135491095122 2.7740577624992673 4.717706302787897 1.806881023761612 9 86.10899055052225 4.512592736162942 6.62066773242512 2.7577489808896902 10 48.59847232908821 21.737343395631623 15.81576619881517 13.848418076464993 11 42.36883827363722 23.773942564053446 18.22993722910218 15.627281933207149 12 35.43157278307567 23.424180474297078 25.22246403630844 15.921782706318814 13 22.194064697030917 36.78942497121453 25.168937295280013 15.847573036474543 14 18.248602771059964 38.52303902927115 27.46110355586116 15.767254643807727 15 17.549625359948006 24.57791836219862 42.23853770750568 15.633918570347694 16 18.16570136905151 20.837984792673907 40.889188710703145 20.107125127571436 17 19.187479531536376 22.077829276657457 27.393078025170574 31.34161316663559 18 23.24687667978094 24.386115778020326 31.595294850516346 20.77171269168239 19 28.78909087686757 26.391549147597495 23.66059181834619 21.15876815718875 20 30.334239523398953 24.657237488477797 24.50746065482869 20.501062333294556 21 23.958938824346127 28.20127713785973 26.64785154898545 21.19193248880869 22 24.27570626922763 25.807543933312356 24.48698512092349 25.429764676536525 23 21.32685230522271 30.331826200802393 25.057585082348034 23.283736411626858 24 21.53705647419979 25.534574522741888 34.38228651380656 18.54608248925176 25 19.67985390348331 26.828813035562003 31.78142235577617 21.70991070517852 26 19.27848818914265 32.57866724636686 26.443096209933426 21.699748354557062 27 20.511186975750444 30.821711833821624 28.183554300041237 20.4835468903867 28 18.12429780325425 28.525680486269422 34.351497796617615 18.998523913858712 29 19.034384379316997 25.62464047620888 33.03267355984503 22.308301584629096 30 21.057804543871658 29.723009013571357 28.594648721099286 20.6245377214577 31 27.044051244642848 27.376750389478214 24.614419866471614 20.964778499407323 32 28.06498097340236 27.20133200324064 25.150102066577162 19.58358495677984 33 26.51347850097221 27.77602330062967 24.549712654351303 21.160785544046814 34 20.305187267234565 27.738220864644465 28.241775707683285 23.714816160437685 35 21.348666479005697 26.439777891363153 29.522967195215738 22.688588434415415 36 28.066772111266992 26.292734899717964 25.208794826288848 20.431698162726196 37 21.356981129514164 30.704514855226094 27.98503966239125 19.953464352868487 38 21.125716950065527 31.541881233984636 24.711763495893862 22.620638320055974 39 21.242216327597983 30.805289927715336 26.129533959125478 21.822959785561206 40 23.515773608469708 26.44980826340511 25.53070943577083 24.503708692354348 41 18.99714756581536 25.325859826304875 26.889674014794046 28.787318593085722 42 22.1267367674034 27.233987274625367 24.849417154311805 25.789858803659428 43 22.407323227419266 27.156459286210822 26.239679510759178 24.196537975610735 44 21.248871818821314 29.82642365765058 26.747495376507548 22.177209147020555 45 19.423193274522422 32.8827836016992 23.811386772465724 23.88263635131265 46 22.192763765318706 30.770221333734042 25.77298439956628 21.26403050138097 47 22.212353157332984 26.93897744127849 27.601000850130593 23.247668551257934 48 23.153303866915817 24.912389790815837 29.11639775402624 22.8179085882421 49 21.450289985220284 24.682935603314622 29.63991907073505 24.22685534073004 50 19.96275941568181 30.776707138212306 26.348354443935595 22.912179002170294 51 19.286689715154402 31.56620300077811 24.780901417468797 24.36620586659869 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1264.0 1 2633.0 2 4002.0 3 12473.5 4 20945.0 5 16267.0 6 11589.0 7 12202.0 8 12815.0 9 13896.5 10 14978.0 11 15157.5 12 15337.0 13 15697.0 14 16057.0 15 15423.5 16 14790.0 17 14306.0 18 13822.0 19 14505.5 20 15189.0 21 15453.0 22 15717.0 23 17465.5 24 19214.0 25 22773.0 26 30104.0 27 33876.0 28 44070.0 29 54264.0 30 65450.0 31 76636.0 32 92881.5 33 109127.0 34 126361.5 35 143596.0 36 156341.0 37 169086.0 38 201316.5 39 233547.0 40 299551.5 41 365556.0 42 420899.0 43 476242.0 44 479768.0 45 483294.0 46 476437.0 47 469580.0 48 459141.5 49 448703.0 50 435818.5 51 422934.0 52 386698.0 53 350462.0 54 319654.0 55 288846.0 56 258602.5 57 228359.0 58 214249.0 59 200139.0 60 182567.0 61 164995.0 62 142529.5 63 120064.0 64 103968.0 65 87872.0 66 72037.5 67 56203.0 68 48653.0 69 41103.0 70 34697.5 71 28292.0 72 24696.5 73 21101.0 74 17069.0 75 9914.0 76 6791.0 77 5585.5 78 4380.0 79 3137.5 80 1895.0 81 1459.5 82 1024.0 83 749.0 84 474.0 85 335.5 86 197.0 87 140.0 88 83.0 89 71.0 90 59.0 91 36.0 92 13.0 93 11.0 94 9.0 95 5.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 5303891.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.047423826027934 #Duplication Level Percentage of deduplicated Percentage of total 1 78.01661960043525 13.299823798026178 2 9.637047691436754 3.2857367285513277 3 3.3905703521850588 1.7340146941699046 4 1.565548780112284 1.0675429429958048 5 0.873584433742232 0.7446182044912222 6 0.5428212879131623 0.5552222734107607 7 0.38401439196051196 0.4582519266531682 8 0.2953359809553646 0.4027774110737451 9 0.24009737080127386 0.3683737475607869 >10 2.32388298197347 9.187615524180014 >50 0.9668019351470489 12.090962762047571 >100 1.7448227921200024 54.09551926561703 >500 0.016732900488906462 1.7700319460786669 >1k 0.0017848427188165697 0.42611070206154567 >5k 1.115526699260356E-4 0.10044703567140109 >10k+ 2.231053398520712E-4 0.4129510374109191 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 11132 0.20988364956972155 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 10583 0.1995327581204063 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.06069129248696853 0.0 2 0.0 0.0 0.0 0.20192722663418233 0.0 3 0.0 0.0 0.0 0.29923314789085975 0.0 4 0.0 0.0 0.0 0.4722382115318735 0.0 5 0.0 0.0 0.0 0.8001295652569029 0.0 6 0.0 0.0 0.0 1.1941044791455933 0.0 7 0.0 0.0 0.0 1.4180532744734007 0.0 8 0.0 0.0 0.0 1.9822805559164018 0.0 9 0.0 0.0 0.0 2.207228617631848 0.0 10 0.0 0.0 0.0 2.57331834308058 0.0 11 0.0 0.0 0.0 2.9732700012123177 0.0 12 0.0 0.0 0.0 3.287888080656258 0.0 13 1.885408278563794E-5 0.0 0.0 3.4271066279454083 0.0 14 1.885408278563794E-5 0.0 0.0 3.481406386368046 0.0 15 1.885408278563794E-5 0.0 0.0 3.567984334519695 0.0 16 1.885408278563794E-5 0.0 0.0 3.7698738529883062 0.0 17 1.885408278563794E-5 0.0 0.0 4.011979130038683 0.0 18 1.885408278563794E-5 0.0 0.0 4.3140403903473885 0.0 19 1.885408278563794E-5 0.0 0.0 4.466060859847987 0.0 20 1.885408278563794E-5 0.0 0.0 4.626339417608695 0.0 21 1.885408278563794E-5 0.0 0.0 4.850363629267645 0.0 22 1.885408278563794E-5 0.0 0.0 5.08340009249813 0.0 23 1.885408278563794E-5 0.0 0.0 5.3639111361828515 0.0 24 1.885408278563794E-5 0.0 0.0 5.5749448848024965 0.0 25 1.885408278563794E-5 0.0 0.0 5.757150740842902 0.0 26 1.885408278563794E-5 0.0 0.0 5.928854872771707 0.0 27 3.770816557127588E-5 0.0 0.0 6.0932624746624695 0.0 28 3.770816557127588E-5 0.0 0.0 6.272300844794888 0.0 29 3.770816557127588E-5 0.0 0.0 6.463613222820755 0.0 30 3.770816557127588E-5 0.0 0.0 6.695424170670174 0.0 31 3.770816557127588E-5 0.0 0.0 6.914810277963857 0.0 32 3.770816557127588E-5 0.0 0.0 7.118622912876603 0.0 33 3.770816557127588E-5 0.0 0.0 7.322341277375421 0.0 34 3.770816557127588E-5 0.0 0.0 7.541519989758462 0.0 35 3.770816557127588E-5 0.0 0.0 7.797803537063639 0.0 36 3.770816557127588E-5 0.0 0.0 8.020375984348094 0.0 37 3.770816557127588E-5 0.0 0.0 8.246907789017534 0.0 38 3.770816557127588E-5 0.0 0.0 8.477097285747389 0.0 39 3.770816557127588E-5 0.0 0.0 8.706853138573171 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTATACG 140 0.0 41.785713 1 TAATGCG 130 0.0 39.80769 1 CGTTTTT 11795 0.0 39.02925 1 CTATGCG 255 0.0 38.82353 1 GCGATAT 630 0.0 38.57143 9 CATACGA 750 0.0 38.399998 18 AGGGCGA 6245 0.0 38.33467 6 GGGCGAT 12475 0.0 38.092186 7 TGGGCGA 3805 0.0 37.90407 6 GGCGATA 3180 0.0 37.5 8 CGAACTA 60 1.5643309E-10 37.499996 22 GACCGAT 3140 0.0 37.476112 9 TAAGGGC 2905 0.0 37.409637 4 GCTACGA 855 0.0 37.105263 10 CACGACC 445 0.0 36.91011 27 AGCTACG 850 0.0 36.794117 9 CGGTCTA 240 0.0 36.5625 31 ATAGGGC 2660 0.0 36.37218 4 ATGGGCG 2075 0.0 36.325302 5 GGCGATT 3745 0.0 36.288383 8 >>END_MODULE