##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545360_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 5104824 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.138467065661814 31.0 31.0 33.0 30.0 33.0 2 31.491475122354856 31.0 31.0 34.0 30.0 34.0 3 31.68536701755046 31.0 31.0 34.0 30.0 34.0 4 35.47603247438109 37.0 35.0 37.0 33.0 37.0 5 35.37605390509056 37.0 35.0 37.0 33.0 37.0 6 35.429520586801814 37.0 35.0 37.0 33.0 37.0 7 35.818296967730916 37.0 35.0 37.0 35.0 37.0 8 35.86195077440476 37.0 35.0 37.0 35.0 37.0 9 37.763996760711045 39.0 37.0 39.0 35.0 39.0 10 37.05884081410054 39.0 37.0 39.0 33.0 39.0 11 36.69872830091693 39.0 35.0 39.0 32.0 39.0 12 35.90187340445038 37.0 35.0 39.0 31.0 39.0 13 35.53914121231212 37.0 35.0 39.0 30.0 39.0 14 36.45000513240026 38.0 35.0 41.0 31.0 41.0 15 36.71983657027157 38.0 35.0 41.0 31.0 41.0 16 36.816403072858144 38.0 35.0 41.0 32.0 41.0 17 36.7271535708185 38.0 35.0 41.0 31.0 41.0 18 36.67293563891723 38.0 35.0 40.0 31.0 41.0 19 36.65483178264324 38.0 35.0 40.0 31.0 41.0 20 36.554781712356785 38.0 35.0 40.0 31.0 41.0 21 36.443344961550096 38.0 35.0 40.0 31.0 41.0 22 36.32779641374512 38.0 35.0 40.0 30.0 41.0 23 36.25954489322257 38.0 35.0 40.0 30.0 41.0 24 36.18095099850651 38.0 35.0 40.0 30.0 41.0 25 36.05292758379133 37.0 34.0 40.0 30.0 41.0 26 35.89841256035468 37.0 34.0 40.0 30.0 41.0 27 35.76492588187173 37.0 34.0 40.0 30.0 41.0 28 35.692869333007366 37.0 34.0 40.0 29.0 41.0 29 35.82035051551239 37.0 34.0 40.0 30.0 41.0 30 35.789438578097894 37.0 34.0 40.0 30.0 41.0 31 35.66908340032879 37.0 34.0 40.0 29.0 41.0 32 35.56154903675426 37.0 34.0 40.0 29.0 41.0 33 35.39719900235542 37.0 34.0 40.0 29.0 41.0 34 35.23322919654037 37.0 34.0 40.0 27.0 41.0 35 35.13770425777657 37.0 34.0 40.0 27.0 41.0 36 34.99278251316794 37.0 34.0 40.0 26.0 41.0 37 34.906915302075056 37.0 34.0 40.0 26.0 41.0 38 34.85507139913149 36.0 33.0 40.0 27.0 41.0 39 34.80472235673551 36.0 33.0 40.0 26.0 41.0 40 34.689782644808126 36.0 33.0 40.0 26.0 41.0 41 34.644760328661675 36.0 33.0 40.0 26.0 41.0 42 34.584604875701885 36.0 33.0 40.0 26.0 41.0 43 34.45966716972025 36.0 33.0 40.0 26.0 41.0 44 34.34329724198131 35.0 33.0 40.0 25.0 41.0 45 34.29550009951372 35.0 33.0 40.0 24.0 41.0 46 34.29311510054019 35.0 33.0 40.0 24.0 41.0 47 34.254621119161015 35.0 33.0 40.0 25.0 41.0 48 34.19236099031034 35.0 33.0 40.0 24.0 41.0 49 34.16711761267381 35.0 33.0 40.0 24.0 41.0 50 34.044331205150264 35.0 33.0 39.0 24.0 41.0 51 33.81487961191218 35.0 33.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 1.0 11 14.0 12 24.0 13 22.0 14 62.0 15 208.0 16 425.0 17 1104.0 18 2633.0 19 4896.0 20 8570.0 21 13662.0 22 20387.0 23 29613.0 24 42278.0 25 58167.0 26 76093.0 27 92647.0 28 106942.0 29 124047.0 30 148754.0 31 181478.0 32 224357.0 33 289121.0 34 488573.0 35 677350.0 36 379413.0 37 470947.0 38 659846.0 39 1002669.0 40 519.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.36155683330121 24.059673751729736 28.953103965974147 12.62566544899491 2 29.342578705945595 25.594535678409287 31.01121605759572 14.051669558049406 3 29.2839478892906 25.427575955605914 30.933759910233928 14.354716244869559 4 26.060780939754242 27.838354466285224 30.636315767203726 15.464548826756808 5 23.370913473216707 32.64619896787823 28.84826195770902 15.134625601196044 6 21.392569068003127 41.82416475083176 25.671169074585137 11.112097106579972 7 89.60882882544041 3.750726763547578 4.9664591766532995 1.6739852343587165 8 90.87500372196965 2.7468136021927494 4.608268571061411 1.7699141047761884 9 86.82892887198462 3.832139952327446 6.456716235466688 2.8822149402212496 10 50.54340756899748 20.962995002374225 13.728622181685402 14.76497524694289 11 42.655731128046725 22.20411516636029 18.285037838718825 16.855115866874158 12 38.10004027562948 20.7349166200441 24.264009885551392 16.901033218775023 13 24.40936259506694 33.16817582741344 24.578575088974663 17.843886488544953 14 19.534032906913147 34.771012673502554 27.858982013875504 17.835972405708798 15 19.366779344400513 21.81610962493516 41.339897320652 17.477213710012336 16 21.14376519151297 18.821785040973012 39.17004778225459 20.864401985259434 17 21.545914217610637 18.698294005826646 27.266777463826376 32.489014312736344 18 25.15044593114278 22.13888275090385 31.033371571674166 21.677299746279203 19 29.488342791054105 25.177146166057828 23.551448590588038 21.78306245230002 20 31.86742579176089 23.4762452143306 23.159779847454097 21.496549146454413 21 25.39864253890046 26.594452619718133 26.016861697876358 21.990043143505044 22 24.94230947041465 23.91430145290024 25.187293430684388 25.956095646000726 23 23.110708616007134 28.363622330564187 24.157757446681806 24.367911606746873 24 24.411458651659686 23.57609194753825 32.09540622752126 19.917043173280803 25 21.79103530307803 24.043257906638896 30.317656397164722 23.848050393118353 26 20.91964385060092 29.464678899801445 25.323125733619804 24.292551515977827 27 21.07118678332495 28.32181873459301 27.28871749545136 23.318276986630686 28 18.05619547314462 27.084107111234395 32.77840724773273 22.081290167888255 29 20.4452886132803 24.81762348711728 31.53701283335136 23.20007506625106 30 22.86735056879532 26.75373333145276 29.28831630630165 21.090599793450274 31 29.30298870245086 25.326593042189117 23.769340529663708 21.60107772569632 32 29.877562869944196 25.49057518927195 23.805972546751857 20.825889394032 33 28.211687611561143 25.158222888781278 24.090037188353605 22.540052311303974 34 21.275757988914016 26.619899138540333 28.104201045912653 24.000141826633005 35 22.430391331806934 25.929297464515916 28.741402250106958 22.898908953570192 36 28.983212741516652 26.388000839989783 24.517005875227042 20.111780543266526 37 23.624438374369028 29.836386132019438 25.961325992825614 20.577849500785923 38 22.980459267547715 30.69694469388171 23.224346226236204 23.098249812334373 39 22.917655927021187 29.013752481966076 24.867380344552526 23.20121124646021 40 24.37006643128147 24.97488649951497 25.013399090742404 25.641647978461158 41 19.854768744230945 24.53847576331721 25.99883952904155 29.607915963410296 42 22.961790651352523 26.250875642333604 23.761955358304224 27.02537834800965 43 22.9934665720111 25.04711230005187 25.705567909882888 26.25385321805414 44 21.83142846844475 27.83845241285498 26.384964496327395 23.945154622372876 45 20.91184730364847 30.7000593947999 23.17449142223121 25.213601879320425 46 23.75272879143336 28.681635253242817 25.368122387764984 22.197513567558843 47 22.78877783053833 26.254695558554026 26.614277005436428 24.342249605471217 48 24.104454923421454 23.72397167855346 28.240013759534122 23.931559638490967 49 22.460167089012277 22.948234846098515 29.606662247317438 24.98493581757177 50 20.972476230326453 28.50415606884782 26.734300732013484 23.789066968812243 51 20.29691914941632 28.78590917140336 25.491809316050855 25.425362363129462 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1036.0 1 2699.0 2 4362.0 3 13124.0 4 21886.0 5 16436.5 6 10987.0 7 11354.0 8 11721.0 9 12444.0 10 13167.0 11 13250.5 12 13334.0 13 12868.5 14 12403.0 15 11821.5 16 11240.0 17 10774.5 18 10309.0 19 10804.0 20 11299.0 21 11438.5 22 11578.0 23 12088.5 24 12599.0 25 16037.5 26 21265.0 27 23054.0 28 27925.0 29 32796.0 30 40625.5 31 48455.0 32 57408.0 33 66361.0 34 81152.5 35 95944.0 36 105783.5 37 115623.0 38 139863.0 39 164103.0 40 220313.0 41 276523.0 42 336964.0 43 397405.0 44 402660.5 45 407916.0 46 414360.5 47 420805.0 48 422734.5 49 424664.0 50 418583.5 51 412503.0 52 390523.0 53 368543.0 54 349383.5 55 330224.0 56 311924.5 57 293625.0 58 277171.0 59 260717.0 60 248728.5 61 236740.0 62 210702.0 63 184664.0 64 161006.0 65 137348.0 66 111845.5 67 86343.0 68 70307.0 69 54271.0 70 46657.5 71 39044.0 72 32816.5 73 26589.0 74 21108.0 75 12864.5 76 10102.0 77 7956.5 78 5811.0 79 3978.5 80 2146.0 81 1510.0 82 874.0 83 574.0 84 274.0 85 216.0 86 158.0 87 111.5 88 65.0 89 56.0 90 47.0 91 41.5 92 36.0 93 30.5 94 25.0 95 13.0 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 5104824.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.375016618085645 #Duplication Level Percentage of deduplicated Percentage of total 1 78.95094181874552 12.92822984295471 2 9.029430664351924 2.957141543612298 3 3.015488262582216 1.4813601123427804 4 1.403355461874815 0.9191987603712544 5 0.8027911244518335 0.6572859001875219 6 0.49538280714441785 0.4867141019582256 7 0.3716146408446105 0.4259637143548098 8 0.2710238062512651 0.3550415465009033 9 0.21452479092774038 0.31615623147897876 >10 2.3535319733794986 9.165364295239533 >50 1.16980912087427 14.175334182432367 >100 1.9078448449030334 53.6189325776226 >500 0.01136020563455041 1.2491877583600117 >1k 0.002537918280059127 0.7298060319186416 >5k 1.2085325143138698E-4 0.10739891900923228 >10k+ 2.4170650286277397E-4 0.4268844816561912 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 11386 0.2230439286447486 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 10185 0.19951716258973864 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 5427 0.10631120681143953 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.041901542540937746 0.0 2 0.0 0.0 0.0 0.1696238695006919 0.0 3 0.0 0.0 0.0 0.2565612448147086 0.0 4 0.0 0.0 0.0 0.4213661430834834 0.0 5 0.0 0.0 0.0 0.7587724865734842 0.0 6 0.0 0.0 0.0 1.1360822625814329 0.0 7 1.958931395088254E-5 0.0 0.0 1.3432980255538682 0.0 8 1.958931395088254E-5 0.0 0.0 1.8565576403809416 0.0 9 1.958931395088254E-5 0.0 0.0 2.0630485987371943 0.0 10 1.958931395088254E-5 0.0 0.0 2.404372805017372 0.0 11 1.958931395088254E-5 0.0 0.0 2.7478322465181955 0.0 12 1.958931395088254E-5 0.0 0.0 3.0331310148988484 0.0 13 1.958931395088254E-5 0.0 0.0 3.153644474324678 0.0 14 1.958931395088254E-5 0.0 0.0 3.2009526675160593 0.0 15 1.958931395088254E-5 0.0 0.0 3.2789377263545227 0.0 16 1.958931395088254E-5 0.0 0.0 3.4521072616803243 0.0 17 1.958931395088254E-5 0.0 0.0 3.6480787584449534 0.0 18 1.958931395088254E-5 0.0 0.0 3.899292120551071 0.0 19 1.958931395088254E-5 0.0 0.0 4.030305452254574 0.0 20 1.958931395088254E-5 0.0 0.0 4.167959561387425 0.0 21 1.958931395088254E-5 0.0 0.0 4.357780013571476 0.0 22 1.958931395088254E-5 0.0 0.0 4.553908224847713 0.0 23 1.958931395088254E-5 0.0 0.0 4.783299091212547 0.0 24 1.958931395088254E-5 0.0 0.0 4.95893688009616 0.0 25 1.958931395088254E-5 0.0 0.0 5.107404290529899 0.0 26 1.958931395088254E-5 0.0 0.0 5.255068539091651 0.0 27 1.958931395088254E-5 0.0 0.0 5.39687558278209 0.0 28 1.958931395088254E-5 0.0 0.0 5.55157239505221 0.0 29 1.958931395088254E-5 0.0 0.0 5.719041440018304 0.0 30 1.958931395088254E-5 0.0 0.0 5.920830963026345 0.0 31 1.958931395088254E-5 0.0 0.0 6.096429573282056 0.0 32 1.958931395088254E-5 0.0 0.0 6.266445229061766 0.0 33 1.958931395088254E-5 0.0 0.0 6.447254596828412 0.0 34 1.958931395088254E-5 0.0 0.0 6.641698127104871 0.0 35 1.958931395088254E-5 0.0 0.0 6.861039675412903 0.0 36 1.958931395088254E-5 0.0 0.0 7.045061690667494 0.0 37 1.958931395088254E-5 0.0 0.0 7.239975364478775 0.0 38 1.958931395088254E-5 0.0 0.0 7.456202211868617 0.0 39 1.958931395088254E-5 0.0 0.0 7.715486371322498 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 9690 0.0 40.23994 1 TAAACGG 255 0.0 39.705883 2 AAGCGTA 40 3.4613367E-7 39.375 17 TGCGATT 40 3.4613367E-7 39.375 16 TTGCGTC 440 0.0 39.375 16 GCGTACC 40 3.4613367E-7 39.375 9 CGTAAGG 710 0.0 38.978874 2 TCGTTGA 965 0.0 38.704662 24 CGTAAAT 70 0.0 38.57143 16 CGTTGAT 960 0.0 38.437504 25 ACTACGG 190 0.0 37.894737 2 AGGGCGA 5275 0.0 37.535545 6 GTACGAT 30 1.1404723E-4 37.500004 11 TACGTAG 270 0.0 37.5 1 GCGATAT 565 0.0 37.0354 9 ATTATAC 3435 0.0 36.94323 42 GGGCGAT 10515 0.0 36.847363 7 ATGATCG 1380 0.0 36.684784 27 ATTAGCG 485 0.0 36.649487 1 TATACTA 3405 0.0 36.60793 44 >>END_MODULE