##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545359_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1878334 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.161062941947492 31.0 31.0 33.0 30.0 34.0 2 31.517595379735447 31.0 31.0 34.0 30.0 34.0 3 31.702400638012197 31.0 31.0 34.0 30.0 34.0 4 35.49010080209377 37.0 35.0 37.0 33.0 37.0 5 35.396841562789156 37.0 35.0 37.0 33.0 37.0 6 35.45345396505627 37.0 35.0 37.0 33.0 37.0 7 35.80309359251336 37.0 35.0 37.0 35.0 37.0 8 35.83810653483353 37.0 35.0 37.0 35.0 37.0 9 37.70991953507736 39.0 37.0 39.0 35.0 39.0 10 37.073617897562414 39.0 37.0 39.0 33.0 39.0 11 36.69618608831017 39.0 35.0 39.0 32.0 39.0 12 35.87202116343526 37.0 35.0 39.0 31.0 39.0 13 35.49065235469304 37.0 35.0 39.0 30.0 39.0 14 36.43492744101954 38.0 35.0 41.0 31.0 41.0 15 36.72513088726499 38.0 35.0 41.0 31.0 41.0 16 36.82718302495722 38.0 35.0 41.0 32.0 41.0 17 36.75491313046562 38.0 35.0 41.0 32.0 41.0 18 36.70749664330199 38.0 35.0 40.0 31.0 41.0 19 36.66591032265827 38.0 35.0 40.0 31.0 41.0 20 36.536500963087505 38.0 35.0 40.0 31.0 41.0 21 36.39277146662947 38.0 35.0 40.0 31.0 41.0 22 36.259736021389166 38.0 35.0 40.0 30.0 41.0 23 36.181725933726376 38.0 35.0 40.0 30.0 41.0 24 36.07649544756151 37.0 35.0 40.0 30.0 41.0 25 35.94638706428143 37.0 34.0 40.0 30.0 41.0 26 35.76308846030578 37.0 34.0 40.0 30.0 41.0 27 35.615186117059054 37.0 34.0 40.0 29.0 41.0 28 35.535720484216334 37.0 34.0 40.0 29.0 41.0 29 35.67920827712217 37.0 34.0 40.0 30.0 41.0 30 35.65560384894273 37.0 34.0 40.0 29.0 41.0 31 35.53851924098696 37.0 34.0 40.0 29.0 41.0 32 35.392825770070715 37.0 34.0 40.0 29.0 41.0 33 35.23974969307908 37.0 34.0 40.0 28.0 41.0 34 35.08498541792887 36.0 34.0 40.0 27.0 41.0 35 34.96824100506087 36.0 34.0 40.0 27.0 41.0 36 34.79958782623325 36.0 33.0 40.0 26.0 41.0 37 34.69938679702332 36.0 33.0 40.0 26.0 41.0 38 34.620776177186805 36.0 33.0 40.0 26.0 41.0 39 34.55645481581018 36.0 33.0 40.0 25.0 41.0 40 34.400176965332044 36.0 33.0 40.0 24.0 41.0 41 34.325429875623826 35.0 33.0 40.0 24.0 41.0 42 34.262141876790814 35.0 33.0 40.0 24.0 41.0 43 34.13336552498118 35.0 33.0 40.0 24.0 41.0 44 34.02107612384166 35.0 33.0 40.0 23.0 41.0 45 33.95877250797781 35.0 33.0 40.0 23.0 41.0 46 33.98352955331693 35.0 33.0 39.0 24.0 41.0 47 33.93400215297173 35.0 33.0 39.0 23.0 41.0 48 33.85618053019324 35.0 33.0 39.0 23.0 41.0 49 33.81624141393384 35.0 33.0 39.0 24.0 41.0 50 33.68490268503898 35.0 33.0 39.0 24.0 41.0 51 33.429152642714236 35.0 32.0 39.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 4.0 10 2.0 11 5.0 12 4.0 13 8.0 14 15.0 15 99.0 16 240.0 17 524.0 18 1099.0 19 2072.0 20 3629.0 21 5692.0 22 8408.0 23 12037.0 24 16536.0 25 22287.0 26 29185.0 27 35399.0 28 40305.0 29 46844.0 30 55879.0 31 67411.0 32 83408.0 33 107619.0 34 185301.0 35 259145.0 36 142041.0 37 174434.0 38 236342.0 39 342156.0 40 204.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.05255188906765 23.58270680294346 28.20680454061951 13.157936767369382 2 31.427690708894158 25.738287226872323 29.547034765914905 13.286987298318618 3 30.19675946876328 25.731632393386906 29.885206784309926 14.186401353539893 4 27.07963546419327 27.734311363154795 29.283822791899627 15.902230380752306 5 24.327089857288428 32.33567618964465 28.20951971268156 15.127714240385362 6 23.168190534803713 41.153490273827764 24.969094953293716 10.709224238074805 7 88.42468911279889 4.235881371470676 5.410326384977326 1.9291031307531035 8 89.3361351069618 3.0631399953362926 5.27983840999524 2.3208864877066593 9 84.69212610749739 4.637620359318417 7.302748073558803 3.3675054596253915 10 53.13554458365765 20.40797855972367 12.802994568591103 13.653482288027583 11 44.040090846462874 21.72936229658836 18.256923422564892 15.973623434383875 12 37.785079756848354 21.158164628867922 24.27752465748903 16.77923095679469 13 23.003896005715703 34.32989021121909 25.36785257573999 17.298361207325215 14 18.515876303149494 36.29008472401607 27.52167612362871 17.672362849205733 15 18.133569429079174 21.84877662865071 42.552336272462725 17.465317669807394 16 20.28505047558102 18.10428816174333 40.58660493820588 21.02405642446977 17 20.40941600375652 18.514758291123943 27.320859868372715 33.75496583674682 18 24.839299080994117 22.097294730330177 30.960042250206833 22.103363938468878 19 30.87810794033436 23.23127835624548 23.608101647523817 22.28251205589634 20 32.50806299625093 22.253124311224735 22.53422447764881 22.704588214875525 21 26.12996410649011 26.278659705888302 25.01993788112231 22.57143830649927 22 25.978233903022574 23.804339377341837 23.847462698327348 26.369964021308245 23 23.647338545753843 28.57228799563869 23.400843513453946 24.379529945153525 24 23.76611401380159 23.456850592067223 32.75109751513842 20.025937878992767 25 21.503310912755666 23.13252062732187 31.323023487835496 24.04114497208697 26 20.998714818557296 29.883822578944958 25.27239564422515 23.845066958272596 27 22.21953071179034 28.530815073357562 26.066929523716233 23.182724691135867 28 19.435308097494907 26.711223882440503 33.14900331889856 20.704464701166035 29 20.472929734541353 24.363771299460055 32.22217134971736 22.941127616281236 30 22.22698412529401 26.72948474552449 28.72465706312083 22.31887406606067 31 29.895801279218716 23.864232878710602 23.202742430260006 23.03722341181068 32 30.069678768525726 24.460293004332563 24.523167871102796 20.946860356038915 33 27.91154288853846 24.476584036704867 24.83631771559265 22.775555359164027 34 21.65780952695314 25.092395708111546 28.428277399014235 24.82151736592108 35 22.69644269868937 24.117169789824384 29.12527803894302 24.061109472543222 36 29.75402670664536 24.352804133876084 24.837701920957613 21.055467238520944 37 23.43944154766937 28.495091927207834 26.460310040706286 21.60515648441651 38 23.53819927659298 30.087992870277596 22.59608780972926 23.777720043400162 39 23.273762813216393 28.839705824416743 24.45544828555518 23.431083076811685 40 25.08771070533782 24.434099579733957 24.06238720057242 26.415802514355807 41 20.807854194195492 23.17127837754095 25.442706142783976 30.578161285479577 42 23.4208080139102 25.305456856980708 23.432893191519717 27.84084193758937 43 23.166912806774516 25.29635304477266 25.563770873550713 25.97296327490212 44 22.528687656188943 27.811720386257182 26.523664055487465 23.135927902066406 45 20.625777950034447 30.439048646300392 23.364428264621733 25.570745139043428 46 23.321145227632574 28.921373940949803 25.493708786616224 22.263772044801403 47 23.62135807582677 24.394330294825096 27.272199725927337 24.712111903420798 48 25.15755983760077 21.625014507537 28.79205721666115 24.425368438201087 49 22.33207725569574 22.500364684875002 30.218747038599098 24.94881102083016 50 21.25324888970758 28.857008391478832 26.162439693898953 23.72730302491463 51 20.790977536476476 29.97118723294153 24.245794411430555 24.99204081915144 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 508.0 1 1326.5 2 2145.0 3 5549.5 4 8954.0 5 6787.0 6 4620.0 7 4689.5 8 4759.0 9 4937.0 10 5115.0 11 5153.0 12 5191.0 13 5301.5 14 5412.0 15 5157.0 16 4902.0 17 4649.0 18 4396.0 19 4272.5 20 4149.0 21 4643.0 22 5137.0 23 5263.5 24 5390.0 25 6114.5 26 8199.5 27 9560.0 28 11984.0 29 14408.0 30 16346.0 31 18284.0 32 20871.0 33 23458.0 34 27040.5 35 30623.0 36 33227.0 37 35831.0 38 44292.5 39 52754.0 40 75297.0 41 97840.0 42 122199.5 43 146559.0 44 155144.0 45 163729.0 46 160738.5 47 157748.0 48 149451.0 49 141154.0 50 135414.0 51 129674.0 52 123714.0 53 117754.0 54 112490.5 55 107227.0 56 107376.0 57 107525.0 58 103165.5 59 98806.0 60 96566.5 61 94327.0 62 84967.0 63 75607.0 64 68709.5 65 61812.0 66 51936.5 67 42061.0 68 35338.5 69 28616.0 70 24078.5 71 19541.0 72 17220.0 73 14899.0 74 11859.5 75 7453.0 76 6086.0 77 4539.0 78 2992.0 79 2489.5 80 1987.0 81 1256.5 82 526.0 83 437.5 84 349.0 85 249.0 86 149.0 87 96.5 88 44.0 89 36.5 90 29.0 91 28.5 92 28.0 93 17.5 94 7.0 95 4.5 96 2.0 97 1.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1878334.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.955994902728918 #Duplication Level Percentage of deduplicated Percentage of total 1 80.0343622873905 15.97165325850324 2 6.8053095873592175 2.716134468736655 3 2.103426153498474 1.2592788479244672 4 1.0238576530346717 0.817283924203196 5 0.6370044036796113 0.6356028316423098 6 0.45455764828545775 0.5442690067308623 7 0.36954103411052097 0.5162191295141111 8 0.318862456067706 0.5090574038367012 9 0.25224229852688695 0.4530371421289664 >10 4.796951967012988 25.608254949371716 >50 2.778973237817793 39.09530302431692 >100 0.42115811370868905 10.981442463200128 >500 0.0029489110416300213 0.3736876810925978 >1k 8.042484658990968E-4 0.5187758687981275 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4280 0.2278614985407281 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 4059 0.2160957529385083 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.04679678906946262 0.0 2 0.0 0.0 0.0 0.16759532649677852 0.0 3 0.0 0.0 0.0 0.2487310563510004 0.0 4 0.0 0.0 0.0 0.4169652468623791 0.0 5 0.0 0.0 0.0 0.7269740099471127 0.0 6 0.0 0.0 0.0 1.099112298451713 0.0 7 0.0 0.0 0.0 1.3106295259522533 0.0 8 0.0 0.0 0.0 1.8355095526141783 0.0 9 0.0 0.0 0.0 2.055757921647588 0.0 10 0.0 0.0 0.0 2.3809397050790753 0.0 11 0.0 0.0 0.0 2.708091319222247 0.0 12 0.0 0.0 0.0 2.9806732987849873 0.0 13 0.0 0.0 0.0 3.099661721504269 0.0 14 0.0 0.0 0.0 3.147044135920449 0.0 15 0.0 0.0 0.0 3.216254404168801 0.0 16 0.0 0.0 0.0 3.3746926797896433 0.0 17 0.0 0.0 0.0 3.546280906377673 0.0 18 0.0 0.0 0.0 3.7779755890060023 0.0 19 0.0 0.0 0.0 3.898028785082951 0.0 20 0.0 0.0 0.0 4.021382778568667 0.0 21 0.0 0.0 0.0 4.1914270837880805 0.0 22 0.0 0.0 0.0 4.358490023606025 0.0 23 0.0 0.0 0.0 4.554035650741562 0.0 24 0.0 0.0 0.0 4.706564434227353 0.0 25 0.0 0.0 0.0 4.829332802366352 0.0 26 0.0 0.0 0.0 4.961045266709754 0.0 27 0.0 0.0 0.0 5.07833005205677 0.0 28 0.0 0.0 0.0 5.20461217227607 0.0 29 0.0 0.0 0.0 5.340796684721673 0.0 30 0.0 0.0 0.0 5.514461219357154 0.0 31 0.0 0.0 0.0 5.6721009149597466 0.0 32 0.0 0.0 0.0 5.821062707697353 0.0 33 0.0 0.0 0.0 5.9725267178254775 0.0 34 0.0 0.0 0.0 6.135277325544871 0.0 35 0.0 0.0 0.0 6.3165017510197865 0.0 36 0.0 0.0 0.0 6.4758983226625295 0.0 37 0.0 0.0 0.0 6.640033135746891 0.0 38 0.0 0.0 0.0 6.815241591750988 0.0 39 0.0 0.0 0.0 6.989598229068951 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACTACCG 20 7.0344296E-4 45.000004 10 GTATCGA 20 7.0344296E-4 45.000004 9 CGGTAAT 20 7.0344296E-4 45.000004 35 ACGTTAG 45 1.929402E-8 40.0 1 CGCATCG 45 1.929402E-8 40.0 21 TATACGT 45 1.929402E-8 40.0 23 TATGGGT 375 0.0 39.600002 4 TCGTTAC 40 3.4597906E-7 39.375004 37 GTTACGG 195 0.0 39.23077 2 TACGTAG 110 0.0 38.863636 1 ATAGACG 35 6.250406E-6 38.571426 1 TCGAGAC 35 6.250406E-6 38.571426 24 ATACCGG 70 0.0 38.571426 2 TGCGTAT 35 6.250406E-6 38.571426 17 AGTAACG 65 9.094947E-12 38.076927 1 GTTGATC 520 0.0 37.644234 16 CGTTTTT 3935 0.0 37.623886 1 TGACGTA 30 1.1401976E-4 37.500004 13 GCGATCG 30 1.1401976E-4 37.500004 9 ACGTATA 30 1.1401976E-4 37.500004 29 >>END_MODULE