##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545354_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 4755374 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.159220284251038 31.0 31.0 33.0 30.0 34.0 2 31.515825463990844 31.0 31.0 34.0 30.0 34.0 3 31.64726496801303 31.0 31.0 34.0 30.0 34.0 4 35.46136097812706 37.0 35.0 37.0 33.0 37.0 5 35.37740165126865 37.0 35.0 37.0 33.0 37.0 6 35.43438581276678 37.0 35.0 37.0 33.0 37.0 7 35.860896955738916 37.0 35.0 37.0 35.0 37.0 8 35.9166038254825 37.0 35.0 37.0 35.0 37.0 9 37.78453724144515 39.0 37.0 39.0 35.0 39.0 10 37.06963048542554 39.0 37.0 39.0 33.0 39.0 11 36.73237099752827 39.0 35.0 39.0 32.0 39.0 12 36.22631258866285 38.0 35.0 39.0 32.0 39.0 13 36.01976858181922 38.0 35.0 39.0 31.0 39.0 14 37.00056168032209 39.0 35.0 41.0 31.0 41.0 15 37.200857598161576 39.0 35.0 41.0 32.0 41.0 16 37.249588360452826 39.0 35.0 41.0 32.0 41.0 17 37.17265981603129 39.0 35.0 41.0 32.0 41.0 18 37.09255108010432 39.0 35.0 41.0 32.0 41.0 19 37.053229041501254 39.0 35.0 41.0 32.0 41.0 20 36.92678704135574 38.0 35.0 41.0 31.0 41.0 21 36.81109792836484 38.0 35.0 41.0 31.0 41.0 22 36.71542259347004 38.0 35.0 41.0 31.0 41.0 23 36.61150542523049 38.0 35.0 40.0 31.0 41.0 24 36.526552485672 38.0 35.0 40.0 31.0 41.0 25 36.40927863928263 38.0 35.0 40.0 30.0 41.0 26 36.273680682108285 38.0 35.0 40.0 30.0 41.0 27 36.13926622806114 38.0 35.0 40.0 30.0 41.0 28 36.04650801388072 38.0 35.0 40.0 30.0 41.0 29 36.1592659168343 38.0 35.0 40.0 30.0 41.0 30 36.10569116119994 38.0 35.0 40.0 30.0 41.0 31 35.99272002580659 38.0 35.0 40.0 30.0 41.0 32 35.84829836727879 38.0 34.0 40.0 29.0 41.0 33 35.625402754862186 38.0 34.0 40.0 28.0 41.0 34 35.42488414160484 38.0 34.0 40.0 27.0 41.0 35 35.26985595665031 38.0 34.0 40.0 26.0 41.0 36 35.12966298760097 38.0 34.0 40.0 25.0 41.0 37 35.02945825081266 38.0 34.0 40.0 25.0 41.0 38 34.96003679205884 38.0 34.0 40.0 25.0 41.0 39 34.88316103002624 38.0 34.0 40.0 25.0 41.0 40 34.76573430396852 37.0 33.0 40.0 24.0 41.0 41 34.69106173352506 37.0 33.0 40.0 24.0 41.0 42 34.64023439586455 37.0 33.0 40.0 24.0 41.0 43 34.53449907410017 37.0 33.0 40.0 24.0 41.0 44 34.41778922120531 37.0 33.0 40.0 23.0 41.0 45 34.372284703579574 37.0 33.0 40.0 23.0 41.0 46 34.38777538843422 37.0 33.0 40.0 23.0 41.0 47 34.362684196868635 37.0 33.0 40.0 23.0 41.0 48 34.28248629865916 36.0 33.0 40.0 23.0 41.0 49 34.234461684822264 36.0 33.0 40.0 24.0 41.0 50 34.115589646576694 36.0 33.0 40.0 24.0 41.0 51 33.87921580931384 36.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 3.0 11 6.0 12 9.0 13 22.0 14 43.0 15 130.0 16 472.0 17 1065.0 18 2403.0 19 4723.0 20 8184.0 21 12959.0 22 19463.0 23 28535.0 24 41384.0 25 59403.0 26 78227.0 27 90492.0 28 99076.0 29 111093.0 30 130801.0 31 157115.0 32 191316.0 33 243590.0 34 382873.0 35 509812.0 36 364591.0 37 466499.0 38 667040.0 39 1083594.0 40 449.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.6201371332728 23.303046195735604 27.720532601641846 14.356284069349751 2 32.342566536301874 25.057923940367253 28.99420739567487 13.605302127655994 3 28.777442110757217 25.596514595907706 31.725349047204276 13.900694246130799 4 25.43423503598245 27.88956241927554 31.572280119292408 15.103922425449607 5 23.261177774871125 32.14190934298753 30.263739508185893 14.333173373955447 6 21.27843151768925 40.977933596810686 27.320143483982545 10.423491401517525 7 88.19230622028887 3.4257663014517887 6.683112621636068 1.6988148566232646 8 89.16503728203081 2.531178409942099 6.454339868956679 1.8494444390704075 9 84.1440862485264 4.653787483381959 8.315960006510528 2.886166261581108 10 42.608551924622546 29.125175012522675 15.781808118562282 12.4844649442925 11 34.49600388949429 24.99567857333619 24.461356772359018 16.046960764810507 12 30.60362865255183 23.567273573014447 28.53056352665427 17.29853424777946 13 22.773119422362996 31.164720167120397 29.615273162531487 16.446887247985124 14 19.98059458625126 33.00329269580058 30.021886816893893 16.99422590105426 15 19.3505284757834 24.752353863229263 39.14543840295212 16.751679258035225 16 21.353020813925465 22.65908002188682 37.22950077112757 18.758398393060148 17 21.71408600038609 22.349114917144266 29.243840757845756 26.692958324623888 18 23.71802932850287 24.30601672970412 31.419442508622875 20.556511433170137 19 27.717756794733706 24.951496980048258 27.052278117346816 20.27846810787122 20 28.52782977742655 25.018663095689213 26.070189221710006 20.38331790517423 21 25.260074181336734 26.510133587810337 28.618779511348635 19.61101271950429 22 24.656441323016864 24.47832704641107 27.400557768957817 23.464673861614248 23 21.92630905581769 28.36481420809383 27.602203317762182 22.1066734183263 24 21.255404937655797 25.952343601155242 33.24762679023774 19.544624670951222 25 21.19707093490438 26.534548071297863 30.987257784561212 21.281123209236537 26 20.878378861473358 29.69945160990492 27.823426716805027 21.59874281181669 27 21.526887264808195 28.284126548195786 29.195116935071773 20.993869251924245 28 19.783028632448257 27.27108319976515 32.87425973225239 20.071628435534198 29 20.25769161374058 25.117477615851037 32.53096391577193 22.09386685463646 30 22.147427310659477 26.594627467786967 30.340242428881513 20.91770279267204 31 25.322151317646096 26.011245382592413 26.87218712976098 21.79441617000051 32 26.25660989020001 25.775028420477547 27.087185992100725 20.881175697221714 33 25.166727159630348 25.797045616180768 26.863733535995276 22.172493688193608 34 21.136844336533784 26.64328820404031 29.63403088800166 22.585836571424245 35 21.811281299851494 26.467424013337332 29.41110415290154 22.310190533909633 36 26.095297656924565 26.166122790762618 26.94114069682006 20.797438855492754 37 22.600830134496256 28.84240019817579 27.613769179879437 20.943000487448515 38 22.434639210291348 29.344989479271245 26.413337836308987 21.807033474128428 39 22.346948946602307 28.653224751617856 26.75636027786668 22.243466023913154 40 23.87116134293538 26.428815062705898 26.600767889129223 23.099255705229492 41 20.55892974979465 25.703530363752673 27.39980073071014 26.337739155742533 42 22.701474163756625 26.997834450034848 25.933417644963363 24.367273741245167 43 22.396513922984816 26.761259997636362 27.43977655595543 23.402449523423392 44 22.236169016359174 28.370849485235023 27.558883906922986 21.834097591482816 45 20.94577629435666 29.57046070403716 25.810861564200838 23.672901437405343 46 22.463616952105134 28.46261934392542 27.15441519426232 21.919348509707124 47 22.229586989372443 26.902615861549478 28.088284959290267 22.779512189787805 48 23.22572315027167 25.4810031766166 28.471093966531342 22.822179706580386 49 22.082973915406022 24.785642517286757 29.800200783366353 23.33118278394086 50 20.927880751335227 28.8516528878696 27.651452861541493 22.569013499253685 51 20.44011680259008 29.39672042619571 26.442063232040212 23.721099539173995 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1225.0 1 2518.5 2 3812.0 3 19516.5 4 35221.0 5 26580.0 6 17939.0 7 18020.0 8 18101.0 9 18831.0 10 19561.0 11 19788.0 12 20015.0 13 19706.5 14 19398.0 15 18990.5 16 18583.0 17 18694.0 18 18805.0 19 18369.5 20 17934.0 21 19222.0 22 20510.0 23 20524.0 24 20538.0 25 25654.0 26 35605.5 27 40441.0 28 49259.0 29 58077.0 30 68273.5 31 78470.0 32 91496.0 33 104522.0 34 119330.5 35 134139.0 36 145858.0 37 157577.0 38 179161.5 39 200746.0 40 234367.0 41 267988.0 42 311168.0 43 354348.0 44 368225.5 45 382103.0 46 384532.0 47 386961.0 48 388789.0 49 390617.0 50 376382.0 51 362147.0 52 339857.5 53 317568.0 54 291561.5 55 265555.0 56 246096.0 57 226637.0 58 207616.0 59 188595.0 60 174217.0 61 159839.0 62 141747.5 63 123656.0 64 109068.0 65 94480.0 66 81104.0 67 67728.0 68 56797.5 69 45867.0 70 39138.5 71 32410.0 72 26516.0 73 20622.0 74 17721.5 75 11716.0 76 8611.0 77 6425.0 78 4239.0 79 3188.5 80 2138.0 81 1545.5 82 953.0 83 748.5 84 544.0 85 395.0 86 246.0 87 232.5 88 219.0 89 133.5 90 48.0 91 34.5 92 21.0 93 24.0 94 27.0 95 14.5 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 4755374.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.54301923626445 #Duplication Level Percentage of deduplicated Percentage of total 1 79.22726821643067 15.48340026790388 2 7.874750518379628 3.0779280172295307 3 2.5503544574487513 1.495248786636412 4 1.259330319984611 0.9844446667308129 5 0.8026661866235775 0.7843260362741803 6 0.5495022617085151 0.64433599625642 7 0.4370354074267434 0.5978693961988663 8 0.3363111012950544 0.5258027457582826 9 0.28296319251531477 0.4976959603033438 >10 3.7559623152552284 17.976720486537666 >50 1.735822471373569 24.75458772737317 >100 1.183894106653993 32.045057104548505 >500 0.0032679828192169504 0.419856734729314 >1k 6.535965638406274E-4 0.2023921497342161 >5k 1.0893276064010457E-4 0.1223677371065819 >10k+ 1.0893276064010457E-4 0.3879661866789055 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 18224 0.3832295840453348 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 5748 0.12087377354546666 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.042478257230661565 0.0 2 0.0 0.0 0.0 0.13342799115274634 0.0 3 0.0 0.0 0.0 0.21125572878179508 0.0 4 0.0 0.0 0.0 0.34119293245915044 0.0 5 0.0 0.0 0.0 0.6072918765169679 0.0 6 0.0 0.0 0.0 1.0530191736759296 0.0 7 0.0 0.0 0.0 1.3155432148975033 0.0 8 0.0 0.0 0.0 1.9119631810242474 0.0 9 0.0 0.0 0.0 2.2067664919730814 0.0 10 0.0 0.0 0.0 2.562238006936994 0.0 11 0.0 0.0 0.0 2.879920696037788 0.0 12 0.0 0.0 0.0 3.1560714257175144 0.0 13 0.0 0.0 0.0 3.290866291484119 0.0 14 0.0 0.0 0.0 3.3613759927189744 0.0 15 0.0 0.0 0.0 3.438783153543759 0.0 16 0.0 0.0 0.0 3.583040997406303 0.0 17 0.0 0.0 0.0 3.7535218050147057 0.0 18 0.0 0.0 0.0 3.962590534414328 0.0 19 0.0 0.0 0.0 4.088132710487125 0.0 20 0.0 0.0 0.0 4.22372667218183 0.0 21 0.0 0.0 0.0 4.396583738734325 0.0 22 0.0 0.0 0.0 4.585485810369489 0.0 23 0.0 0.0 0.0 4.8026506432511935 0.0 24 0.0 0.0 0.0 4.967012058357555 0.0 25 0.0 0.0 0.0 5.113393815081632 0.0 26 0.0 0.0 0.0 5.2538664677058 0.0 27 0.0 0.0 0.0 5.40178332976544 0.0 28 0.0 0.0 0.0 5.557102343580127 0.0 29 0.0 0.0 0.0 5.727204632064692 0.0 30 2.1028840213198793E-5 0.0 0.0 5.9378294956400905 0.0 31 2.1028840213198793E-5 0.0 0.0 6.1254488080222504 0.0 32 2.1028840213198793E-5 0.0 0.0 6.31674816744172 0.0 33 2.1028840213198793E-5 0.0 0.0 6.502348711163412 0.0 34 2.1028840213198793E-5 0.0 0.0 6.698779107594902 0.0 35 2.1028840213198793E-5 0.0 0.0 6.91478735426488 0.0 36 2.1028840213198793E-5 0.0 0.0 7.111385981418076 0.0 37 2.1028840213198793E-5 0.0 0.0 7.317132154064013 0.0 38 2.1028840213198793E-5 0.0 0.0 7.538797158751341 0.0 39 2.1028840213198793E-5 0.0 0.0 7.831308326116936 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 17795 0.0 42.395336 1 GACCGAT 2795 0.0 38.640434 9 AGGGCGA 4935 0.0 38.206688 6 CGTTAGG 695 0.0 37.55396 2 AGTACGG 585 0.0 37.307693 2 GGGCGAT 10440 0.0 36.853447 7 TTGCGAG 625 0.0 36.719997 1 ACGGGAT 1645 0.0 36.38298 5 GCGAGAC 1150 0.0 36.0 21 TATAGCG 325 0.0 36.0 1 TAAGGGA 5250 0.0 35.87143 4 ATAGCGG 1115 0.0 35.11211 2 TAGGGAC 4325 0.0 35.063587 5 TGGGCGA 3545 0.0 35.035263 6 ATAGGGC 2525 0.0 34.930695 4 TACGGGA 1620 0.0 34.72222 4 ACACGAC 1215 0.0 34.62963 26 AGGGATT 6630 0.0 34.615383 6 GGCGATA 2090 0.0 34.557415 8 AGGGACC 4115 0.0 34.501823 6 >>END_MODULE