##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545352_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 4679915 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.176601711783228 31.0 31.0 33.0 30.0 33.0 2 31.53523429378525 31.0 31.0 34.0 30.0 34.0 3 31.707954524815086 31.0 31.0 34.0 30.0 34.0 4 35.51171677263369 37.0 35.0 37.0 33.0 37.0 5 35.41602913728134 37.0 35.0 37.0 33.0 37.0 6 35.47603621005937 37.0 35.0 37.0 33.0 37.0 7 35.83027255836912 37.0 35.0 37.0 35.0 37.0 8 35.872241696697486 37.0 35.0 37.0 35.0 37.0 9 37.7571616151148 39.0 37.0 39.0 35.0 39.0 10 37.097677842439445 39.0 37.0 39.0 33.0 39.0 11 36.737106336333035 39.0 35.0 39.0 32.0 39.0 12 36.10438629761438 38.0 35.0 39.0 32.0 39.0 13 35.84668866849077 38.0 35.0 39.0 31.0 39.0 14 36.82527866424925 39.0 35.0 41.0 31.0 41.0 15 37.02392650293862 39.0 35.0 41.0 32.0 41.0 16 37.09797742053007 39.0 35.0 41.0 32.0 41.0 17 37.025233577960286 38.0 35.0 41.0 32.0 41.0 18 36.96722718254498 38.0 35.0 41.0 32.0 41.0 19 36.935676823190164 38.0 35.0 41.0 31.0 41.0 20 36.808847596590965 38.0 35.0 41.0 31.0 41.0 21 36.70180355839796 38.0 35.0 41.0 31.0 41.0 22 36.57394247545094 38.0 35.0 41.0 31.0 41.0 23 36.47658600636977 38.0 35.0 40.0 31.0 41.0 24 36.35079654224489 38.0 35.0 40.0 30.0 41.0 25 36.21799220712342 38.0 35.0 40.0 30.0 41.0 26 36.02860244256573 38.0 35.0 40.0 30.0 41.0 27 35.886245156162026 38.0 34.0 40.0 30.0 41.0 28 35.79824206208873 38.0 34.0 40.0 29.0 41.0 29 35.91625574396116 38.0 35.0 40.0 30.0 41.0 30 35.893808327715355 38.0 35.0 40.0 30.0 41.0 31 35.769518463476366 38.0 34.0 40.0 29.0 41.0 32 35.64789745112892 38.0 34.0 40.0 29.0 41.0 33 35.44606814440006 37.0 34.0 40.0 28.0 41.0 34 35.27128783321919 37.0 34.0 40.0 27.0 41.0 35 35.128736098839404 37.0 34.0 40.0 27.0 41.0 36 34.966091050799 37.0 34.0 40.0 26.0 41.0 37 34.855534341969886 37.0 33.0 40.0 25.0 41.0 38 34.78763439079556 37.0 33.0 40.0 26.0 41.0 39 34.70445937586473 37.0 33.0 40.0 25.0 41.0 40 34.56275039183404 36.0 33.0 40.0 24.0 41.0 41 34.49090528353613 36.0 33.0 40.0 24.0 41.0 42 34.413438705617516 36.0 33.0 40.0 24.0 41.0 43 34.280723474678496 36.0 33.0 40.0 24.0 41.0 44 34.17008001213697 36.0 33.0 40.0 23.0 41.0 45 34.12478709549212 35.0 33.0 40.0 23.0 41.0 46 34.11248537633696 35.0 33.0 40.0 23.0 41.0 47 34.07167651549227 35.0 33.0 40.0 23.0 41.0 48 33.96212858566876 35.0 33.0 40.0 23.0 41.0 49 33.9125749078776 35.0 33.0 40.0 24.0 41.0 50 33.78983143924623 35.0 33.0 39.0 24.0 41.0 51 33.55429489638166 35.0 32.0 39.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 7.0 10 6.0 11 13.0 12 8.0 13 22.0 14 60.0 15 150.0 16 428.0 17 1123.0 18 2539.0 19 5084.0 20 8442.0 21 13466.0 22 20275.0 23 28965.0 24 40402.0 25 56713.0 26 73767.0 27 86909.0 28 97979.0 29 111893.0 30 132861.0 31 161149.0 32 197812.0 33 254769.0 34 418704.0 35 569861.0 36 367133.0 37 455604.0 38 623304.0 39 949953.0 40 514.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.00681422632676 23.799427981063758 27.944524633460222 14.249233159149258 2 30.761092883097234 25.938718972459966 29.92926153573302 13.370926608709773 3 29.217966565632068 25.911218472985087 30.63359056735005 14.237224394032797 4 26.710292815147284 28.19303342047879 29.873170773400798 15.223502990973126 5 23.74867919609651 33.02239463750944 28.96351749978365 14.2654086666104 6 22.545943676327454 41.0681817939001 25.461488082582694 10.924386447189747 7 88.56536924281745 3.8938741408764903 5.733736617011206 1.807019999294859 8 89.34360987325624 3.085141503638421 5.563989944261808 2.007258678843526 9 84.4366190411578 4.919020965124367 7.413681658748075 3.2306783349697588 10 47.96773018313367 24.046035024140398 14.47859629929176 13.507638493434177 11 39.28218781751378 23.642822572632195 20.085407534111198 16.989582075742828 12 34.49366067546099 21.90003450917378 25.90841927684584 17.697885538519394 13 23.713507617125526 31.711601599601703 26.323213135281303 18.25167764799147 14 20.282911121248997 33.3366524819361 28.022367927622614 18.358068469192283 15 19.515183502264463 23.48679409775605 38.6942497887248 18.303772611254693 16 20.981769968044294 20.005064194541994 37.22088969564618 21.792276141767534 17 20.994825760724286 20.500543279098018 28.536586668774966 29.96804429140273 18 24.14990443202494 23.02067452079792 30.26193851811411 22.567482529063028 19 28.720137011035458 24.410592927435648 24.235311966136138 22.63395809539276 20 30.610385017676606 23.16604040885358 24.324181101579835 21.89939347188998 21 26.057118558777244 25.54683151296551 25.79012653007587 22.60592339818138 22 25.528647422015144 24.573202718425442 24.386596765112188 25.511553094447226 23 24.070672223747653 27.864459076714 24.41845631811689 23.64641238142146 24 23.665216141746164 24.375998282020078 31.501982407800146 20.456803168433616 25 22.864517838465016 25.199474776785475 28.799817945411398 23.13618943933811 26 21.576139737580704 29.143926759353533 25.564395934541544 23.715537568524216 27 22.580324642648424 27.458255117881414 26.95933579990235 23.002084439567813 28 20.037116058731836 26.851620168315023 31.341936765945533 21.769327007007604 29 21.033458941027774 24.298240459495524 31.059410267066816 23.608890332409885 30 22.974007006537512 26.326332850062446 28.999971153322228 21.69968899007781 31 27.434515370471473 25.189581434705545 24.802053028740907 22.573850166082078 32 28.83024584848229 24.75269315788855 24.568330835068586 21.848730158560574 33 26.936151618138364 25.60809330938703 24.691409993557574 22.76434507891703 34 22.213309429765285 25.553092310437265 28.116514936702906 24.117083323094544 35 23.7669060228658 24.869191000263893 28.34799349988194 23.015909476988362 36 28.213995339658947 26.152889528976488 24.915708939158083 20.717406192206482 37 23.836544039795594 28.69926056349314 26.621274104337367 20.8429212923739 38 23.798316849771844 28.881998925194154 24.594506524156955 22.725177700877044 39 23.545598584589676 28.551843356129332 25.424350655941403 22.47820740333959 40 25.006330243177494 25.95104825621833 25.506553003633613 23.536068496970564 41 21.593383640514837 24.58140799565804 26.050815025486575 27.77439333834055 42 23.632373664906307 26.854205685359673 23.847334834072843 25.666085815661184 43 23.67602830393287 26.51734059272444 25.329562609577312 24.477068493765376 44 22.721203269717506 28.62398141846593 25.501040082992958 23.1537752288236 45 21.236582288353528 29.238800277355466 24.260483363479892 25.264134070811117 46 23.406343918639546 28.477995861035936 25.924958038767798 22.190702181556716 47 23.907164980560545 25.675487695823534 27.111261636162194 23.306085687453727 48 24.72626105388666 23.58408218952695 27.96352070497007 23.726136051616322 49 22.616564617092404 24.708653896491708 28.406584307620967 24.268197178794914 50 21.64329907701315 27.87894651932781 26.940296992573582 23.53745741108546 51 21.468958303729877 28.313655269379893 25.437556023987618 24.77983040290262 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1237.0 1 3239.0 2 5241.0 3 16988.5 4 28736.0 5 21395.0 6 14054.0 7 13830.0 8 13606.0 9 14392.0 10 15178.0 11 15510.0 12 15842.0 13 16099.0 14 16356.0 15 15816.5 16 15277.0 17 14934.0 18 14591.0 19 14601.5 20 14612.0 21 15002.5 22 15393.0 23 16343.5 24 17294.0 25 18244.0 26 23261.0 27 27328.0 28 37540.0 29 47752.0 30 53852.5 31 59953.0 32 71155.0 33 82357.0 34 92231.0 35 102105.0 36 112742.5 37 123380.0 38 136606.5 39 149833.0 40 190559.5 41 231286.0 42 275961.0 43 320636.0 44 331681.0 45 342726.0 46 347693.0 47 352660.0 48 352241.5 49 351823.0 50 346187.0 51 340551.0 52 327113.0 53 313675.0 54 293351.0 55 273027.0 56 268237.5 57 263448.0 58 249063.5 59 234679.0 60 224601.0 61 214523.0 62 198154.5 63 181786.0 64 160230.0 65 138674.0 66 117590.0 67 96506.0 68 85399.0 69 74292.0 70 63836.5 71 53381.0 72 45990.5 73 38600.0 74 32440.5 75 20617.0 76 14953.0 77 11629.0 78 8305.0 79 6523.5 80 4742.0 81 3648.5 82 2555.0 83 1779.5 84 1004.0 85 638.0 86 272.0 87 184.5 88 97.0 89 69.5 90 42.0 91 34.5 92 27.0 93 24.5 94 22.0 95 18.5 96 15.0 97 11.5 98 8.0 99 4.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 4679915.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.158766137864323 #Duplication Level Percentage of deduplicated Percentage of total 1 79.87201099393457 14.503771685997858 2 8.046490498126053 2.9222867837203683 3 2.5865180175524456 1.4090392737632191 4 1.2366598117660295 0.8982486525581858 5 0.7057653406439149 0.6407913884481501 6 0.5425631099168755 0.591136597680775 7 0.38162503970408707 0.48508878938377925 8 0.28023098405256797 0.4070919123195334 9 0.24615041810553798 0.4022809089404389 >10 3.023139972640339 13.263292494672497 >50 1.4696094607245227 19.59674839648822 >100 1.601170230162639 43.05640273968705 >500 0.0059309725518200355 0.7328495921227027 >1k 0.001897911216582377 0.6056999832610327 >5k 1.1861945103639856E-4 0.16673981402644575 >10k+ 1.1861945103639856E-4 0.31853098692973514 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 14788 0.315988645092913 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 7741 0.16540898712903973 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.03908190640214619 0.0 2 0.0 0.0 0.0 0.10835666887112266 0.0 3 0.0 0.0 0.0 0.17925539245905106 0.0 4 0.0 0.0 0.0 0.2987447421587785 0.0 5 0.0 0.0 0.0 0.5081075190468203 0.0 6 0.0 0.0 0.0 0.8681781613554947 0.0 7 0.0 0.0 0.0 1.0728399981623598 0.0 8 0.0 0.0 0.0 1.5540239512897136 0.0 9 0.0 0.0 0.0 1.8069558955664793 0.0 10 0.0 0.0 0.0 2.1376670302772594 0.0 11 0.0 0.0 0.0 2.452352232893119 0.0 12 0.0 0.0 0.0 2.720562232433709 0.0 13 0.0 0.0 0.0 2.849966292122827 0.0 14 0.0 0.0 0.0 2.9111853527254232 0.0 15 0.0 0.0 0.0 2.9863576582053306 0.0 16 0.0 0.0 0.0 3.1250781264189627 0.0 17 0.0 0.0 0.0 3.2831792885127187 0.0 18 0.0 0.0 0.0 3.4796572159964443 0.0 19 0.0 0.0 0.0 3.592479777944685 2.1367909459894035E-5 20 0.0 0.0 0.0 3.7168410110012684 2.1367909459894035E-5 21 0.0 0.0 0.0 3.868083074158398 2.1367909459894035E-5 22 0.0 0.0 0.0 4.043513610824128 2.1367909459894035E-5 23 0.0 2.1367909459894035E-5 0.0 4.235333334045597 2.1367909459894035E-5 24 0.0 2.1367909459894035E-5 0.0 4.392558411851497 2.1367909459894035E-5 25 0.0 2.1367909459894035E-5 0.0 4.523821479663626 2.1367909459894035E-5 26 0.0 2.1367909459894035E-5 0.0 4.642285169709279 2.1367909459894035E-5 27 0.0 2.1367909459894035E-5 0.0 4.765578007292867 2.1367909459894035E-5 28 0.0 2.1367909459894035E-5 0.0 4.898678715318548 2.1367909459894035E-5 29 0.0 2.1367909459894035E-5 0.0 5.0470574786080515 2.1367909459894035E-5 30 0.0 2.1367909459894035E-5 0.0 5.237616495171387 2.1367909459894035E-5 31 0.0 2.1367909459894035E-5 0.0 5.3977262407543725 2.1367909459894035E-5 32 0.0 2.1367909459894035E-5 0.0 5.5613616913982415 2.1367909459894035E-5 33 0.0 2.1367909459894035E-5 0.0 5.718351722200083 2.1367909459894035E-5 34 0.0 2.1367909459894035E-5 0.0 5.889444573245454 2.1367909459894035E-5 35 0.0 2.1367909459894035E-5 0.0 6.084234435881848 2.1367909459894035E-5 36 0.0 2.1367909459894035E-5 0.0 6.256075163758316 2.1367909459894035E-5 37 0.0 2.1367909459894035E-5 0.0 6.425437214137436 2.1367909459894035E-5 38 0.0 2.1367909459894035E-5 0.0 6.6084533586614285 2.1367909459894035E-5 39 0.0 2.1367909459894035E-5 0.0 6.820145237680599 2.1367909459894035E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTATACG 55 1.8189894E-12 45.0 1 TCGAACG 60 3.6379788E-12 41.249996 1 CGAATAT 715 0.0 40.27972 14 CGTTTTT 12700 0.0 39.561024 1 CGTTAGG 535 0.0 39.53271 2 GCTACGA 735 0.0 39.489796 10 CCGCGTA 40 3.461264E-7 39.375004 40 GCGATAT 545 0.0 39.220184 9 CGGTCTA 175 0.0 38.571426 31 TATCACG 65 9.094947E-12 38.07692 1 CAATACG 65 9.094947E-12 38.07692 1 CACGACC 1600 0.0 37.828125 27 TATCGTG 90 0.0 37.5 1 ATACTAT 3085 0.0 37.487846 45 GGCGATA 2375 0.0 36.85263 8 GGGCGAT 11780 0.0 36.844227 7 ACACGAC 1625 0.0 36.83077 26 GCGTTAG 395 0.0 36.455696 1 TATGGGA 3025 0.0 36.44628 4 TAGGGTC 1095 0.0 36.36986 5 >>END_MODULE