SRR1545350_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545350_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	46525
Sequences flagged as poor quality	0
Sequence length	51
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	131	0.2815690488984417	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	60	0.1289629231595916	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AGGGGTC	35	1.17865056E-7	45.000004	6
AGCCCAC	20	6.963608E-4	45.0	11
ACTAATC	40	6.5756467E-9	45.0	10
GTAGACA	20	6.963608E-4	45.0	42
GGATGAC	20	6.963608E-4	45.0	8
GTCATGA	20	6.963608E-4	45.0	24
TATACTA	40	6.5756467E-9	45.0	44
GGCACCG	25	3.8331687E-5	45.0	8
CCTACAC	40	6.5756467E-9	45.0	28
TGCAAGG	25	3.8331687E-5	45.0	2
TGTCTGG	20	6.963608E-4	45.0	2
TCAGGGT	20	6.963608E-4	45.0	4
GGACTCA	20	6.963608E-4	45.0	8
AAATATA	40	6.5756467E-9	45.0	35
AGAGGGT	20	6.963608E-4	45.0	4
AATTATA	40	6.5756467E-9	45.0	41
TGACAGG	20	6.963608E-4	45.0	2
AGGGTAG	20	6.963608E-4	45.0	6
GAGCCCA	20	6.963608E-4	45.0	10
AAGGGCG	25	3.8331687E-5	45.0	5