##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545349_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2018348 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.185133584495834 31.0 31.0 33.0 30.0 34.0 2 31.543110008779458 31.0 31.0 34.0 30.0 34.0 3 31.724645601254096 31.0 31.0 34.0 30.0 34.0 4 35.5028924645304 37.0 35.0 37.0 33.0 37.0 5 35.410623936011035 37.0 35.0 37.0 33.0 37.0 6 35.469361576893576 37.0 35.0 37.0 33.0 37.0 7 35.824895904967825 37.0 35.0 37.0 35.0 37.0 8 35.867016986168885 37.0 35.0 37.0 35.0 37.0 9 37.75200114152763 39.0 37.0 39.0 35.0 39.0 10 37.12041233721836 39.0 37.0 39.0 33.0 39.0 11 36.72569447885102 39.0 35.0 39.0 32.0 39.0 12 35.805767389964466 37.0 35.0 39.0 31.0 39.0 13 35.38590768291692 37.0 35.0 39.0 30.0 39.0 14 36.31120797800974 38.0 35.0 41.0 31.0 41.0 15 36.63385947319293 38.0 35.0 41.0 31.0 41.0 16 36.77310305259549 38.0 35.0 41.0 32.0 41.0 17 36.71222702923381 38.0 35.0 41.0 32.0 41.0 18 36.67434654479802 38.0 35.0 40.0 31.0 41.0 19 36.62985421740949 38.0 35.0 40.0 31.0 41.0 20 36.496317285225345 38.0 35.0 40.0 31.0 41.0 21 36.35710145128591 38.0 35.0 40.0 31.0 41.0 22 36.22852897518168 38.0 35.0 40.0 31.0 41.0 23 36.16538426475513 37.0 35.0 40.0 31.0 41.0 24 36.04474897292241 37.0 35.0 40.0 30.0 41.0 25 35.91188437276426 37.0 34.0 40.0 30.0 41.0 26 35.72575591523365 37.0 34.0 40.0 30.0 41.0 27 35.57175769490692 36.0 34.0 40.0 29.0 41.0 28 35.5254985760632 36.0 34.0 40.0 29.0 41.0 29 35.663138864061104 36.0 34.0 40.0 30.0 41.0 30 35.652179901582876 36.0 34.0 40.0 30.0 41.0 31 35.534572828867965 36.0 34.0 40.0 29.0 41.0 32 35.40854203536754 36.0 34.0 40.0 29.0 41.0 33 35.20636332287594 36.0 34.0 40.0 28.0 41.0 34 35.07294579527416 36.0 34.0 40.0 27.0 41.0 35 34.94164039105249 36.0 34.0 40.0 27.0 41.0 36 34.75350137835497 36.0 33.0 40.0 26.0 41.0 37 34.62440025208735 36.0 33.0 40.0 25.0 41.0 38 34.60539262803045 35.0 33.0 40.0 26.0 41.0 39 34.566526684199154 35.0 33.0 40.0 25.0 41.0 40 34.40402745215394 35.0 33.0 40.0 24.0 41.0 41 34.386269860301596 35.0 33.0 40.0 24.0 41.0 42 34.3177464936671 35.0 33.0 40.0 24.0 41.0 43 34.165001278273124 35.0 33.0 40.0 24.0 41.0 44 34.04399043177886 35.0 33.0 40.0 24.0 41.0 45 34.00590334273376 35.0 33.0 40.0 23.0 41.0 46 33.9949230757035 35.0 33.0 39.0 23.0 41.0 47 33.96719544895132 35.0 33.0 39.0 24.0 41.0 48 33.90091500573737 35.0 33.0 39.0 23.0 41.0 49 33.882140245388804 35.0 33.0 39.0 24.0 41.0 50 33.74802759484489 35.0 33.0 39.0 24.0 41.0 51 33.518734133063276 35.0 33.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 3.0 11 4.0 12 7.0 13 13.0 14 29.0 15 85.0 16 212.0 17 545.0 18 1099.0 19 2153.0 20 3708.0 21 5993.0 22 8767.0 23 12584.0 24 17583.0 25 24083.0 26 31357.0 27 37735.0 28 43057.0 29 49934.0 30 59251.0 31 71826.0 32 89195.0 33 116189.0 34 205119.0 35 297562.0 36 145157.0 37 175963.0 38 243652.0 39 375239.0 40 243.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.81500712463856 24.422448457847707 27.51393714067148 13.24860727684225 2 30.351208017646115 25.281368723332147 30.833434075788713 13.53398918323302 3 30.079005206237973 25.604801550575022 30.384799846210864 13.93139339697614 4 26.45510090430391 28.049721851732208 30.10729566952775 15.387881574436124 5 23.84905873516361 33.01140338534287 28.533582910380172 14.605954969113355 6 22.554980607903097 41.36437323989718 25.65385156573594 10.42679458646378 7 88.32679002828056 4.379571808231287 5.421810312195915 1.8718278512922448 8 89.83074276586595 3.118788236716364 5.023960189224058 2.0265088081936318 9 85.22142861389612 4.541833222021178 7.300772711147929 2.9359654529347763 10 54.578150051428196 20.762772326675083 12.083743734975336 12.575333886921383 11 46.35949796566301 20.93851010826676 17.89086916626865 14.81112275980158 12 40.48271160374723 21.154875175143236 23.184158529649 15.178254691460541 13 22.97819801144302 37.31720198895334 23.78058689581777 15.92401310378587 14 18.03242057365727 39.31442942446 26.421063166510432 16.232086835372293 15 16.96793615372572 22.77753885851201 44.16091774064731 16.093607247114967 16 18.790614898917333 17.57115224926524 42.90434553407044 20.733887317746987 17 18.881332654230093 18.621417119347107 27.39274892139512 35.104501305027675 18 23.43525497089699 22.81301341493142 31.545551114079434 22.206180500092152 19 30.29264527227217 23.339384486718842 24.147471100127433 22.220499140881554 20 32.33362135766478 22.198946861492665 23.67748277304013 21.78994900780242 21 25.30440736681682 26.4102127086112 26.21321992044979 22.072160004122182 22 25.218891885839312 24.402927542723056 23.37411586109036 27.004064710347276 23 23.715484148422373 28.90591711637438 22.90080798752247 24.47779074768078 24 23.260161280413485 23.69982777994677 34.22838876150198 18.811622178137764 25 20.78120324146282 24.21911384954428 32.0528967254408 22.946786183552092 26 19.885520237342618 31.06699142070644 25.59444654737439 23.453041794576553 27 21.261199753461742 30.458919869120688 26.871877396762105 21.408002980655468 28 18.554580280506634 27.49540713494402 34.307562422337476 19.64245016221187 29 18.958177677982192 24.017216059866783 33.659953585803834 23.36465267634719 30 21.162207904682443 28.09188504658265 29.51597048675451 21.22993656198039 31 29.123124456238468 25.981594848856588 22.65872882178891 22.236551873116035 32 30.523626252757207 25.452548321696757 24.28803159811886 19.735793827427184 33 27.287117979654646 26.86048193869442 24.29571114594708 21.556688935703853 34 21.071242422020383 26.415761801235465 27.481187585094347 25.03180819164981 35 22.337129176930837 24.588723054696217 29.08353762582072 23.990610142552228 36 31.06758596634475 24.147272918247992 24.383010263839537 20.40213085156772 37 22.878710707965126 29.496053207870993 26.85592375546734 20.769312328696536 38 22.44271057320145 30.979147302645533 22.93593572565286 23.64220639850016 39 22.373545097277574 30.14376113534435 24.9416354365055 22.541058330872573 40 23.96474740728556 25.936409380344717 24.60125805857067 25.497585153799047 41 19.059944073073623 24.40089617845882 25.922338466904616 30.616821281562938 42 23.41330632774923 25.792281608523403 23.253720369331752 27.540691694395612 43 23.177668073097404 26.11259307116513 25.086159572085688 25.623579283651775 44 21.214428829914368 29.059012618240267 26.01300667674752 23.713551875097853 45 20.05992029124809 32.785921952012245 22.264495518116796 24.889662238622872 46 23.36499949463621 30.358392110775746 25.217653249092827 21.058955145495226 47 23.465774980330448 25.88562527373872 26.848293753108976 23.80030599282185 48 24.284513869758833 22.649662000804618 28.93470303436276 24.131121095073794 49 22.03425771967966 23.029576663687333 30.160111140397987 24.77605447623502 50 20.587133636023125 29.80799148610646 26.402186342493962 23.202688535376456 51 20.928155105066125 30.87054363271349 23.516608632406307 24.684692629814087 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 593.0 1 1632.0 2 2671.0 3 6349.5 4 10028.0 5 7651.5 6 5275.0 7 5313.5 8 5352.0 9 5669.0 10 5986.0 11 6041.0 12 6096.0 13 6273.5 14 6451.0 15 6134.5 16 5818.0 17 5492.5 18 5167.0 19 5130.5 20 5094.0 21 5128.5 22 5163.0 23 5723.0 24 6283.0 25 7578.0 26 8866.0 27 8859.0 28 12777.0 29 16695.0 30 20443.5 31 24192.0 32 26540.0 33 28888.0 34 34195.5 35 39503.0 36 41339.0 37 43175.0 38 53562.0 39 63949.0 40 86071.5 41 108194.0 42 139344.5 43 170495.0 44 179064.5 45 187634.0 46 180801.0 47 173968.0 48 168147.0 49 162326.0 50 156209.5 51 150093.0 52 140748.0 53 131403.0 54 122925.5 55 114448.0 56 106143.5 57 97839.0 58 94664.5 59 91490.0 60 87350.5 61 83211.0 62 75952.5 63 68694.0 64 60621.5 65 52549.0 66 45115.5 67 37682.0 68 34253.5 69 30825.0 70 25532.5 71 20240.0 72 17782.0 73 15324.0 74 11525.0 75 6508.0 76 5290.0 77 3905.5 78 2521.0 79 1913.0 80 1305.0 81 959.5 82 614.0 83 403.5 84 193.0 85 132.5 86 72.0 87 62.5 88 53.0 89 40.0 90 27.0 91 21.0 92 15.0 93 10.5 94 6.0 95 3.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2018348.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.245619162228195 #Duplication Level Percentage of deduplicated Percentage of total 1 80.68112648718784 14.720771074647912 2 7.1897987529267 2.623646597979276 3 2.140163202742085 1.1714580822673997 4 0.9500626542192935 0.6933792547656369 5 0.6212488189093103 0.5667534677401673 6 0.42624280789903696 0.46662383661387724 7 0.33929540089317034 0.4333458267734629 8 0.25191271507891894 0.36770427691622837 9 0.21877407313607403 0.3592501578909239 >10 3.5719114315466953 17.370712521022348 >50 2.4979996939276186 33.838558928764456 >100 1.1059955041587706 26.2051083814455 >500 0.004101343030821069 0.5109497755631683 >1k 0.0013671143436070233 0.6717378176096526 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4876 0.24158371103496523 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 4326 0.21433370261223533 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.9545469859508865E-5 0.0 0.0 0.06024729134916278 0.0 2 4.9545469859508865E-5 0.0 0.0 0.19020505879065452 0.0 3 4.9545469859508865E-5 0.0 0.0 0.2732432662751914 0.0 4 4.9545469859508865E-5 0.0 0.0 0.4245551312261315 0.0 5 4.9545469859508865E-5 0.0 0.0 0.6951229421289093 0.0 6 4.9545469859508865E-5 0.0 0.0 1.0035930374742117 0.0 7 4.9545469859508865E-5 0.0 0.0 1.1772003638619306 0.0 8 4.9545469859508865E-5 0.0 0.0 1.618600954840295 0.0 9 4.9545469859508865E-5 0.0 0.0 1.7977078283824197 0.0 10 4.9545469859508865E-5 0.0 0.0 2.0726356406328343 0.0 11 4.9545469859508865E-5 0.0 0.0 2.3851189190367568 0.0 12 4.9545469859508865E-5 0.0 0.0 2.633787632261632 0.0 13 4.9545469859508865E-5 0.0 0.0 2.740805847158171 0.0 14 4.9545469859508865E-5 0.0 0.0 2.78326631482777 0.0 15 4.9545469859508865E-5 0.0 0.0 2.8515895177640327 0.0 16 4.9545469859508865E-5 0.0 0.0 3.0071622931228905 0.0 17 4.9545469859508865E-5 0.0 0.0 3.184237802400775 0.0 18 4.9545469859508865E-5 0.0 0.0 3.4101155994902763 0.0 19 4.9545469859508865E-5 0.0 0.0 3.520899270096138 0.0 20 4.9545469859508865E-5 0.0 0.0 3.6339620323155373 0.0 21 4.9545469859508865E-5 0.0 0.0 3.795034354828801 0.0 22 4.9545469859508865E-5 0.0 0.0 3.953877131198386 0.0 23 4.9545469859508865E-5 0.0 0.0 4.142645371363114 0.0 24 4.9545469859508865E-5 0.0 0.0 4.294155418193493 0.0 25 4.9545469859508865E-5 0.0 0.0 4.415145455590413 0.0 26 4.9545469859508865E-5 0.0 0.0 4.529595490965879 0.0 27 4.9545469859508865E-5 0.0 0.0 4.642063707546964 0.0 28 4.9545469859508865E-5 0.0 0.0 4.7648869273286865 0.0 29 4.9545469859508865E-5 0.0 0.0 4.892367421277203 0.0 30 4.9545469859508865E-5 0.0 0.0 5.051160652176929 0.0 31 4.9545469859508865E-5 0.0 0.0 5.205891154548175 0.0 32 4.9545469859508865E-5 0.0 0.0 5.345064379383535 0.0 33 4.9545469859508865E-5 0.0 0.0 5.482701694653251 0.0 34 4.9545469859508865E-5 0.0 0.0 5.630743558593464 0.0 35 4.9545469859508865E-5 0.0 0.0 5.815102251940696 0.0 36 4.9545469859508865E-5 0.0 0.0 5.968841844914752 0.0 37 4.9545469859508865E-5 0.0 0.0 6.124761438562627 0.0 38 4.9545469859508865E-5 0.0 0.0 6.276420121802583 0.0 39 4.9545469859508865E-5 0.0 0.0 6.433826079546243 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAACTT 20 7.0345576E-4 45.0 43 ACGTTAG 50 2.1827873E-11 45.0 1 GACCGAA 25 3.8918584E-5 45.0 9 CGTTCGA 20 7.0345576E-4 45.0 39 GGACGTA 20 7.0345576E-4 45.0 8 CTATTCG 20 7.0345576E-4 45.0 1 CGGTATG 25 3.8918584E-5 45.0 6 CCGTTCG 20 7.0345576E-4 45.0 38 TCGAACG 25 3.8918584E-5 45.0 2 TACGTGC 25 3.8918584E-5 45.0 42 GGTCGTA 30 2.1663218E-6 44.999996 8 TATAGCG 95 0.0 42.63158 1 AATACGG 125 0.0 41.4 2 CTATACG 55 6.184564E-11 40.909092 1 ACGAATG 100 0.0 40.5 1 CGACAGG 175 0.0 39.857143 2 TATTACG 85 0.0 39.705883 1 GCAAGTT 40 3.4599543E-7 39.375 44 GTTAGCG 155 0.0 39.193546 1 CACGAAA 75 0.0 39.000004 35 >>END_MODULE