##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545347_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2798779 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.27324272477391 31.0 31.0 33.0 30.0 34.0 2 31.642063914299772 31.0 31.0 34.0 30.0 34.0 3 31.807308830029093 31.0 31.0 34.0 30.0 34.0 4 35.606001760053225 37.0 35.0 37.0 33.0 37.0 5 35.54235329048846 37.0 35.0 37.0 33.0 37.0 6 35.59995590934475 37.0 35.0 37.0 33.0 37.0 7 35.88917095633489 37.0 35.0 37.0 35.0 37.0 8 35.9226044643039 37.0 35.0 37.0 35.0 37.0 9 37.82874281963671 39.0 38.0 39.0 35.0 39.0 10 37.23609331069012 39.0 37.0 39.0 34.0 39.0 11 36.89151233448586 39.0 37.0 39.0 33.0 39.0 12 36.256615474104954 38.0 35.0 39.0 32.0 39.0 13 35.996899362186156 38.0 35.0 39.0 31.0 39.0 14 36.95331178345986 39.0 35.0 41.0 31.0 41.0 15 37.169387436449966 39.0 35.0 41.0 32.0 41.0 16 37.23637772042737 39.0 35.0 41.0 32.0 41.0 17 37.15330327975163 39.0 35.0 41.0 32.0 41.0 18 37.086696377241644 39.0 35.0 41.0 32.0 41.0 19 37.032855041430565 38.0 35.0 41.0 32.0 41.0 20 36.92179160984129 38.0 35.0 41.0 32.0 41.0 21 36.8110590368157 38.0 35.0 41.0 31.0 41.0 22 36.72376525620637 38.0 35.0 41.0 31.0 41.0 23 36.626936960724656 38.0 35.0 40.0 31.0 41.0 24 36.525991512727515 38.0 35.0 40.0 31.0 41.0 25 36.39110697915055 38.0 35.0 40.0 31.0 41.0 26 36.22939324612626 38.0 35.0 40.0 30.0 41.0 27 36.10999189289329 38.0 35.0 40.0 30.0 41.0 28 35.99453511692063 38.0 35.0 40.0 30.0 41.0 29 36.115887678162515 38.0 35.0 40.0 30.0 41.0 30 36.09488459074475 38.0 35.0 40.0 30.0 41.0 31 35.97107631577913 38.0 35.0 40.0 30.0 41.0 32 35.83665805695984 38.0 34.0 40.0 30.0 41.0 33 35.640009804275365 38.0 34.0 40.0 29.0 41.0 34 35.43094792407689 38.0 34.0 40.0 28.0 41.0 35 35.29602051466014 37.0 34.0 40.0 27.0 41.0 36 35.15963997157332 37.0 34.0 40.0 27.0 41.0 37 35.06250582843447 37.0 34.0 40.0 27.0 41.0 38 34.974683960398444 37.0 34.0 40.0 27.0 41.0 39 34.89272286236248 37.0 34.0 40.0 26.0 41.0 40 34.74395906214817 37.0 34.0 40.0 25.0 41.0 41 34.6640685098752 36.0 34.0 40.0 25.0 41.0 42 34.59777674478764 36.0 33.0 40.0 25.0 41.0 43 34.473979903379295 36.0 33.0 40.0 25.0 41.0 44 34.34396856629266 36.0 33.0 40.0 24.0 41.0 45 34.311356487954214 35.0 33.0 40.0 24.0 41.0 46 34.32039828796772 35.0 33.0 40.0 24.0 41.0 47 34.28445547147524 35.0 33.0 40.0 24.0 41.0 48 34.19106617564302 35.0 33.0 40.0 24.0 41.0 49 34.13841035680202 35.0 33.0 40.0 24.0 41.0 50 34.021276778195066 35.0 33.0 39.0 24.0 41.0 51 33.78174589705011 35.0 33.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 3.0 11 4.0 12 7.0 13 11.0 14 35.0 15 91.0 16 264.0 17 593.0 18 1264.0 19 2567.0 20 4343.0 21 6801.0 22 10287.0 23 14929.0 24 21457.0 25 30364.0 26 40520.0 27 48040.0 28 54174.0 29 62454.0 30 74705.0 31 91068.0 32 114149.0 33 150923.0 34 255067.0 35 338219.0 36 224675.0 37 284281.0 38 391418.0 39 575821.0 40 244.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.3268693240874 23.116008802409908 27.733165069482084 13.82395680402061 2 32.5250403836816 25.014336608928396 29.085862084859148 13.374760922530859 3 30.18798554655441 25.812791935340375 30.106342801628855 13.892879716476363 4 26.73440811153721 27.867080609079885 30.04084995635597 15.357661323026933 5 23.90828286191943 32.08877871386058 29.00639886178937 14.996539562430616 6 22.771572889463584 40.81511973614208 25.624209700015616 10.78909767437872 7 88.25498547759577 3.928570280111434 6.012836311834554 1.8036079304582464 8 89.23276900391205 2.9764050680671823 5.838010075107753 1.9528158529130024 9 84.75202936709186 4.358221924632135 7.646048509010536 3.2437001992654655 10 49.474645908090636 22.788294466980066 13.911423517183744 13.825636107745556 11 39.94295369516493 23.512253021764135 20.11298498380901 16.431808299261927 12 34.358697131856424 22.422420634140817 25.70963981078892 17.509242423213838 13 24.634742507357675 29.88224507901481 27.121469755203965 18.36154265842355 14 20.855344419834505 31.490517829382025 29.428511504481058 18.225626246302408 15 20.42008318627516 22.530289101068714 39.00379415452238 18.045833558133744 16 23.53429834938736 20.281022545903053 36.42838537805236 19.75629372665723 17 23.487920982685665 20.311250012952076 27.528718773436562 28.6721102309257 18 26.340593523104182 22.539614596222137 29.823183609709808 21.296608270963873 19 30.047781550454683 23.97588376931512 24.7470772075966 21.229257472633602 20 31.341095527728342 24.091648536736912 23.914714237887306 20.65254169764744 21 27.312160052651528 25.269519315387175 26.436349565292577 20.981971066668713 22 26.442959590592896 23.30512698573199 25.553464564368962 24.698448859306147 23 24.575823957518615 26.64154618853436 25.459280636306048 23.323349217640978 24 24.627775183392473 23.670536330306895 31.114460984593638 20.587227501706995 25 23.473736225689844 23.675359862282804 29.23056804413639 23.62033586789096 26 22.01084830206315 27.806589945115352 26.46454042995178 23.718021322869724 27 22.419597974688248 26.33562707166232 27.91306494725021 23.33171000639922 28 21.111777671620374 25.931200712882298 31.305401391106624 21.651620224390708 29 22.49970433535481 24.54330977901435 30.547892491690128 22.409093393940715 30 24.14031261489385 25.22389227588173 29.14049305071962 21.495302058504798 31 28.211766631091628 24.5955825736866 25.22657201586835 21.966078779353428 32 29.42972631994166 24.68901617455326 25.042849042385985 20.838408463119094 33 27.96512336272353 24.705130344339445 25.130351485415602 22.199394807521422 34 23.15788420593409 25.432018748175544 28.858655863860633 22.551441182029734 35 23.769579520212204 25.77820542457979 28.415676979139832 22.036538076068172 36 28.698514602260484 26.239299351610114 24.79845675560664 20.26372929052276 37 25.16254409512148 28.46952188793756 25.40039781633348 20.96753620060748 38 24.355227761820423 28.682650541539722 24.35308396983113 22.609037726808726 39 24.997936600210306 27.70647485921539 24.560102816263807 22.735485724310493 40 25.593446284969268 24.496503653914797 25.316361170353215 24.59368889076272 41 21.909482670836102 24.06556573420052 25.94552838934407 28.079423205619307 42 23.86640745839525 25.265517570340496 24.877526950145047 25.99054802111921 43 23.871695478635505 25.17880118437362 26.05914936477657 24.890353972214314 44 23.41103031000304 26.754702675702514 26.95035942459194 22.88390758970251 45 21.963899257497644 28.19415180691294 25.10437587247868 24.737573063110734 46 23.343929620738184 27.09206407508417 26.463289884624686 23.100716419552956 47 23.593967226422667 25.429267548455954 27.7585690045552 23.21819622056618 48 24.704415747009676 23.590001211242473 28.187720430945067 23.51786261080278 49 23.273184485091537 23.327422422420636 29.169255593242628 24.23013749924521 50 21.653871205979463 27.90645492194989 26.617249879322376 23.822423992748266 51 21.976083141970122 28.463876569032426 25.398754242475025 24.161286046522427 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 791.0 1 2148.5 2 3506.0 3 11884.0 4 20262.0 5 14652.5 6 9043.0 7 8981.0 8 8919.0 9 9189.0 10 9459.0 11 9509.5 12 9560.0 13 9393.0 14 9226.0 15 9110.0 16 8994.0 17 8986.5 18 8979.0 19 8585.5 20 8192.0 21 9174.5 22 10157.0 23 10343.0 24 10529.0 25 11877.5 26 16286.5 27 19347.0 28 20532.5 29 21718.0 30 27134.5 31 32551.0 32 38111.5 33 43672.0 34 51502.0 35 59332.0 36 64003.0 37 68674.0 38 79355.5 39 90037.0 40 111680.0 41 133323.0 42 154595.0 43 175867.0 44 183036.0 45 190205.0 46 195479.0 47 200753.0 48 197605.5 49 194458.0 50 199015.0 51 203572.0 52 195575.0 53 187578.0 54 177826.5 55 168075.0 56 164265.5 57 160456.0 58 156415.5 59 152375.0 60 147256.5 61 142138.0 62 131610.0 63 121082.0 64 105632.0 65 90182.0 66 79317.0 67 68452.0 68 60547.0 69 52642.0 70 43326.5 71 34011.0 72 28823.0 73 23635.0 74 19465.0 75 11984.0 76 8673.0 77 6868.0 78 5063.0 79 3906.5 80 2750.0 81 1901.5 82 1053.0 83 817.0 84 581.0 85 402.0 86 223.0 87 152.5 88 82.0 89 66.5 90 51.0 91 34.0 92 17.0 93 12.0 94 7.0 95 5.5 96 4.0 97 3.0 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2798779.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.975425936787207 #Duplication Level Percentage of deduplicated Percentage of total 1 78.51232319184479 14.898047738519512 2 6.982027185198304 2.649738794827306 3 2.280484147841165 1.2981947414213195 4 1.189280527192027 0.9026841824718221 5 0.7604478077696171 0.7214910527562282 6 0.6206798102418107 0.706659826182157 7 0.44521541715877844 0.5913706521948554 8 0.3767378507904507 0.571900894820687 9 0.3179640300362555 0.5430152612263814 >10 5.198090148216421 25.858531144648616 >50 2.7684670845270953 37.25775097061293 >100 0.5452389300343695 13.117736703793046 >500 0.0019024182180860949 0.21627028322454153 >1k 9.512091090430474E-4 0.29532752246035293 >5k 0.0 0.0 >10k+ 1.902418218086095E-4 0.3712802308403288 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 10285 0.3674816768312182 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 3773 0.1348087862600084 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.026690210266691296 0.0 2 0.0 0.0 0.0 0.08882444808968483 0.0 3 0.0 0.0 0.0 0.14856478485796842 0.0 4 0.0 0.0 0.0 0.2421770350570731 0.0 5 0.0 0.0 0.0 0.4169318120508979 0.0 6 0.0 0.0 0.0 0.7367141171203585 0.0 7 0.0 0.0 0.0 0.920008332204865 0.0 8 0.0 0.0 0.0 1.3474089951368078 0.0 9 0.0 0.0 0.0 1.5972322216223576 0.0 10 0.0 0.0 0.0 1.9022223619657 0.0 11 0.0 0.0 0.0 2.190240815727144 0.0 12 0.0 0.0 0.0 2.416053571932618 0.0 13 0.0 0.0 0.0 2.534533809207515 0.0 14 0.0 0.0 0.0 2.5966323171640204 0.0 15 0.0 0.0 0.0 2.6617321339055353 0.0 16 0.0 0.0 0.0 2.7781757687906046 0.0 17 0.0 0.0 0.0 2.904230737761002 0.0 18 0.0 0.0 0.0 3.0681593652089 3.2156879839387103E-4 19 0.0 0.0 0.0 3.162843511402651 3.2156879839387103E-4 20 0.0 0.0 0.0 3.2660670956870836 3.2156879839387103E-4 21 0.0 0.0 0.0 3.391907685458552 3.2156879839387103E-4 22 0.0 0.0 0.0 3.531647193293933 3.2156879839387103E-4 23 0.0 0.0 0.0 3.688251198111748 3.2156879839387103E-4 24 0.0 0.0 0.0 3.8148063852129805 3.2156879839387103E-4 25 0.0 0.0 0.0 3.9210670081489107 3.2156879839387103E-4 26 0.0 0.0 0.0 4.0297215321395505 3.2156879839387103E-4 27 0.0 0.0 0.0 4.142842289441217 3.2156879839387103E-4 28 0.0 0.0 0.0 4.256999212871041 3.2156879839387103E-4 29 0.0 0.0 0.0 4.376944374671955 3.2156879839387103E-4 30 0.0 0.0 0.0 4.541909168248011 3.2156879839387103E-4 31 3.5729866488207895E-5 0.0 0.0 4.678647367298383 3.2156879839387103E-4 32 3.5729866488207895E-5 0.0 0.0 4.824675331635688 3.2156879839387103E-4 33 3.5729866488207895E-5 0.0 0.0 4.966773010659291 3.2156879839387103E-4 34 3.5729866488207895E-5 0.0 0.0 5.113694221658802 3.2156879839387103E-4 35 3.5729866488207895E-5 0.0 0.0 5.286912614393634 3.2156879839387103E-4 36 3.5729866488207895E-5 0.0 0.0 5.441265637622692 3.2156879839387103E-4 37 3.5729866488207895E-5 0.0 0.0 5.596333258181514 3.2156879839387103E-4 38 3.5729866488207895E-5 0.0 0.0 5.7881669113567025 3.2156879839387103E-4 39 3.5729866488207895E-5 0.0 0.0 6.06971825928378 3.2156879839387103E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGATAC 190 0.0 43.81579 9 CGTTTTT 7830 0.0 39.971264 1 CATACGA 335 0.0 39.626865 18 TCGATAG 145 0.0 38.793106 1 TACGGGA 560 0.0 38.57143 4 CGTAAGG 480 0.0 38.437504 2 TAACGAC 30 1.1403405E-4 37.500004 19 GGCGATA 1615 0.0 37.19814 8 CTATACG 55 2.752131E-9 36.81818 1 ACACGAC 785 0.0 36.6879 26 GGGCGAT 7055 0.0 36.42098 7 AACGTAG 150 0.0 36.000004 1 CGCAACT 25 0.002107624 36.0 33 CACGACC 815 0.0 35.889572 27 TATGGGC 1350 0.0 35.666668 4 CGATACG 95 0.0 35.526314 10 ATACTAT 1305 0.0 35.517242 45 ACGACCA 825 0.0 35.454548 28 GCGATAT 470 0.0 35.425533 9 ACATACG 375 0.0 35.399998 17 >>END_MODULE