##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545346_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2921859 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.29203770613161 31.0 31.0 33.0 30.0 34.0 2 31.665261054691552 31.0 31.0 34.0 30.0 34.0 3 31.844033199411744 31.0 31.0 34.0 30.0 34.0 4 35.62276413748918 37.0 35.0 37.0 33.0 37.0 5 35.545148140276446 37.0 35.0 37.0 33.0 37.0 6 35.591943690643525 37.0 35.0 37.0 33.0 37.0 7 35.9280375952433 37.0 35.0 37.0 35.0 37.0 8 35.97778708691966 37.0 35.0 37.0 35.0 37.0 9 37.878103974216415 39.0 38.0 39.0 35.0 39.0 10 37.25702848768541 39.0 37.0 39.0 34.0 39.0 11 36.87765357602814 39.0 37.0 39.0 33.0 39.0 12 36.09772579717228 37.0 35.0 39.0 32.0 39.0 13 35.74675335120552 37.0 35.0 39.0 31.0 39.0 14 36.71917296488297 38.0 35.0 41.0 31.0 41.0 15 36.993015063355216 38.0 35.0 41.0 32.0 41.0 16 37.11094854337598 38.0 35.0 41.0 32.0 41.0 17 37.038912213080785 38.0 35.0 41.0 32.0 41.0 18 36.99002415927668 38.0 35.0 41.0 32.0 41.0 19 36.97597146200415 38.0 35.0 41.0 32.0 41.0 20 36.84341989124047 38.0 35.0 41.0 32.0 41.0 21 36.718250949138884 38.0 35.0 41.0 31.0 41.0 22 36.59609036575687 38.0 35.0 40.0 31.0 41.0 23 36.531192299149275 38.0 35.0 40.0 31.0 41.0 24 36.4317556049077 38.0 35.0 40.0 31.0 41.0 25 36.325748093936085 38.0 35.0 40.0 31.0 41.0 26 36.17251482703306 38.0 35.0 40.0 31.0 41.0 27 36.046103182939355 38.0 35.0 40.0 30.0 41.0 28 35.990688120131736 37.0 35.0 40.0 30.0 41.0 29 36.144728407496736 38.0 35.0 40.0 30.0 41.0 30 36.143904959137316 38.0 35.0 40.0 30.0 41.0 31 36.03423813400989 38.0 35.0 40.0 30.0 41.0 32 35.90821494124118 38.0 35.0 40.0 30.0 41.0 33 35.73878616319268 37.0 34.0 40.0 30.0 41.0 34 35.62629373970476 37.0 34.0 40.0 29.0 41.0 35 35.51153118613869 37.0 34.0 40.0 29.0 41.0 36 35.340324430439665 37.0 34.0 40.0 28.0 41.0 37 35.23683894397368 37.0 34.0 40.0 27.0 41.0 38 35.178988103122016 37.0 34.0 40.0 28.0 41.0 39 35.15250804368041 37.0 34.0 40.0 27.0 41.0 40 34.99667232402385 36.0 34.0 40.0 27.0 41.0 41 34.95788126668672 36.0 34.0 40.0 27.0 41.0 42 34.90944771804526 36.0 34.0 40.0 27.0 41.0 43 34.778040281889034 36.0 33.0 40.0 27.0 41.0 44 34.681370661623305 36.0 34.0 40.0 26.0 41.0 45 34.640191398695144 36.0 34.0 40.0 26.0 41.0 46 34.64186191051656 35.0 34.0 40.0 26.0 41.0 47 34.626059984414034 35.0 34.0 40.0 26.0 41.0 48 34.57496922336088 35.0 34.0 40.0 26.0 41.0 49 34.56295871908946 36.0 34.0 40.0 26.0 41.0 50 34.41947198684125 35.0 34.0 40.0 26.0 41.0 51 34.18033347947317 35.0 33.0 39.0 25.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 3.0 10 3.0 11 7.0 12 7.0 13 9.0 14 18.0 15 57.0 16 192.0 17 460.0 18 1090.0 19 2168.0 20 3911.0 21 6222.0 22 9456.0 23 13949.0 24 19980.0 25 28449.0 26 37996.0 27 45701.0 28 52434.0 29 61652.0 30 75564.0 31 93515.0 32 119112.0 33 158443.0 34 280850.0 35 412219.0 36 215099.0 37 266800.0 38 383317.0 39 632841.0 40 334.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.67205604377213 24.00855072061999 29.146512545608804 13.172880689999072 2 30.161859282052966 25.86432131050814 30.73139395159041 13.242425455848487 3 29.070875767790298 26.420268739867325 30.629575212219347 13.879280280123032 4 25.982875970401036 28.811383437736044 30.16627427949124 15.039466312371678 5 23.525057163949388 33.011996814356884 28.775413187289324 14.687532834404399 6 22.311856937655104 41.18846939568268 25.365529274342123 11.134144392320094 7 89.8701477381352 3.7702024635685705 4.916287883843813 1.4433619144524086 8 90.95373869854774 2.746470654470322 4.4835496853202015 1.8162409616617365 9 86.30005760031541 4.663161364049395 6.333296712811946 2.7034843228232437 10 50.45606239041651 26.3114339192959 11.994795094492924 11.237708595794665 11 42.556913252829794 21.8445174801385 20.864114250550763 14.734455016480947 12 38.12487187095613 22.081079203342803 24.208286573718993 15.585762351982076 13 22.588872358317087 36.011730887767 25.229793771704934 16.169602982210982 14 17.89566163185835 38.59816644129645 27.03912132652534 16.467050600319865 15 17.46692773333689 23.797315339309666 43.146606321523386 15.589150605830055 16 19.591431345591968 19.584483713964296 41.481057094130826 19.343027846312914 17 19.605668856710746 20.11404383305286 27.974176714208316 32.30611059602808 18 23.671025877703205 23.742042309365374 30.93708491751313 21.649846895418293 19 29.727957440793684 24.983957131401617 24.269720065205064 21.018365362599635 20 32.308951253294566 23.50674690325577 23.43124702458264 20.753054818867028 21 25.621872924052802 26.82333404863137 26.245893453448645 21.308899573867183 22 24.958459665575923 24.672237777387615 24.86283561253298 25.50646694450348 23 22.91411050293666 30.051381671737072 23.740023046971125 23.29448477835515 24 22.700068689146192 24.55019218928771 33.70166048395901 19.048078637607084 25 20.789949138545015 25.019858932275653 31.7960243803688 22.394167548810533 26 19.8830607500225 32.02611761895424 26.18497333375772 21.905848297265543 27 21.454457590184877 30.534327631826173 27.032584392333785 20.97863038565516 28 17.97605565497856 28.68841378040487 34.45652237154497 18.879008193071602 29 19.319412743736095 24.59300739700307 33.81224076863394 22.275339090626893 30 21.131341382318585 27.55502575586296 30.104053617919273 21.209579243899178 31 27.494858581471593 26.14027576279348 23.533544910962505 22.83132074477242 32 29.06978057462732 26.71922224857531 24.649341395324004 19.56165578147337 33 26.647897793836044 27.261650887328926 24.914959962133697 21.175491356701333 34 21.010322537808975 27.21339393858499 27.96911144582952 23.80717207777651 35 21.505281397904554 25.687516064259093 29.36093083204905 23.446271705787307 36 28.542889988873522 25.58651871976026 25.226131719566208 20.64445957180001 37 23.062372277375466 29.904625787897366 26.89890237687719 20.134099557849986 38 22.221708850427074 30.926920155969196 23.72335557602198 23.12801541758175 39 22.109246202503268 30.500992689927887 25.809322078854592 21.580439028714256 40 24.856161779196054 26.246851747466255 24.780490776591204 24.11649569674649 41 19.034422947856143 24.935049911717165 26.198902821799408 29.831624318627288 42 23.145264709898733 27.27831835827807 23.8594333265226 25.716983605300598 43 23.012164515809967 27.182899653953186 25.322645617054075 24.48229021318277 44 21.997194252015582 29.56333621848282 26.376769036425095 22.0627004930765 45 20.239888372436862 31.857355197495842 23.496616366498177 24.40614006356912 46 22.873383007188234 30.138073055544435 25.558112147095397 21.43043179017194 47 23.390861776697644 26.30975690476508 26.869092587972247 23.430288730565028 48 23.8553948017341 22.458270573631374 29.416580334643115 24.269754289991404 49 21.528417353472566 24.02080319413086 29.656735660413457 24.794043791983118 50 20.5713554281709 29.777583380991345 26.33388537913705 23.317175811700704 51 20.14214238264064 31.579586831534307 23.98866611975458 24.28960466607047 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 727.0 1 1737.0 2 2747.0 3 8356.5 4 13966.0 5 10528.0 6 7090.0 7 7235.5 8 7381.0 9 7836.5 10 8292.0 11 8663.5 12 9035.0 13 8597.0 14 8159.0 15 8221.0 16 8283.0 17 7709.0 18 7135.0 19 7337.0 20 7539.0 21 8639.5 22 9740.0 23 10011.5 24 10283.0 25 12767.5 26 16857.5 27 18463.0 28 22064.5 29 25666.0 30 32701.5 31 39737.0 32 45310.5 33 50884.0 34 58635.5 35 66387.0 36 70432.0 37 74477.0 38 91787.5 39 109098.0 40 143066.5 41 177035.0 42 214300.5 43 251566.0 44 263415.0 45 275264.0 46 267858.0 47 260452.0 48 246883.0 49 233314.0 50 223278.5 51 213243.0 52 204119.0 53 194995.0 54 180197.0 55 165399.0 56 154062.0 57 142725.0 58 133563.5 59 124402.0 60 116750.5 61 109099.0 62 98271.5 63 87444.0 64 74268.0 65 61092.0 66 49531.5 67 37971.0 68 33408.0 69 28845.0 70 25280.0 71 21715.0 72 18510.0 73 15305.0 74 12672.5 75 8194.5 76 6349.0 77 4636.0 78 2923.0 79 2104.0 80 1285.0 81 908.5 82 532.0 83 409.0 84 286.0 85 195.0 86 104.0 87 94.5 88 85.0 89 61.0 90 37.0 91 22.5 92 8.0 93 4.5 94 1.0 95 1.5 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2921859.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.671645692546143 #Duplication Level Percentage of deduplicated Percentage of total 1 78.92967653577972 13.158876018317923 2 8.206465944712695 2.7363058523639205 3 2.631808721848214 1.3162974762361845 4 1.2380048265300945 0.8255831133428713 5 0.7415156866203974 0.6181143401400172 6 0.5124519755154464 0.5126050662143312 7 0.3660796696331533 0.4272205383157792 8 0.3094298184484098 0.4126963439904613 9 0.24564696997274885 0.368580532394987 >10 3.2117454578880795 13.530336337984739 >50 1.7918713328115028 21.930614886335796 >100 1.8103228060905956 43.15773764980143 >500 0.004357722380349302 0.508276061419535 >1k 2.0751058954044296E-4 0.04632328112175043 >5k 4.150211790808859E-4 0.45043250202030666 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7020 0.2402580001293697 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 6000 0.2053487180592903 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.034224786343215054 0.0 2 0.0 0.0 0.0 0.12204558809990489 0.0 3 0.0 0.0 0.0 0.1884416736057421 0.0 4 0.0 0.0 0.0 0.34820297625587 0.0 5 0.0 0.0 0.0 0.6035541071625975 0.0 6 0.0 0.0 0.0 1.0034365107967222 0.0 7 0.0 0.0 0.0 1.2138847220211515 0.0 8 0.0 0.0 0.0 1.7969724069505064 0.0 9 0.0 0.0 0.0 2.0633439190597493 0.0 10 0.0 0.0 0.0 2.421677432073211 0.0 11 0.0 0.0 0.0 2.76635525533573 0.0 12 0.0 0.0 0.0 3.065308764043713 0.0 13 0.0 0.0 0.0 3.1980667102690443 0.0 14 0.0 0.0 0.0 3.2511151291010276 0.0 15 0.0 0.0 0.0 3.3165871453755984 0.0 16 0.0 0.0 0.0 3.458311985622852 0.0 17 0.0 0.0 0.0 3.621221968616555 3.422478634321505E-5 18 0.0 0.0 0.0 3.831978202918074 3.422478634321505E-5 19 0.0 0.0 0.0 3.950122165374852 3.422478634321505E-5 20 6.84495726864301E-5 0.0 0.0 4.078670462879968 3.422478634321505E-5 21 6.84495726864301E-5 0.0 0.0 4.244455327926501 3.422478634321505E-5 22 6.84495726864301E-5 0.0 0.0 4.415921507506009 3.422478634321505E-5 23 6.84495726864301E-5 0.0 0.0 4.612166432398004 3.422478634321505E-5 24 6.84495726864301E-5 0.0 0.0 4.759333013673829 3.422478634321505E-5 25 6.84495726864301E-5 0.0 0.0 4.879564688097544 3.422478634321505E-5 26 6.84495726864301E-5 0.0 0.0 4.999899036880287 3.422478634321505E-5 27 6.84495726864301E-5 0.0 0.0 5.12074675745818 3.422478634321505E-5 28 6.84495726864301E-5 0.0 0.0 5.245872576328974 3.422478634321505E-5 29 6.84495726864301E-5 0.0 0.0 5.385749278113694 3.422478634321505E-5 30 6.84495726864301E-5 0.0 0.0 5.5645395619706495 3.422478634321505E-5 31 6.84495726864301E-5 0.0 0.0 5.72539605778376 3.422478634321505E-5 32 6.84495726864301E-5 0.0 0.0 5.8778674809427836 3.422478634321505E-5 33 6.84495726864301E-5 0.0 0.0 6.028559215211959 3.422478634321505E-5 34 6.84495726864301E-5 0.0 0.0 6.19037400504268 3.422478634321505E-5 35 6.84495726864301E-5 0.0 0.0 6.38155366155588 3.422478634321505E-5 36 6.84495726864301E-5 0.0 0.0 6.556716118060454 3.422478634321505E-5 37 6.84495726864301E-5 0.0 0.0 6.735027254908604 3.422478634321505E-5 38 6.84495726864301E-5 0.0 0.0 6.910121261840493 3.422478634321505E-5 39 6.84495726864301E-5 0.0 0.0 7.090006738860431 3.422478634321505E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGTCTA 35 1.212793E-7 45.000004 31 CTATCGA 45 3.8562575E-10 45.0 14 TAGTTCG 25 3.8922888E-5 45.0 1 TCGCTAA 25 3.8922888E-5 45.0 37 TACGACG 60 3.6379788E-12 41.250004 1 CTATACG 110 0.0 40.909092 1 TCGTACA 50 1.0822987E-9 40.5 41 CTATGCG 45 1.9301297E-8 40.0 1 CGTTTTT 6480 0.0 39.791668 1 CGTAAGG 450 0.0 39.5 2 ACACGTC 40 3.4606637E-7 39.375 12 TACGGGT 255 0.0 38.82353 4 TACGGGA 1105 0.0 38.687786 4 AGGGCGA 3780 0.0 38.630955 6 CGACGAA 35 6.2515974E-6 38.57143 2 CCTAACG 35 6.2515974E-6 38.57143 42 ATCGGCA 35 6.2515974E-6 38.57143 39 GGGCGAT 6975 0.0 38.129032 7 CTACGGG 605 0.0 37.933887 3 TAACACG 95 0.0 37.894737 1 >>END_MODULE