##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545345_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 4171849 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.261050435909834 31.0 31.0 33.0 30.0 34.0 2 31.629372012266025 31.0 31.0 34.0 30.0 34.0 3 31.793481739152114 31.0 31.0 34.0 30.0 34.0 4 35.58536730356252 37.0 35.0 37.0 33.0 37.0 5 35.51307298034996 37.0 35.0 37.0 33.0 37.0 6 35.581007605979984 37.0 35.0 37.0 33.0 37.0 7 35.93886787369342 37.0 35.0 37.0 35.0 37.0 8 35.994777855094945 37.0 35.0 37.0 35.0 37.0 9 37.909447106067354 39.0 38.0 39.0 35.0 39.0 10 37.20085913943674 39.0 37.0 39.0 33.0 39.0 11 36.88761841571927 39.0 37.0 39.0 33.0 39.0 12 36.24958837196648 38.0 35.0 39.0 32.0 39.0 13 35.99458825091704 38.0 35.0 39.0 32.0 39.0 14 37.00236154280752 39.0 35.0 41.0 32.0 41.0 15 37.231440543509606 39.0 35.0 41.0 32.0 41.0 16 37.30746007345903 39.0 35.0 41.0 32.0 41.0 17 37.24871993209725 39.0 35.0 41.0 32.0 41.0 18 37.183385832037544 39.0 35.0 41.0 32.0 41.0 19 37.1579774339867 38.0 35.0 41.0 32.0 41.0 20 37.02756451635714 38.0 35.0 41.0 32.0 41.0 21 36.926302701751666 38.0 35.0 41.0 32.0 41.0 22 36.83127457393592 38.0 35.0 41.0 31.0 41.0 23 36.75571143634393 38.0 35.0 41.0 31.0 41.0 24 36.66859083346497 38.0 35.0 40.0 31.0 41.0 25 36.58192278771355 38.0 35.0 40.0 31.0 41.0 26 36.4659241022386 38.0 35.0 40.0 31.0 41.0 27 36.34794955426239 38.0 35.0 40.0 31.0 41.0 28 36.29846334323222 38.0 35.0 40.0 31.0 41.0 29 36.415950097906226 38.0 35.0 40.0 31.0 41.0 30 36.38417689614365 38.0 35.0 40.0 31.0 41.0 31 36.2784328963009 38.0 35.0 40.0 30.0 41.0 32 36.132734190523195 38.0 35.0 40.0 30.0 41.0 33 35.94013661568288 38.0 35.0 40.0 30.0 41.0 34 35.78174138133954 38.0 35.0 40.0 29.0 41.0 35 35.63845719248228 38.0 34.0 40.0 29.0 41.0 36 35.49972973614337 38.0 34.0 40.0 28.0 41.0 37 35.38977465387649 38.0 34.0 40.0 27.0 41.0 38 35.355693123121185 38.0 34.0 40.0 27.0 41.0 39 35.326293688961414 38.0 34.0 40.0 27.0 41.0 40 35.21187511820298 38.0 34.0 40.0 27.0 41.0 41 35.16700964009004 37.0 34.0 40.0 27.0 41.0 42 35.110295219218145 37.0 34.0 40.0 27.0 41.0 43 35.00943202881984 37.0 34.0 40.0 27.0 41.0 44 34.9048774296481 37.0 34.0 40.0 26.0 41.0 45 34.86964125499269 37.0 34.0 40.0 26.0 41.0 46 34.889162095751786 37.0 34.0 40.0 26.0 41.0 47 34.86519071040203 37.0 34.0 40.0 26.0 41.0 48 34.793790714860485 37.0 34.0 40.0 26.0 41.0 49 34.770895111496124 36.0 34.0 40.0 26.0 41.0 50 34.65213889572705 36.0 34.0 40.0 26.0 41.0 51 34.41877043008987 36.0 33.0 40.0 25.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 4.0 11 2.0 12 3.0 13 7.0 14 23.0 15 82.0 16 211.0 17 573.0 18 1336.0 19 2822.0 20 4973.0 21 8109.0 22 12776.0 23 19210.0 24 29027.0 25 42704.0 26 56145.0 27 65609.0 28 71796.0 29 83399.0 30 101158.0 31 127635.0 32 162148.0 33 214074.0 34 362782.0 35 526099.0 36 310541.0 37 394011.0 38 578745.0 39 995406.0 40 437.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.47527678973999 23.561615005720483 29.483905098195066 13.479203106344453 2 30.204808467420563 25.770012289514792 30.672706514545467 13.352472728519176 3 28.74917093116266 25.304726992755487 31.728137811315797 14.217964264766056 4 25.158916346205245 28.015419541790703 31.66703780505958 15.158626306944475 5 23.11044814901019 32.86118457307539 30.30215139617949 13.726215881734932 6 20.6307802607429 42.17621491094236 26.51663566922005 10.676369159094683 7 89.47739958948658 3.5397254310978177 5.639801440560289 1.3430735388553132 8 91.34896780779937 2.194135022624261 4.902814075964878 1.5540830936114898 9 86.45770736189158 4.221916948576039 6.985128176978601 2.3352475125537864 10 45.639978819942904 23.54816773090301 17.01720268398976 13.794650765164318 11 38.90984549057265 24.772061500787782 20.315596273978276 16.0024967346613 12 33.3385748141891 22.518768057041374 27.416668244703967 16.725988884065554 13 21.83451510349488 34.98352888611261 27.362184010015707 15.819772000376812 14 18.72016460806707 36.75224103269318 28.689868688919468 15.837725670320282 15 17.39382225962637 25.37630197066097 41.40504605991253 15.82482970980014 16 18.8247465332518 21.352115093331516 40.35388145639979 19.469256917016892 17 19.508639933995696 22.369218061344025 28.574644000777592 29.547498003882687 18 22.423582445098084 24.777838315816318 32.006024187356736 20.79255505172886 19 27.530718393690663 26.332328902604097 25.564012503808264 20.572940199896976 20 29.02626629103786 24.865425378531196 25.781733710879756 20.326574619551188 21 23.349838404985416 27.92251109759725 27.559602468833365 21.168048028583968 22 23.763012515553655 25.997393481882973 25.93286573890857 24.306728263654797 23 20.707892351808514 31.01212436020575 25.22982015887919 23.050163129106544 24 21.335216111609025 26.54652649221005 33.73554507845322 18.382712317727705 25 19.396866952758838 27.466118740155743 31.722768489463544 21.414245817621875 26 19.450368409786645 31.63748256468535 27.694698441865945 21.217450583662064 27 20.08212665415263 30.68279796320528 27.880731061934412 21.35434432070768 28 18.431755320003194 28.681598974459526 33.53932512897758 19.3473205765597 29 18.764869006524446 25.26992228146321 33.835500757577755 22.129707954434593 30 20.491801117442172 28.782417580310316 30.204904348167922 20.520876954079593 31 25.798369020547003 27.432896061194928 25.63601894507687 21.132715973181195 32 26.31346436556069 27.499988614161254 26.142508993014847 20.044038027263213 33 25.4367547818725 27.87260516859551 25.630505802103578 21.06013424742842 34 20.829780751892027 27.427550709529513 28.644013721493756 23.0986548170847 35 21.1214499853662 27.0594645204081 29.454086185765593 22.36499930846011 36 28.215211049105566 25.6918455102282 25.898468520792576 20.19447491987366 37 21.64114760625325 30.24227386945213 27.58513071781841 20.531447806476216 38 21.895998632740543 30.845699352972744 25.062004880809447 22.196297133477266 39 21.663080327212224 29.87536221948589 26.322884648988975 22.138672804312908 40 23.493923198083152 26.751807172311366 25.32148215335694 24.432787476248542 41 19.849663782174282 25.558091867658682 27.121187751522168 27.47105659864487 42 21.854793881561868 28.11094073634976 24.898048802821005 25.136216579267373 43 22.18958548116195 27.969996037728116 26.516731549967414 23.32368693114252 44 21.258295782038132 29.84865943134567 26.964710371827938 21.928334414788264 45 19.57585233789622 32.17789042700251 24.571431036933504 23.674826198167768 46 22.42140115809561 30.210129848899133 26.65599833551023 20.712470657495032 47 22.19586567011414 27.45763329401424 27.293149871915308 23.053351163956318 48 23.173705472082045 25.122026228657845 28.600819444807325 23.103448854452786 49 21.36910995580137 24.939109732878634 30.083782994063302 23.607997317256686 50 20.55170261435637 30.161182727371006 26.924248696441317 22.362865961831314 51 19.929868027342312 30.97233385005066 25.244322121917644 23.853476000689383 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 722.0 1 1686.5 2 2651.0 3 11456.0 4 20261.0 5 15745.0 6 11229.0 7 11671.0 8 12113.0 9 13279.0 10 14445.0 11 14450.0 12 14455.0 13 14346.0 14 14237.0 15 13798.5 16 13360.0 17 13509.5 18 13659.0 19 13581.0 20 13503.0 21 14590.0 22 15677.0 23 16477.5 24 17278.0 25 22146.5 26 29410.0 27 31805.0 28 37363.0 29 42921.0 30 54677.0 31 66433.0 32 78758.0 33 91083.0 34 108597.5 35 126112.0 36 137666.5 37 149221.0 38 169821.0 39 190421.0 40 232282.5 41 274144.0 42 314569.5 43 354995.0 44 357258.0 45 359521.0 46 354151.5 47 348782.0 48 345968.5 49 343155.0 50 344380.0 51 345605.0 52 326158.0 53 306711.0 54 267438.0 55 228165.0 56 205789.0 57 183413.0 58 165698.0 59 147983.0 60 133363.0 61 118743.0 62 103659.5 63 88576.0 64 77752.0 65 66928.0 66 54253.5 67 41579.0 68 33471.5 69 25364.0 70 22304.0 71 19244.0 72 15950.5 73 12657.0 74 10167.5 75 6147.0 76 4616.0 77 3536.5 78 2457.0 79 2044.5 80 1632.0 81 1138.5 82 645.0 83 491.5 84 338.0 85 254.0 86 170.0 87 145.5 88 121.0 89 69.0 90 17.0 91 12.0 92 7.0 93 4.5 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 4171849.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.932123168075243 #Duplication Level Percentage of deduplicated Percentage of total 1 78.3086869213699 14.042410190042478 2 8.614311481384968 3.0894578898471985 3 2.8335897063525617 1.5243683886631287 4 1.3878343267955704 0.9954726433992382 5 0.8614098911116169 0.7723454132805898 6 0.5854947556608382 0.6299498443663363 7 0.42603054366964177 0.5347742527712253 8 0.3403797258047975 0.48829849336378467 9 0.28089874655653385 0.4533399828908745 >10 3.3556884887988603 14.234926138150323 >50 1.4367715293101215 18.88599253785169 >100 1.5625619865014553 43.14483866127402 >500 0.005397358879237 0.6133093458196551 >1k 6.74669859904625E-4 0.155365893774727 >5k 1.34933971980925E-4 0.18849093793881377 >10k+ 1.34933971980925E-4 0.246659386565888 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 10194 0.24435208465119423 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 7790 0.18672775548683568 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.03935904679196203 0.0 2 0.0 0.0 0.0 0.11846066336533273 0.0 3 0.0 0.0 0.0 0.18878919155511142 0.0 4 0.0 0.0 0.0 0.3274327522400739 0.0 5 0.0 0.0 0.0 0.5608784018788792 0.0 6 0.0 0.0 0.0 0.9527190461591492 0.0 7 0.0 0.0 0.0 1.1629855251232726 0.0 8 0.0 0.0 0.0 1.7125979391871566 0.0 9 0.0 0.0 0.0 1.9804168367551174 0.0 10 0.0 0.0 0.0 2.3493899227896313 0.0 11 0.0 0.0 0.0 2.7050595551277143 0.0 12 0.0 0.0 0.0 3.0069400881959054 0.0 13 0.0 0.0 0.0 3.1492031470937705 0.0 14 0.0 0.0 0.0 3.2122207682972226 0.0 15 0.0 0.0 0.0 3.2843710306868727 0.0 16 0.0 0.0 0.0 3.439146527115435 0.0 17 0.0 0.0 0.0 3.6312915448282044 0.0 18 0.0 0.0 0.0 3.8735582232242827 0.0 19 0.0 0.0 0.0 4.013759846053872 0.0 20 0.0 0.0 0.0 4.168559312669275 0.0 21 0.0 0.0 0.0 4.3699088821287635 0.0 22 0.0 0.0 0.0 4.581877244358557 0.0 23 0.0 0.0 0.0 4.825797865646623 0.0 24 0.0 0.0 0.0 5.007851434699578 0.0 25 0.0 0.0 0.0 5.162483110007098 0.0 26 0.0 0.0 0.0 5.310594894494024 0.0 27 0.0 0.0 0.0 5.4608160554229075 0.0 28 0.0 0.0 0.0 5.631052322363537 0.0 29 0.0 0.0 0.0 5.816102164771544 0.0 30 0.0 0.0 0.0 6.038473588090077 0.0 31 0.0 0.0 0.0 6.237186436997121 0.0 32 0.0 0.0 0.0 6.427317959015295 0.0 33 0.0 0.0 0.0 6.618384318320246 0.0 34 0.0 0.0 0.0 6.822346638145341 0.0 35 0.0 0.0 0.0 7.056151840586752 0.0 36 0.0 0.0 0.0 7.270061787950619 0.0 37 0.0 0.0 0.0 7.495021991447917 0.0 38 0.0 0.0 0.0 7.716266815984951 0.0 39 0.0 0.0 0.0 7.942281707703227 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGTATC 20 7.035422E-4 45.000004 11 ACCGTAC 25 3.892577E-5 45.0 41 CGTTTTT 12160 0.0 42.520557 1 CGTAAGG 685 0.0 40.401463 2 GTTAGCG 290 0.0 39.56897 1 ACGGGTA 725 0.0 39.413795 5 GCGATCG 80 0.0 39.375004 9 TCGAACG 75 0.0 39.0 1 CGACGGT 230 0.0 38.152172 28 TACGGGA 1095 0.0 37.80822 4 AGGGCGA 4735 0.0 37.63464 6 GCGTAAG 325 0.0 37.384617 1 TACGGGT 560 0.0 37.36607 4 CGTTGAT 545 0.0 37.155964 25 TAGGGCG 2050 0.0 37.097557 5 GGCGATA 1875 0.0 37.079998 8 TAGGGTA 3055 0.0 36.898525 5 CGGGTAT 685 0.0 36.788322 6 ACGTAGG 775 0.0 36.580647 2 CTTGCGT 105 0.0 36.428574 15 >>END_MODULE