##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545343_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1327221 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.217788145305114 31.0 31.0 33.0 30.0 33.0 2 31.592196024625892 31.0 31.0 34.0 30.0 34.0 3 31.75474544179153 31.0 31.0 34.0 30.0 34.0 4 35.5660888427775 37.0 35.0 37.0 33.0 37.0 5 35.49431556613405 37.0 35.0 37.0 33.0 37.0 6 35.54678233692806 37.0 35.0 37.0 33.0 37.0 7 35.84115456280453 37.0 35.0 37.0 35.0 37.0 8 35.8692945636032 37.0 35.0 37.0 35.0 37.0 9 37.74673923935803 39.0 37.0 39.0 35.0 39.0 10 37.14688510805661 39.0 37.0 39.0 33.0 39.0 11 36.80405900750515 39.0 35.0 39.0 32.0 39.0 12 36.251107389048244 38.0 35.0 39.0 32.0 39.0 13 36.01716217570397 38.0 35.0 39.0 31.0 39.0 14 37.04585445830046 39.0 35.0 41.0 31.0 41.0 15 37.211914217752735 39.0 35.0 41.0 32.0 41.0 16 37.26832456689579 39.0 35.0 41.0 32.0 41.0 17 37.18908004017417 39.0 35.0 41.0 32.0 41.0 18 37.111565443886136 39.0 35.0 41.0 32.0 41.0 19 37.0591257974369 39.0 35.0 41.0 32.0 41.0 20 36.93297951132479 38.0 35.0 41.0 32.0 41.0 21 36.81559815584594 38.0 35.0 41.0 31.0 41.0 22 36.6904381410481 38.0 35.0 41.0 31.0 41.0 23 36.577847999692594 38.0 35.0 40.0 31.0 41.0 24 36.46335312657048 38.0 35.0 40.0 31.0 41.0 25 36.31686584223728 38.0 35.0 40.0 30.0 41.0 26 36.14416513903864 38.0 35.0 40.0 30.0 41.0 27 36.01863141104609 38.0 35.0 40.0 30.0 41.0 28 35.90275771706445 38.0 35.0 40.0 30.0 41.0 29 36.0277158061845 38.0 35.0 40.0 30.0 41.0 30 36.00113922248066 38.0 35.0 40.0 30.0 41.0 31 35.894933850504174 38.0 35.0 40.0 30.0 41.0 32 35.748671095469405 38.0 34.0 40.0 29.0 41.0 33 35.5630885888635 38.0 34.0 40.0 29.0 41.0 34 35.36409309376509 38.0 34.0 40.0 27.0 41.0 35 35.20796235140945 37.0 34.0 40.0 27.0 41.0 36 35.065429947235614 37.0 34.0 40.0 26.0 41.0 37 34.945358007445634 37.0 34.0 40.0 26.0 41.0 38 34.87255174533857 37.0 34.0 40.0 26.0 41.0 39 34.79739922740825 37.0 34.0 40.0 25.0 41.0 40 34.651755811579235 37.0 33.0 40.0 24.0 41.0 41 34.55237748649245 36.0 33.0 40.0 24.0 41.0 42 34.474346774199624 36.0 33.0 40.0 24.0 41.0 43 34.336482771143615 36.0 33.0 40.0 24.0 41.0 44 34.22110409645417 36.0 33.0 40.0 23.0 41.0 45 34.20016636264797 36.0 33.0 40.0 23.0 41.0 46 34.179349934939246 36.0 33.0 40.0 23.0 41.0 47 34.12850309029167 35.0 33.0 40.0 23.0 41.0 48 34.015029900822846 35.0 33.0 40.0 23.0 41.0 49 33.94581158676664 35.0 33.0 40.0 24.0 41.0 50 33.828464890172775 35.0 33.0 39.0 24.0 41.0 51 33.579546285057276 35.0 33.0 39.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 3.0 10 4.0 11 5.0 12 9.0 13 8.0 14 19.0 15 52.0 16 124.0 17 263.0 18 629.0 19 1354.0 20 2194.0 21 3601.0 22 5301.0 23 7643.0 24 11022.0 25 15450.0 26 20213.0 27 24197.0 28 27228.0 29 31173.0 30 36897.0 31 44254.0 32 54899.0 33 71263.0 34 117209.0 35 153320.0 36 107287.0 37 134133.0 38 183359.0 39 273989.0 40 119.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.06261730337299 24.29497423563973 28.044086101711773 14.598322359275508 2 32.453148345301955 25.454238593271207 28.535036742185365 13.557576319241482 3 30.508784897164826 25.399989903716108 30.07667901577808 14.01454618334098 4 27.279104233582803 27.658317642653333 29.77823587782291 15.284342245940955 5 24.183010968030192 32.105127932725594 28.592600629435488 15.11926046980872 6 22.851507021061302 40.898765164204 25.636348430291566 10.613379384443133 7 87.68162951008159 3.9788399972574275 6.393961518089301 1.9455689745716802 8 88.69811433062014 3.0626399069936356 6.177042105271089 2.06220365711513 9 83.42288134380031 4.958254879933334 8.068739117298476 3.5501246589678734 10 47.73703851882994 24.263781239145555 14.257761141512981 13.741419100511521 11 37.744505248183984 24.659043218876135 20.852367465553968 16.744084067385913 12 34.01317489702167 21.47750826727425 26.7540221259308 17.755294709773278 13 23.95991323223487 29.341307890697934 27.43122660054354 19.267552276523652 14 20.813639928843802 31.324850947958176 28.579565874861835 19.281943248336187 15 20.09017337730491 23.26319429846273 38.10895095843119 18.537681365801173 16 22.019693781216542 20.326456558478203 36.55819189117713 21.095657769128128 17 22.149363218333644 21.083828540989032 27.89648445888062 28.870323781796703 18 24.835577496136665 23.026534390278634 29.724966678495896 22.412921435088805 19 29.480922920900138 23.836196081888396 25.008193812484887 21.674687184726583 20 31.38384639784934 22.805320289537313 24.177209372063885 21.633623940549466 21 27.275412308876966 24.584149889129243 25.916256599315414 22.224181202678377 22 26.222611004497367 23.90106847314803 24.88334648110601 24.992974041248594 23 25.291115797595126 26.408337420821397 24.957787738439944 23.34275904314353 24 24.586334905791876 23.406651944175085 30.914670578599946 21.092342571433093 25 23.164717857839804 24.101261206686754 29.24042039720589 23.493600538267554 26 22.513582892374366 27.806823430310402 25.90171493669856 23.77787874061667 27 23.374328766648507 26.443146996619255 27.251829198000937 22.930695038731304 28 21.10839114209314 26.400350808192456 30.965528725057844 21.525729324656556 29 21.961301094542655 24.35690815621513 30.585712552770033 23.096078196472178 30 23.516882267534946 25.331726969359288 28.509343960048856 22.642046803056914 31 27.394533389691695 25.355536116441797 24.403546960152077 22.84638353371443 32 28.71405741771717 24.859537334023496 24.931944265499116 21.49446098276022 33 26.674306690445675 25.592572751636688 24.66589965047268 23.067220907444955 34 23.23139853875127 25.875193355138293 27.455713856245495 23.437694249864943 35 23.902726071995545 25.026050672796767 27.54906680952155 23.522156445686136 36 28.004680456382168 26.47004530519032 24.374162253309738 21.151111985117776 37 24.712915181420428 28.775087193466646 25.741605957108877 20.77039166800405 38 24.535175377725338 28.480335980217315 23.962098248897508 23.022390393159842 39 24.05236204068501 27.883148322698332 25.564770298239704 22.499719338376956 40 25.212756579348884 25.621053313653114 25.627683709043183 23.538506397954826 41 21.50953006319219 24.950253198223958 26.653059287036594 26.887157451547257 42 24.449130928458786 26.58381686245169 24.07617118776752 24.890881021321995 43 24.03691623324224 25.767223393843224 25.665883827938224 24.529976544976307 44 22.864466430232795 27.867325788244763 25.835260291993574 23.43294748952887 45 22.40177031556915 28.397305347037154 24.251725974799974 24.94919836259372 46 23.754747702153598 27.95969925129274 25.788018724839347 22.49753432171432 47 24.790294909438593 25.554523323545965 26.725164836903577 22.930016930111865 48 25.28094416830354 23.268845203624718 27.600301682990246 23.84990894508149 49 22.85632912679953 24.533141051867023 28.24676523352177 24.363764587811676 50 22.12314301838202 27.415102684481337 26.993846541005606 23.467907756131044 51 22.174603928057195 27.79002140562875 25.709885542799576 24.325489123514473 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 390.0 1 1071.0 2 1752.0 3 6308.5 4 10865.0 5 7861.5 6 4858.0 7 4837.0 8 4816.0 9 4891.5 10 4967.0 11 5042.5 12 5118.0 13 4980.5 14 4843.0 15 4824.0 16 4805.0 17 4602.5 18 4400.0 19 4264.5 20 4129.0 21 4463.0 22 4797.0 23 4816.5 24 4836.0 25 5629.0 26 8123.0 27 9824.0 28 11488.5 29 13153.0 30 15154.5 31 17156.0 32 18743.0 33 20330.0 34 24625.0 35 28920.0 36 29321.0 37 29722.0 38 34312.5 39 38903.0 40 48445.5 41 57988.0 42 69328.0 43 80668.0 44 85526.5 45 90385.0 46 94714.0 47 99043.0 48 96466.0 49 93889.0 50 92902.5 51 91916.0 52 88554.0 53 85192.0 54 82312.5 55 79433.0 56 78121.5 57 76810.0 58 74471.5 59 72133.0 60 69759.0 61 67385.0 62 61887.5 63 56390.0 64 49977.5 65 43565.0 66 38294.0 67 33023.0 68 29126.5 69 25230.0 70 21551.0 71 17872.0 72 15201.0 73 12530.0 74 10364.0 75 6603.5 76 5009.0 77 4020.5 78 3032.0 79 2176.5 80 1321.0 81 971.0 82 621.0 83 475.0 84 329.0 85 223.0 86 117.0 87 93.5 88 70.0 89 55.0 90 40.0 91 26.5 92 13.0 93 9.5 94 6.0 95 4.5 96 3.0 97 3.0 98 3.0 99 2.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1327221.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 23.35661703770259 #Duplication Level Percentage of deduplicated Percentage of total 1 75.34058510319826 17.597011936518424 2 5.771390392634888 2.6960031035169814 3 2.2775114033244273 1.5958488493934775 4 1.3909683692587838 1.2995326204934037 5 1.0504620941654965 1.2267620423023289 6 0.853479216274362 1.196063232249529 7 0.7386887880536795 1.2077289792830115 8 0.6466338841403897 1.2082543996375383 9 0.6211726847496766 1.3057643260781777 >10 10.673104401697925 59.81971734466261 >50 0.5951388012366683 8.392520306273449 >100 0.038270266899469774 1.5339614703181033 >500 9.729728872396721E-4 0.12991328007594014 >1k 0.0012972971829862295 0.38027094226310176 >5k 3.2432429574655736E-4 0.4106471669339193 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5421 0.4084474251085539 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 1688 0.127183038845829 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.027425726386185872 0.0 2 0.0 0.0 0.0 0.0872499757011078 0.0 3 0.0 0.0 0.0 0.15536221925361338 0.0 4 0.0 0.0 0.0 0.2591881834298885 0.0 5 0.0 0.0 0.0 0.460059025588052 0.0 6 0.0 0.0 0.0 0.8141824157393531 0.0 7 7.53454021598513E-5 0.0 0.0 0.9953881079337955 0.0 8 7.53454021598513E-5 0.0 0.0 1.4198841037023977 0.0 9 7.53454021598513E-5 0.0 0.0 1.6539822682130556 0.0 10 7.53454021598513E-5 0.0 0.0 1.9656108515462007 0.0 11 7.53454021598513E-5 0.0 0.0 2.2439367671246915 0.0 12 7.53454021598513E-5 0.0 0.0 2.464096032235777 0.0 13 7.53454021598513E-5 0.0 0.0 2.5735729015740407 0.0 14 7.53454021598513E-5 0.0 0.0 2.6300819531939292 0.0 15 7.53454021598513E-5 0.0 0.0 2.6958584892794795 0.0 16 7.53454021598513E-5 0.0 0.0 2.81226713561645 0.0 17 7.53454021598513E-5 0.0 0.0 2.941258464114115 0.0 18 7.53454021598513E-5 0.0 0.0 3.106566276452829 0.0 19 7.53454021598513E-5 0.0 0.0 3.2010494107612826 7.53454021598513E-5 20 7.53454021598513E-5 0.0 0.0 3.299525851384208 7.53454021598513E-5 21 7.53454021598513E-5 0.0 0.0 3.42512663678468 7.53454021598513E-5 22 7.53454021598513E-5 0.0 0.0 3.563536140552327 7.53454021598513E-5 23 7.53454021598513E-5 0.0 0.0 3.7179942149800222 7.53454021598513E-5 24 7.53454021598513E-5 0.0 0.0 3.8406565296962603 7.53454021598513E-5 25 7.53454021598513E-5 0.0 0.0 3.9453866386984533 7.53454021598513E-5 26 7.53454021598513E-5 0.0 0.0 4.041452026452264 7.53454021598513E-5 27 7.53454021598513E-5 0.0 0.0 4.142414865346464 7.53454021598513E-5 28 7.53454021598513E-5 0.0 0.0 4.25091224445665 7.53454021598513E-5 29 7.53454021598513E-5 0.0 0.0 4.364156383902907 7.53454021598513E-5 30 7.53454021598513E-5 0.0 0.0 4.49917534457336 7.53454021598513E-5 31 7.53454021598513E-5 0.0 0.0 4.624324057560873 7.53454021598513E-5 32 7.53454021598513E-5 0.0 0.0 4.757082656166531 7.53454021598513E-5 33 7.53454021598513E-5 0.0 0.0 4.881703951338926 7.53454021598513E-5 34 7.53454021598513E-5 0.0 0.0 5.013784441325145 7.53454021598513E-5 35 7.53454021598513E-5 0.0 0.0 5.161386084156294 7.53454021598513E-5 36 7.53454021598513E-5 0.0 0.0 5.303788894238412 7.53454021598513E-5 37 7.53454021598513E-5 0.0 0.0 5.446493085929171 7.53454021598513E-5 38 7.53454021598513E-5 0.0 0.0 5.591382294282565 7.53454021598513E-5 39 7.53454021598513E-5 0.0 0.0 5.751340583067929 7.53454021598513E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTATACG 40 6.8157533E-9 45.000004 1 ATTAGCG 65 0.0 41.53846 1 TATAGCG 105 0.0 40.714283 1 TACGGGA 305 0.0 39.836067 4 TTACGGG 410 0.0 39.512196 3 CGTTAGG 195 0.0 39.23077 2 CTATGCG 75 0.0 39.000004 1 CGTTTTT 4230 0.0 38.563828 1 GGGCGAT 3000 0.0 38.024998 7 GCGATAT 155 0.0 37.74194 9 ATAGGGC 670 0.0 37.611942 4 ATAGCGG 240 0.0 37.499996 2 CATAGCG 60 1.5643309E-10 37.499996 1 TCGTAAG 30 1.14001734E-4 37.499996 1 CCGACAA 30 1.14001734E-4 37.499996 32 GCGTTAG 85 0.0 37.058826 1 AGGGATC 775 0.0 36.870968 6 TATACGG 160 0.0 36.562504 2 ACGGGTA 105 0.0 36.42857 5 AGGGCGA 1495 0.0 36.421406 6 >>END_MODULE