##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545342_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3108853 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.166070573295038 31.0 31.0 33.0 30.0 33.0 2 31.525729585799006 31.0 31.0 34.0 30.0 34.0 3 31.705474977427365 31.0 31.0 34.0 30.0 34.0 4 35.50259082690626 37.0 35.0 37.0 33.0 37.0 5 35.411891459647656 37.0 35.0 37.0 33.0 37.0 6 35.464437848943 37.0 35.0 37.0 33.0 37.0 7 35.8010996338521 37.0 35.0 37.0 35.0 37.0 8 35.830211013515274 37.0 35.0 37.0 35.0 37.0 9 37.70991327026398 39.0 37.0 39.0 35.0 39.0 10 37.074466370716145 39.0 37.0 39.0 33.0 39.0 11 36.7091525395379 39.0 35.0 39.0 32.0 39.0 12 36.086754825654346 38.0 35.0 39.0 32.0 39.0 13 35.82154479481661 38.0 35.0 39.0 31.0 39.0 14 36.81314362563943 39.0 35.0 41.0 31.0 41.0 15 37.01906909075469 39.0 35.0 41.0 32.0 41.0 16 37.09013292040505 39.0 35.0 41.0 32.0 41.0 17 37.01519113319285 38.0 35.0 41.0 32.0 41.0 18 36.94820308325932 38.0 35.0 41.0 31.0 41.0 19 36.903571510135734 38.0 35.0 41.0 31.0 41.0 20 36.77825101412 38.0 35.0 41.0 31.0 41.0 21 36.664103449085566 38.0 35.0 41.0 31.0 41.0 22 36.53194538307215 38.0 35.0 40.0 31.0 41.0 23 36.43488804391845 38.0 35.0 40.0 31.0 41.0 24 36.32640945068808 38.0 35.0 40.0 30.0 41.0 25 36.187587190516886 38.0 35.0 40.0 30.0 41.0 26 36.003294784282176 38.0 35.0 40.0 30.0 41.0 27 35.8514899224891 38.0 34.0 40.0 30.0 41.0 28 35.73577007340006 38.0 34.0 40.0 29.0 41.0 29 35.87158929675993 38.0 34.0 40.0 30.0 41.0 30 35.86474111191491 38.0 35.0 40.0 30.0 41.0 31 35.76124120374942 38.0 34.0 40.0 29.0 41.0 32 35.64194897603714 38.0 34.0 40.0 29.0 41.0 33 35.45167687246711 37.0 34.0 40.0 28.0 41.0 34 35.27999619152144 37.0 34.0 40.0 27.0 41.0 35 35.15991846510594 37.0 34.0 40.0 27.0 41.0 36 35.00852565238691 37.0 34.0 40.0 26.0 41.0 37 34.90481923719134 37.0 33.0 40.0 26.0 41.0 38 34.83895732606206 37.0 33.0 40.0 26.0 41.0 39 34.769455487281 37.0 33.0 40.0 25.0 41.0 40 34.6180581712934 36.0 33.0 40.0 24.0 41.0 41 34.53655287014214 36.0 33.0 40.0 24.0 41.0 42 34.45689326578002 36.0 33.0 40.0 24.0 41.0 43 34.33800568891485 36.0 33.0 40.0 24.0 41.0 44 34.20402798073759 36.0 33.0 40.0 23.0 41.0 45 34.16869983881515 35.0 33.0 40.0 23.0 41.0 46 34.15674977234369 35.0 33.0 40.0 23.0 41.0 47 34.11761025690182 35.0 33.0 40.0 23.0 41.0 48 34.01220224951131 35.0 33.0 40.0 23.0 41.0 49 33.963094427430306 35.0 33.0 39.0 24.0 41.0 50 33.83849348939947 35.0 33.0 39.0 24.0 41.0 51 33.59667986874902 35.0 32.0 39.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 3.0 10 3.0 11 4.0 12 10.0 13 13.0 14 58.0 15 111.0 16 324.0 17 777.0 18 1704.0 19 3405.0 20 5678.0 21 9057.0 22 13403.0 23 18561.0 24 26468.0 25 36450.0 26 47622.0 27 57785.0 28 65345.0 29 75258.0 30 89170.0 31 107529.0 32 132304.0 33 169048.0 34 277793.0 35 376453.0 36 246660.0 37 305989.0 38 418385.0 39 623171.0 40 312.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.311593375434605 23.270125670142654 28.80901734498222 13.609263609440521 2 31.270793440539002 25.74348159916213 29.427669947726702 13.558055012572162 3 29.891828272356396 25.403806484256414 30.46139524770068 14.242969995686511 4 27.13470209109276 28.1104960575492 29.49026538083338 15.264536470524659 5 24.29201380702143 32.63846827109548 28.348365136595394 14.721152785287691 6 22.871586401801565 41.20194811398287 24.973358341484786 10.953107142730776 7 87.99139103714457 4.167228234979267 5.906937381728889 1.9344433461472768 8 88.87747346046918 3.3736236483358972 5.619403683609357 2.129499207585563 9 83.99895395504386 5.010722604124415 7.53075169523937 3.4595717455923456 10 49.24780940108779 23.368393423555247 13.294356471663344 14.089440703693612 11 39.51338323169349 23.067542916953617 20.117869838168613 17.301204013184286 12 34.89486315370974 21.803443263480133 25.80942231749137 17.492271265318752 13 23.418926530138286 31.062806765067375 26.438014277291334 19.080252427503005 14 20.337758009143563 32.694244468940795 27.914539542397147 19.05345797951849 15 19.771504152817776 22.94544000633031 39.08489722736971 18.198158613482207 16 21.16047301046399 19.461261114629735 37.627800349517976 21.7504655253883 17 21.663874104050592 20.354227105623842 27.711667293371544 30.27023149695402 18 24.60402598643294 22.58424570090641 30.119983157775554 22.691745154885098 19 29.967933511169555 23.792601322738644 24.30330414464756 21.936161021444242 20 31.529988712878993 22.311572789064005 24.433352107674438 21.72508639038256 21 26.91484608632187 24.59357197011245 25.873851224229643 22.617730719336038 22 25.74531507279373 23.717396737639252 24.47452484887513 26.06276334069189 23 24.572824768491788 26.757971509106415 24.592156657133675 24.077047065268122 24 24.334762692221215 23.27597991928213 31.66203098055778 20.727226407938875 25 23.26285610802441 23.86973588008182 29.479940029329143 23.38746798256463 26 21.91637880594547 28.557702792637667 25.713985190036325 23.81193321138053 27 22.83388761063968 27.337831669750866 27.099158435603098 22.729122284006355 28 20.953193991481747 26.643556321254174 31.76090989184757 20.642339795416508 29 21.86455905119991 23.540321784272205 30.97611884511748 23.619000319410407 30 23.364340481843303 26.146041643011102 28.108405254285103 22.38121262086049 31 28.126900821621348 25.3281837385042 24.091168028851797 22.45374741102265 32 28.922724876345068 24.838710611276895 24.87197046627808 21.36659404609996 33 27.469970436041848 25.433946217463482 24.217581210819553 22.87850213567512 34 22.241772126247206 25.563415188817224 27.654604447363706 24.540208237571864 35 23.45672181991236 24.190368602182218 28.397161268159028 23.95574830974639 36 28.324208317344052 25.968709360011555 23.960412409335532 21.746669913308864 37 24.012135665468904 28.805382563923093 26.170552290507143 21.01192948010086 38 23.68352572476087 29.29443753049758 24.09181135293306 22.93022539180849 39 23.629872496383715 28.129602782762646 25.13052241453681 23.110002306316833 40 24.6499271596309 25.441408776806107 25.426451491916797 24.482212571646198 41 20.880112375850516 24.448534555992193 26.088914464595142 28.58243860356215 42 23.25082594770483 26.02442122544874 24.37989187652166 26.344860950324765 43 23.58763827044894 25.338090929355616 25.963015941892397 25.111254858303045 44 22.914656949041976 26.55863754252774 26.34775590869044 24.17894959973984 45 21.62778362309186 28.840829720800564 24.477194643812364 25.05419201229521 46 23.07339716609309 28.652946922868338 25.51535887994704 22.75829703109153 47 23.894729020638803 25.419825253879807 27.041194935881496 23.644250789599894 48 23.9822854280984 23.104855713666744 28.337267796193643 24.57559106204121 49 22.402828309990856 23.955330149093573 28.81316678530635 24.828674755609224 50 21.521860313112263 27.732414494992202 27.440956519976982 23.30476867191855 51 21.732452451112998 28.47014638517807 24.744624464392494 25.052776699316436 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 903.0 1 2645.5 2 4388.0 3 12054.5 4 19721.0 5 14670.5 6 9620.0 7 9371.5 8 9123.0 9 9303.0 10 9483.0 11 9467.0 12 9451.0 13 9652.5 14 9854.0 15 9634.0 16 9414.0 17 9045.0 18 8676.0 19 8748.0 20 8820.0 21 9184.5 22 9549.0 23 10221.5 24 10894.0 25 12503.0 26 16329.5 27 18547.0 28 23571.5 29 28596.0 30 34664.5 31 40733.0 32 45129.0 33 49525.0 34 55923.0 35 62321.0 36 67221.0 37 72121.0 38 83373.0 39 94625.0 40 119910.5 41 145196.0 42 178450.0 43 211704.0 44 222319.0 45 232934.0 46 233587.0 47 234240.0 48 231881.0 49 229522.0 50 221903.0 51 214284.0 52 203529.0 53 192774.0 54 185504.5 55 178235.0 56 175682.5 57 173130.0 58 171155.0 59 169180.0 60 163018.0 61 156856.0 62 143301.5 63 129747.0 64 115753.5 65 101760.0 66 89804.0 67 77848.0 68 67128.0 69 56408.0 70 48266.5 71 40125.0 72 33021.0 73 25917.0 74 22038.0 75 14505.5 76 10852.0 77 8023.5 78 5195.0 79 3763.0 80 2331.0 81 1664.5 82 998.0 83 796.5 84 595.0 85 443.0 86 291.0 87 166.5 88 42.0 89 33.5 90 25.0 91 19.0 92 13.0 93 9.0 94 5.0 95 6.5 96 8.0 97 5.0 98 2.0 99 1.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3108853.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.49081219283945 #Duplication Level Percentage of deduplicated Percentage of total 1 79.85109282099761 14.765115607460572 2 7.238905169230988 2.677064719320498 3 2.338460640095613 1.2972010954906532 4 1.1188963267051084 0.8275720736144838 5 0.6845597339147103 0.6329032737298528 6 0.47680280862021196 0.5289882712328826 7 0.36247823207946667 0.46917618393617233 8 0.28763849491716137 0.42549355111553894 9 0.24761832811117718 0.41207976005478075 >10 3.9436944964167413 19.132036412890322 >50 2.4460383320034054 33.21775294070552 >100 0.9969621340622001 23.916274418379704 >500 0.004744026585439305 0.6241179918247584 >1k 0.0019327515718456424 0.7500787130274958 >5k 1.7570468834960385E-4 0.3241449872168461 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9977 0.32092221793696907 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 4156 0.13368274408600214 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 3840 0.12351822360208091 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.21662040630419E-5 0.0 0.0 0.037409295325317726 0.0 2 3.21662040630419E-5 0.0 0.0 0.1318814366584718 0.0 3 3.21662040630419E-5 0.0 0.0 0.2004597837208771 0.0 4 3.21662040630419E-5 0.0 0.0 0.3254254865057949 0.0 5 3.21662040630419E-5 0.0 0.0 0.5869045593342626 0.0 6 3.21662040630419E-5 0.0 0.0 0.935007219704502 0.0 7 3.21662040630419E-5 0.0 0.0 1.1163924444159952 0.0 8 3.21662040630419E-5 0.0 0.0 1.5427554792716156 0.0 9 3.21662040630419E-5 0.0 0.0 1.727260825777224 0.0 10 3.21662040630419E-5 0.0 0.0 1.9988400866814866 0.0 11 3.21662040630419E-5 0.0 0.0 2.279265053703086 0.0 12 3.21662040630419E-5 0.0 0.0 2.5082240942238183 0.0 13 3.21662040630419E-5 0.0 0.0 2.6148228944887393 0.0 14 3.21662040630419E-5 0.0 0.0 2.6662566547855433 0.0 15 3.21662040630419E-5 0.0 0.0 2.7331623592366703 0.0 16 3.21662040630419E-5 0.0 0.0 2.8777172802959807 0.0 17 3.21662040630419E-5 0.0 0.0 3.04076776869154 0.0 18 3.21662040630419E-5 0.0 0.0 3.2363704555988977 3.21662040630419E-5 19 3.21662040630419E-5 0.0 0.0 3.344867061903538 6.43324081260838E-5 20 3.21662040630419E-5 0.0 0.0 3.4550041446153936 6.43324081260838E-5 21 3.21662040630419E-5 0.0 0.0 3.598980074001569 6.43324081260838E-5 22 3.21662040630419E-5 0.0 0.0 3.7618375651727503 6.43324081260838E-5 23 3.21662040630419E-5 0.0 0.0 3.945924751025539 6.43324081260838E-5 24 3.21662040630419E-5 0.0 0.0 4.098231727264042 6.43324081260838E-5 25 6.43324081260838E-5 0.0 0.0 4.223004432824582 6.43324081260838E-5 26 6.43324081260838E-5 0.0 0.0 4.342566213326909 6.43324081260838E-5 27 6.43324081260838E-5 0.0 0.0 4.459072204443246 6.43324081260838E-5 28 6.43324081260838E-5 0.0 0.0 4.583555414167218 6.43324081260838E-5 29 6.43324081260838E-5 0.0 0.0 4.716337504539456 6.43324081260838E-5 30 6.43324081260838E-5 0.0 0.0 4.8757210456718285 6.43324081260838E-5 31 6.43324081260838E-5 0.0 0.0 5.029025174236286 6.43324081260838E-5 32 6.43324081260838E-5 0.0 0.0 5.1756708985596935 6.43324081260838E-5 33 6.43324081260838E-5 0.0 0.0 5.324857753004082 6.43324081260838E-5 34 6.43324081260838E-5 0.0 0.0 5.47816188156854 6.43324081260838E-5 35 6.43324081260838E-5 0.0 0.0 5.65803529468907 6.43324081260838E-5 36 6.43324081260838E-5 0.0 0.0 5.817676165453947 6.43324081260838E-5 37 6.43324081260838E-5 0.0 0.0 5.979343507074796 6.43324081260838E-5 38 6.43324081260838E-5 0.0 0.0 6.140303192206257 6.43324081260838E-5 39 6.43324081260838E-5 0.0 0.0 6.302388694479926 6.43324081260838E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTACGAA 485 0.0 40.824745 11 GCTACGA 490 0.0 40.408165 10 TAATGCG 95 0.0 40.26316 1 CTTAACG 40 3.4607547E-7 39.375004 1 CGAATAT 505 0.0 39.207924 14 TACGGGA 745 0.0 38.355705 4 TGCGTAG 295 0.0 38.135593 1 ATAGGGC 1550 0.0 37.596775 4 TATACGG 330 0.0 37.5 2 CGTAGAA 30 1.1403698E-4 37.499996 40 GTAACGT 30 1.1403698E-4 37.499996 33 TACGAAA 985 0.0 37.46193 20 CATACGA 985 0.0 37.46193 18 CGTTTTT 7680 0.0 37.35351 1 ATAACGG 235 0.0 37.340427 2 TAAGGGA 2245 0.0 37.182625 4 TACGAAT 535 0.0 37.009346 12 TGACTAT 535 0.0 36.168224 23 AACGGGA 855 0.0 36.05263 4 GGGCGAT 7265 0.0 36.049553 7 >>END_MODULE