##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545336_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 598159 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.13275901557947 31.0 31.0 33.0 30.0 34.0 2 31.48584573666868 31.0 31.0 34.0 30.0 34.0 3 31.603023610779072 31.0 31.0 34.0 30.0 34.0 4 35.424403879236124 37.0 35.0 37.0 33.0 37.0 5 35.35447431201403 37.0 35.0 37.0 33.0 37.0 6 35.41373614707795 37.0 35.0 37.0 33.0 37.0 7 35.83278191918871 37.0 35.0 37.0 35.0 37.0 8 35.89196852341936 37.0 35.0 37.0 35.0 37.0 9 37.78928177959372 39.0 37.0 39.0 35.0 39.0 10 37.06543912237382 39.0 37.0 39.0 33.0 39.0 11 36.70758109465878 39.0 35.0 39.0 32.0 39.0 12 36.05669897134374 37.0 35.0 39.0 32.0 39.0 13 35.7854684122449 38.0 35.0 39.0 31.0 39.0 14 36.776121399159756 39.0 35.0 41.0 31.0 41.0 15 37.013063416248855 39.0 35.0 41.0 32.0 41.0 16 37.07867640543735 39.0 35.0 41.0 32.0 41.0 17 36.987377937973015 38.0 35.0 41.0 32.0 41.0 18 36.90841398357293 38.0 35.0 40.0 32.0 41.0 19 36.86525321862582 38.0 35.0 40.0 31.0 41.0 20 36.72232800977667 38.0 35.0 40.0 31.0 41.0 21 36.60901700049652 38.0 35.0 40.0 31.0 41.0 22 36.47853664326709 38.0 35.0 40.0 31.0 41.0 23 36.401990106309526 38.0 35.0 40.0 31.0 41.0 24 36.31627376667408 38.0 35.0 40.0 31.0 41.0 25 36.197449173213144 38.0 35.0 40.0 30.0 41.0 26 36.02534610362797 38.0 35.0 40.0 30.0 41.0 27 35.89321902704799 38.0 34.0 40.0 30.0 41.0 28 35.83656519420422 37.0 34.0 40.0 30.0 41.0 29 35.96731638243343 38.0 35.0 40.0 30.0 41.0 30 35.92329297059812 38.0 35.0 40.0 30.0 41.0 31 35.79261534140588 38.0 34.0 40.0 30.0 41.0 32 35.61874351134063 38.0 34.0 40.0 29.0 41.0 33 35.35514470232831 37.0 34.0 40.0 27.0 41.0 34 35.17029920138291 37.0 34.0 40.0 27.0 41.0 35 35.01976899118796 37.0 34.0 40.0 26.0 41.0 36 34.864898797811286 37.0 34.0 40.0 25.0 41.0 37 34.7661106829455 37.0 34.0 40.0 24.0 41.0 38 34.72540913034828 37.0 33.0 40.0 25.0 41.0 39 34.64928221426076 37.0 33.0 40.0 24.0 41.0 40 34.54216019486458 37.0 33.0 40.0 24.0 41.0 41 34.4839114683554 37.0 33.0 40.0 23.0 41.0 42 34.40637857158381 36.0 33.0 40.0 23.0 41.0 43 34.28467180131035 36.0 33.0 40.0 23.0 41.0 44 34.157488226374596 36.0 33.0 40.0 23.0 41.0 45 34.10966314976453 36.0 33.0 40.0 23.0 41.0 46 34.11647237607392 36.0 33.0 40.0 23.0 41.0 47 34.112348054614245 36.0 33.0 40.0 23.0 41.0 48 34.03578479969373 36.0 33.0 40.0 23.0 41.0 49 34.003485695275 36.0 33.0 40.0 23.0 41.0 50 33.861949749146966 35.0 33.0 40.0 23.0 41.0 51 33.61669723267559 35.0 33.0 39.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 2.0 13 2.0 14 8.0 15 16.0 16 64.0 17 135.0 18 328.0 19 604.0 20 1030.0 21 1757.0 22 2614.0 23 3801.0 24 5626.0 25 7907.0 26 10460.0 27 11976.0 28 12888.0 29 14688.0 30 16864.0 31 20093.0 32 24984.0 33 31761.0 34 51521.0 35 73120.0 36 44604.0 37 55581.0 38 79780.0 39 125890.0 40 54.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.575855249189594 23.89715777911893 27.85212627411775 14.674860697573722 2 31.748581898792793 25.265021507659334 29.54465284314037 13.4417437504075 3 28.179965527560398 25.127432672583712 32.46962764081122 14.222974159044668 4 24.85710321168786 28.3234056496684 31.909074343109438 14.910416795534298 5 23.02949550203207 32.44154146305581 30.511118281259662 14.017844753652456 6 20.874717257451614 41.27397564861517 27.23155548942672 10.619751604506494 7 88.64933905533479 3.3330602732718226 6.5780168817989875 1.4395837895944055 8 89.95634939873847 2.3722789425554076 6.147863695104479 1.523507963601651 9 85.29187055615647 4.267260042898293 8.002220145479713 2.43864925546552 10 46.351388176053526 26.5295682251709 15.107521578710678 12.011522020064898 11 38.73351399878628 23.516991301643877 22.254785098945266 15.494709600624585 12 33.34447864196643 23.437580977633036 26.95102807113159 16.266912309268942 13 21.71880720677947 35.01008929064011 27.274687833836825 15.996415668743595 14 18.9763925645188 35.82910229554349 28.94330771584144 16.25119742409627 15 18.30483199283134 24.523914210101328 40.940117928510645 16.231135868556688 16 20.05687450995471 21.667650240153538 39.11368047626133 19.161794773630422 17 19.883509234166834 21.900865823301164 28.721125988240587 29.494498954291416 18 23.458478431320103 23.964363990176523 31.53960736192216 21.03755021658121 19 27.57109731693413 26.02100779224253 25.38806571496876 21.01982917585458 20 30.08263689086012 24.01000402902907 25.51729556856956 20.390063511541246 21 24.669026128504292 27.479984418858532 27.248607811635367 20.602381641001806 22 24.55785167488912 24.62823429890715 26.182168955077163 24.631745071126574 23 21.670492293854977 29.260280293366815 25.410802144580284 23.65842526819792 24 22.04932133429406 25.466138601943634 33.72932614906739 18.75521391469492 25 20.472483068883022 26.30337418646213 31.539273002663172 21.684869741991676 26 20.897119327804145 30.6483727570763 27.321832489354836 21.13267542576472 27 20.742478170519878 29.747441733719633 28.115099831315753 21.394980264444737 28 18.560784005590484 27.679262537218364 33.941644278527946 19.8183091786632 29 20.036812954415133 24.209114967759408 33.239489834642626 22.514582243182833 30 22.12003831757108 27.344736098595856 29.78321817443188 20.75200740940118 31 27.29207451530446 26.32995574755207 24.89739350239652 21.480576234746948 32 28.135161386855334 26.441297380796748 25.629473099961714 19.794068132386204 33 26.107606840321722 26.514522058516217 25.807352225746 21.570518875416067 34 20.73729560200549 26.73870994167103 28.87158765478744 23.652406801536046 35 21.31306224599145 26.612990860289653 29.89338955027008 22.180557343448815 36 27.648668665020505 26.193871529141916 25.593696659249467 20.563763146588116 37 21.95737253807098 29.748611991126104 27.355268415254137 20.938747055548777 38 21.24134218493745 30.937426336475752 24.887529904256226 22.93370157433057 39 21.91591198995585 30.787131849558396 25.73513062580351 21.56182553468225 40 24.23486063070187 26.186515625444073 25.23492917434996 24.343694569504095 41 19.973619054465452 25.405118037177406 26.24970952539375 28.371553382963395 42 22.170693745308522 27.070895865480583 24.307750949162347 26.450659440048547 43 22.560222282035376 26.744561228703407 26.122318647717414 24.572897841543803 44 21.28815248119647 29.62540060418718 27.22369804684039 21.86274886777596 45 20.302461385685078 31.274962008429195 24.624890706317217 23.79768589956851 46 22.33101900999567 30.255834987018503 25.800832220195634 21.612313782790192 47 21.971582806578187 26.706444273178203 27.14963747097344 24.17233544927018 48 23.534879522000004 24.342858671356613 28.77830142152839 23.343960385114997 49 22.206804545279766 24.227170367745032 29.60299853383465 23.963026553140555 50 20.14447663581088 29.957920887255728 27.235902159793635 22.661700317139758 51 19.57807205107672 30.614769651547498 25.89044050160576 23.91671779577002 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 137.0 1 300.0 2 463.0 3 2454.0 4 4445.0 5 3334.0 6 2223.0 7 2323.0 8 2423.0 9 2512.0 10 2601.0 11 2624.5 12 2648.0 13 2659.0 14 2670.0 15 2566.5 16 2463.0 17 2386.0 18 2309.0 19 2337.5 20 2366.0 21 2258.5 22 2151.0 23 2461.0 24 2771.0 25 2905.5 26 3452.5 27 3865.0 28 4713.0 29 5561.0 30 6943.5 31 8326.0 32 9661.0 33 10996.0 34 13237.0 35 15478.0 36 17076.5 37 18675.0 38 21156.0 39 23637.0 40 29522.5 41 35408.0 42 40747.0 43 46086.0 44 48608.0 45 51130.0 46 50265.0 47 49400.0 48 48629.5 49 47859.0 50 47237.0 51 46615.0 52 43586.0 53 40557.0 54 37573.0 55 34589.0 56 31866.0 57 29143.0 58 27373.5 59 25604.0 60 23413.5 61 21223.0 62 18721.5 63 16220.0 64 14330.5 65 12441.0 66 10532.0 67 8623.0 68 6983.5 69 5344.0 70 4398.5 71 3453.0 72 2649.5 73 1846.0 74 1674.0 75 1210.5 76 919.0 77 713.5 78 508.0 79 355.5 80 203.0 81 167.0 82 131.0 83 90.5 84 50.0 85 46.5 86 43.0 87 25.0 88 7.0 89 5.5 90 4.0 91 3.0 92 2.0 93 1.0 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 598159.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 30.90008562457435 #Duplication Level Percentage of deduplicated Percentage of total 1 71.87438022021881 22.209245030179744 2 6.5614400087661755 4.054981161827654 3 3.301865979091761 3.0608382442441333 4 2.236381630374362 2.764175354711719 5 1.7517938115076408 2.7065289386092775 6 1.5338802171082713 2.8438218027891766 7 1.2475845622286466 2.6985328857733597 8 1.1363030441779027 2.808948908844935 9 0.9704545310002674 2.6988415292397963 >10 9.31128506974796 51.92608862338239 >50 0.06591490524930062 1.253711508909363 >100 0.007081766679674858 0.2930601150658783 >500 0.0010895025661038242 0.26259263613025285 >1k 5.447512830519121E-4 0.4186332602922685 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2487 0.41577573855780825 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 896 0.14979294802886858 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 664 0.1110072739856794 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.03477336293527306 0.0 2 0.0 0.0 0.0 0.10649342398927375 0.0 3 0.0 0.0 0.0 0.18239297578068708 0.0 4 0.0 0.0 0.0 0.30025461457572317 0.0 5 0.0 0.0 0.0 0.5510240588204809 0.0 6 0.0 0.0 0.0 0.9711464677451982 0.0 7 0.0 0.0 0.0 1.209377439777718 0.0 8 0.0 0.0 0.0 1.751206618975891 0.0 9 0.0 0.0 0.0 2.0165206909868445 0.0 10 0.0 0.0 0.0 2.339678914803589 0.0 11 0.0 0.0 0.0 2.6421068645627668 0.0 12 0.0 0.0 0.0 2.8688024421600278 0.0 13 0.0 0.0 0.0 2.989004595768015 0.0 14 0.0 0.0 0.0 3.0503595197932323 0.0 15 0.0 0.0 0.0 3.119070347516296 0.0 16 0.0 0.0 0.0 3.2600027751818494 0.0 17 0.0 0.0 0.0 3.4221670157934594 0.0 18 0.0 0.0 0.0 3.6259589841496993 0.0 19 0.0 0.0 0.0 3.736799078505882 0.0 20 0.0 0.0 0.0 3.8576699506318555 0.0 21 0.0 0.0 0.0 4.019499831984472 0.0 22 0.0 0.0 0.0 4.20523640035509 0.0 23 0.0 0.0 0.0 4.420563763146588 0.0 24 0.0 0.0 0.0 4.592424422268995 0.0 25 0.0 0.0 0.0 4.742718909186354 0.0 26 0.0 0.0 0.0 4.883316977592914 0.0 27 0.0 0.0 0.0 5.021072992298034 0.0 28 0.0 0.0 0.0 5.175546969952805 0.0 29 0.0 0.0 0.0 5.334701977233478 0.0 30 0.0 0.0 0.0 5.535317532629284 0.0 31 1.671796294965051E-4 0.0 0.0 5.718546406557453 0.0 32 1.671796294965051E-4 0.0 0.0 5.904951693446057 0.0 33 1.671796294965051E-4 0.0 0.0 6.087010309967751 0.0 34 3.343592589930102E-4 0.0 0.0 6.266728411676494 0.0 35 3.343592589930102E-4 0.0 0.0 6.483393211503965 0.0 36 3.343592589930102E-4 0.0 0.0 6.689525694673155 0.0 37 3.343592589930102E-4 0.0 0.0 6.88880381303299 0.0 38 3.343592589930102E-4 0.0 0.0 7.103796816565495 0.0 39 3.343592589930102E-4 0.0 0.0 7.317118023803036 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGCACTA 50 2.1827873E-11 45.0 8 CCGTAGG 20 7.0305704E-4 45.0 2 GTTGATC 100 0.0 42.75 16 CGTTTTT 2420 0.0 42.303722 1 GCGATAT 75 0.0 42.0 9 TACGAAT 120 0.0 41.249996 12 CGAATAT 115 0.0 41.08696 14 CGAATGG 50 1.0804797E-9 40.5 2 TATAGCG 45 1.9255822E-8 40.0 1 TGCGTAG 45 1.9255822E-8 40.0 1 CTTACGG 45 1.9255822E-8 40.0 2 GGATGCC 330 0.0 39.545456 8 CGAGGGT 80 0.0 39.375 4 GTCCACG 40 3.4545155E-7 39.375 40 AACGGGA 155 0.0 39.193546 4 CACGTGA 230 0.0 39.130436 43 CGTTAGG 110 0.0 38.863636 2 AGGGCGA 715 0.0 38.70629 6 ACGACCA 250 0.0 38.7 28 TGTACGG 70 0.0 38.571426 2 >>END_MODULE