SRR1545335_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545335_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	167415
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	499	0.2980617029537377	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	436	0.2604306663082758	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGTACCT	35	1.2036253E-7	45.000004	8
CGACAAT	35	1.2036253E-7	45.000004	20
TATGCCC	35	1.2036253E-7	45.000004	10
TCATCGA	35	1.2036253E-7	45.000004	16
TTGTTAG	35	1.2036253E-7	45.000004	1
TTCATCG	35	1.2036253E-7	45.000004	15
TCGACAA	35	1.2036253E-7	45.000004	19
ACACGTG	25	3.8764912E-5	45.0	42
ACGTTAG	25	3.8764912E-5	45.0	1
GTTTAAG	20	7.016009E-4	45.0	1
GGATCGC	20	7.016009E-4	45.0	8
CACGAGG	20	7.016009E-4	45.0	2
TACGGGA	25	3.8764912E-5	45.0	4
ACGGGAA	20	7.016009E-4	45.0	5
ATGTATG	20	7.016009E-4	45.0	1
TACATTG	20	7.016009E-4	45.0	1
TCTACGG	25	3.8764912E-5	45.0	2
CTAAAGG	20	7.016009E-4	45.0	2
CTACGAA	25	3.8764912E-5	45.0	11
TACGAAT	25	3.8764912E-5	45.0	12