##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545335_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 167415 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.231233760415734 31.0 31.0 33.0 30.0 34.0 2 31.598488785353762 31.0 31.0 34.0 30.0 34.0 3 31.79228265089747 31.0 31.0 34.0 30.0 34.0 4 35.56381447301616 37.0 35.0 37.0 33.0 37.0 5 35.47673744885464 37.0 35.0 37.0 33.0 37.0 6 35.523214765702 37.0 35.0 37.0 33.0 37.0 7 35.834017262491415 37.0 35.0 37.0 35.0 37.0 8 35.877113759221096 37.0 35.0 37.0 35.0 37.0 9 37.80774124182421 39.0 37.0 39.0 35.0 39.0 10 37.21675477107786 39.0 37.0 39.0 34.0 39.0 11 36.79649374309351 39.0 35.0 39.0 32.0 39.0 12 35.66204939820207 37.0 35.0 39.0 31.0 39.0 13 35.09242302063734 37.0 35.0 39.0 30.0 39.0 14 35.951438043186094 38.0 35.0 40.0 30.0 41.0 15 36.35654511244512 38.0 35.0 40.0 31.0 41.0 16 36.563414269928025 38.0 35.0 40.0 32.0 41.0 17 36.52644625630917 38.0 35.0 40.0 32.0 41.0 18 36.498491771943975 37.0 35.0 40.0 31.0 41.0 19 36.44903383806708 37.0 35.0 40.0 31.0 41.0 20 36.27203058268375 37.0 35.0 40.0 31.0 41.0 21 36.104082668817014 36.0 35.0 40.0 31.0 41.0 22 35.94791386673835 36.0 34.0 40.0 31.0 41.0 23 35.92371651285727 36.0 34.0 40.0 31.0 41.0 24 35.796314547680915 36.0 34.0 40.0 30.0 41.0 25 35.68621688618105 35.0 34.0 40.0 30.0 41.0 26 35.51497774990293 35.0 34.0 40.0 30.0 41.0 27 35.390645999462414 35.0 34.0 40.0 30.0 41.0 28 35.35999761072783 36.0 34.0 40.0 29.0 41.0 29 35.50251172236658 36.0 34.0 40.0 30.0 41.0 30 35.51147746617686 36.0 34.0 40.0 30.0 41.0 31 35.35431711614849 36.0 34.0 40.0 30.0 41.0 32 35.20936594689842 35.0 34.0 40.0 29.0 41.0 33 35.04573664247528 35.0 34.0 40.0 29.0 41.0 34 34.89640713197742 35.0 34.0 40.0 28.0 41.0 35 34.78218797598782 35.0 34.0 40.0 27.0 41.0 36 34.54863064838874 35.0 33.0 40.0 26.0 41.0 37 34.38675745900905 35.0 33.0 40.0 25.0 41.0 38 34.38542543977541 35.0 33.0 40.0 26.0 41.0 39 34.35328972911627 35.0 33.0 40.0 26.0 41.0 40 34.154149867096734 35.0 33.0 40.0 24.0 41.0 41 34.12949257832333 35.0 33.0 39.0 24.0 41.0 42 34.07756772093301 35.0 33.0 39.0 24.0 41.0 43 33.93276588119344 35.0 33.0 39.0 24.0 41.0 44 33.81499268285398 35.0 33.0 39.0 23.0 41.0 45 33.769692082549355 35.0 33.0 39.0 23.0 41.0 46 33.811313203715315 35.0 33.0 39.0 24.0 41.0 47 33.812633276588116 35.0 33.0 39.0 24.0 41.0 48 33.80374518412329 35.0 33.0 39.0 24.0 41.0 49 33.76568407848759 35.0 33.0 39.0 24.0 41.0 50 33.598118448167725 35.0 33.0 39.0 24.0 41.0 51 33.35456798972613 35.0 33.0 38.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 1.0 13 0.0 14 0.0 15 4.0 16 15.0 17 40.0 18 87.0 19 202.0 20 293.0 21 478.0 22 702.0 23 1055.0 24 1436.0 25 2022.0 26 2654.0 27 3126.0 28 3544.0 29 4074.0 30 4886.0 31 6133.0 32 7431.0 33 10033.0 34 18962.0 35 28912.0 36 11512.0 37 13712.0 38 18289.0 39 27787.0 40 24.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.215751276767314 24.29232744975062 29.74046531075471 13.751455962727356 2 28.8743541498671 26.44267240091987 30.606576471642327 14.076396977570708 3 28.230445300600305 25.424842457366424 31.489412537705704 14.855299704327567 4 25.682286533464744 28.83074993280172 30.315682585192487 15.17128094854105 5 23.356927395991995 32.1542275184422 29.52722276976376 14.961622315802048 6 21.869605471433264 40.72335214885165 26.683391571842428 10.723650807872652 7 88.391721171938 4.209300241913807 5.518621389959084 1.880357196189111 8 90.59940865513842 2.7034614580533405 4.698503718304811 1.9986261685034197 9 86.87154675506974 3.8329898754591882 6.605142908341547 2.6903204611295286 10 59.58187737060599 18.70501448496252 10.634053101573933 11.079055042857568 11 51.629184959531706 18.585550876564227 16.348594809306217 13.436669354597855 12 44.87829644894424 19.759878147119434 21.381596631126243 13.980228772810083 13 22.29071469103724 41.56019472568169 21.66532270107219 14.48376788220888 14 16.645461876175972 42.532031180001795 26.088462802018935 14.734044141803304 15 14.688050652569961 21.161783591673387 49.5385718125616 14.611593943195054 16 16.995490248782964 15.655108562554132 47.25383030194427 20.095570886718633 17 17.417196786428935 16.581548845682885 27.286682794253803 38.71457157363438 18 23.766687572798137 21.877370605979156 31.944568885703195 22.411372935519516 19 32.16617387928202 22.536212406295732 23.09709404772571 22.200519666696533 20 33.96410118567631 22.16288863005107 21.87318937968521 21.999820804587404 21 24.127467670160975 26.799271271988772 25.824448227458713 23.24881283039154 22 25.08138458322134 24.133440850580893 22.877281008272853 27.90789355792492 23 22.024908162351046 29.57918943941702 22.47409132992862 25.92181106830332 24 21.98966639787355 22.750649583370667 36.9435235791297 18.316160439626078 25 18.588537466774184 23.4405519218708 34.235283576740436 23.73562703461458 26 18.283307947316548 33.6296030821611 25.4475405429621 22.639548427560253 27 20.73231191948153 30.89627572200818 27.166621867813518 21.20479049069677 28 16.695636591703252 27.4897709285309 37.46199563957829 18.35259684018756 29 17.59280829077442 23.161604396260792 36.43998446973091 22.80560284323388 30 19.99581877370606 27.99032344771974 30.267299823791177 21.746557954783025 31 30.097661499865602 25.150076158050354 22.462742287130784 22.28952005495326 32 32.115401845712746 25.246244362810977 23.175940029268585 19.462413762207685 33 28.98306603350954 26.106979661320672 22.87967028044082 22.030284024728967 34 20.210255950780994 25.23847922826509 28.492667921034553 26.058596899919362 35 21.677269061912018 23.78460711405788 29.910103634680286 24.62802018934982 36 31.85019263506854 23.380820117671654 23.90645999462414 20.862527252635665 37 22.972254576949496 29.652659558581966 27.51545560433653 19.859630260132008 38 22.910730818624376 31.32395544007407 21.397126900218023 24.368186841083535 39 22.53382313412777 30.34196457904011 25.216378460711407 21.90783382612072 40 24.96072633873906 24.666845862079263 23.32945076606039 27.042977033121286 41 18.768927515455605 22.480064510348534 25.47800376310366 33.27300421109219 42 23.68664695517128 25.352566974285455 22.218439207956276 28.742346862586988 43 24.294119403876593 25.43917809037422 24.388495654511246 25.87820685123794 44 21.63067825463668 29.386853029895764 26.333363199235432 22.64910551623212 45 18.745632111817937 34.455693934235285 21.414449123435773 25.384224830511005 46 23.05050324045038 30.4267837410029 25.150673476092344 21.37203954245438 47 23.266135053609293 25.26834513036466 26.69712988680823 24.76838992921781 48 25.522802616253028 21.029776304393273 28.914374458680527 24.533046620673176 49 21.556610817429743 21.685631514499896 30.752322073888244 26.005435594182124 50 19.57709882627005 31.64770181883344 25.645252814861273 23.12994654003524 51 19.52871606486874 33.06334557835319 22.353433085446344 25.054505271331724 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 42.0 1 128.5 2 215.0 3 512.0 4 809.0 5 598.5 6 388.0 7 406.0 8 424.0 9 445.0 10 466.0 11 485.0 12 504.0 13 543.5 14 583.0 15 549.5 16 516.0 17 474.5 18 433.0 19 430.5 20 428.0 21 423.5 22 419.0 23 419.0 24 419.0 25 451.5 26 542.5 27 601.0 28 917.0 29 1233.0 30 1385.5 31 1538.0 32 1775.5 33 2013.0 34 2414.5 35 2816.0 36 2868.5 37 2921.0 38 3870.5 39 4820.0 40 7889.5 41 10959.0 42 13397.0 43 15835.0 44 15810.0 45 15785.0 46 14937.0 47 14089.0 48 13882.5 49 13676.0 50 13338.5 51 13001.0 52 11982.0 53 10963.0 54 9897.0 55 8831.0 56 8403.0 57 7975.0 58 7672.0 59 7369.0 60 7284.5 61 7200.0 62 6508.5 63 5817.0 64 4938.0 65 4059.0 66 3584.0 67 3109.0 68 2697.0 69 2285.0 70 1985.0 71 1685.0 72 1420.5 73 1156.0 74 928.5 75 548.5 76 396.0 77 315.5 78 235.0 79 153.0 80 71.0 81 60.0 82 49.0 83 54.0 84 59.0 85 38.0 86 17.0 87 17.0 88 17.0 89 10.0 90 3.0 91 2.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 167415.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.276767314756743 #Duplication Level Percentage of deduplicated Percentage of total 1 65.83018219319354 20.58955290744557 2 5.981436919903747 3.7416002150344947 3 3.724074710668042 3.4943105456500314 4 3.0021771513693136 3.75593584804229 5 2.7710935411176045 4.33354239464803 6 2.471257782361254 4.637577278021682 7 2.3643099957984797 5.176358151897978 8 2.173331805507811 5.437983454290237 9 1.9938123066345823 5.612400322551743 >10 9.657767082999122 42.103156825851926 >50 0.024827164737786945 0.4969686109368933 >100 0.005729345708720065 0.6206134456291252 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 499 0.2980617029537377 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 436 0.2604306663082758 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.04838276140130813 0.0 2 0.0 0.0 0.0 0.1475375563718902 0.0 3 0.0 0.0 0.0 0.22996744616671147 0.0 4 0.0 0.0 0.0 0.41394140310008065 0.0 5 0.0 0.0 0.0 0.7018486993399635 0.0 6 0.0 0.0 0.0 1.1504345488755487 0.0 7 0.0 0.0 0.0 1.3750261326643372 0.0 8 0.0 0.0 0.0 1.9036525998267777 0.0 9 0.0 0.0 0.0 2.134217364035481 0.0 10 0.0 0.0 0.0 2.453782516500911 0.0 11 0.0 0.0 0.0 2.72795149777499 0.0 12 0.0 0.0 0.0 2.9734492130334798 0.0 13 0.0 0.0 0.0 3.083355732759908 0.0 14 0.0 0.0 0.0 3.1257653137413017 0.0 15 0.0 0.0 0.0 3.179523937520533 0.0 16 0.0 0.0 0.0 3.29719559179285 0.0 17 0.0 0.0 0.0 3.4244243347370307 0.0 18 0.0 0.0 0.0 3.5880894782426904 0.0 19 0.0 0.0 0.0 3.677687184541409 0.0 20 0.0 0.0 0.0 3.766687572798136 0.0 21 0.0 0.0 0.0 3.8921243616163426 0.0 22 0.0 0.0 0.0 4.008601379804677 0.0 23 0.0 0.0 0.0 4.150165755756652 0.0 24 0.0 0.0 0.0 4.274407908490876 0.0 25 0.0 0.0 0.0 4.359824388495655 0.0 26 0.0 0.0 0.0 4.451214048920348 0.0 27 0.0 0.0 0.0 4.521100259833348 0.0 28 0.0 0.0 0.0 4.607114057880119 0.0 29 0.0 0.0 0.0 4.709852761102649 0.0 30 0.0 0.0 0.0 4.846638592718693 0.0 31 0.0 0.0 0.0 4.968491473284951 0.0 32 0.0 0.0 0.0 5.077203356927396 0.0 33 0.0 0.0 0.0 5.184720604485858 0.0 34 0.0 0.0 0.0 5.301197622674193 0.0 35 0.0 0.0 0.0 5.462473494011887 0.0 36 0.0 0.0 0.0 5.595675417375982 0.0 37 0.0 0.0 0.0 5.718722934026222 0.0 38 0.0 0.0 0.0 5.817280410954813 0.0 39 0.0 0.0 0.0 5.948093062150942 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTACCT 35 1.2036253E-7 45.000004 8 CGACAAT 35 1.2036253E-7 45.000004 20 TATGCCC 35 1.2036253E-7 45.000004 10 TCATCGA 35 1.2036253E-7 45.000004 16 TTGTTAG 35 1.2036253E-7 45.000004 1 TTCATCG 35 1.2036253E-7 45.000004 15 TCGACAA 35 1.2036253E-7 45.000004 19 ACACGTG 25 3.8764912E-5 45.0 42 ACGTTAG 25 3.8764912E-5 45.0 1 GTTTAAG 20 7.016009E-4 45.0 1 GGATCGC 20 7.016009E-4 45.0 8 CACGAGG 20 7.016009E-4 45.0 2 TACGGGA 25 3.8764912E-5 45.0 4 ACGGGAA 20 7.016009E-4 45.0 5 ATGTATG 20 7.016009E-4 45.0 1 TACATTG 20 7.016009E-4 45.0 1 TCTACGG 25 3.8764912E-5 45.0 2 CTAAAGG 20 7.016009E-4 45.0 2 CTACGAA 25 3.8764912E-5 45.0 11 TACGAAT 25 3.8764912E-5 45.0 12 >>END_MODULE