##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545334_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 4983455 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.203239720234254 31.0 31.0 33.0 30.0 34.0 2 31.567925666028888 31.0 31.0 34.0 30.0 34.0 3 31.753064891726723 31.0 31.0 34.0 30.0 34.0 4 35.54166557137568 37.0 35.0 37.0 33.0 37.0 5 35.44921324663311 37.0 35.0 37.0 33.0 37.0 6 35.501226358018684 37.0 35.0 37.0 33.0 37.0 7 35.84372067170266 37.0 35.0 37.0 35.0 37.0 8 35.886048133273 37.0 35.0 37.0 35.0 37.0 9 37.78421035205495 39.0 37.0 39.0 35.0 39.0 10 37.151622117587095 39.0 37.0 39.0 33.0 39.0 11 36.76020130612196 39.0 35.0 39.0 32.0 39.0 12 35.97581838302944 37.0 35.0 39.0 32.0 39.0 13 35.612683569932905 37.0 35.0 39.0 30.0 39.0 14 36.58203033838973 38.0 35.0 41.0 31.0 41.0 15 36.85795517366967 38.0 35.0 41.0 31.0 41.0 16 36.959007957330805 38.0 35.0 41.0 32.0 41.0 17 36.909979120911096 38.0 35.0 41.0 32.0 41.0 18 36.85740334767746 38.0 35.0 41.0 32.0 41.0 19 36.80720504148226 38.0 35.0 41.0 31.0 41.0 20 36.691901301406354 38.0 35.0 41.0 31.0 41.0 21 36.55983549565512 38.0 35.0 40.0 31.0 41.0 22 36.44044362796494 38.0 35.0 40.0 31.0 41.0 23 36.36558130854999 38.0 35.0 40.0 31.0 41.0 24 36.24689036020191 38.0 35.0 40.0 31.0 41.0 25 36.09708505444516 38.0 35.0 40.0 30.0 41.0 26 35.93693852959443 37.0 34.0 40.0 30.0 41.0 27 35.808425279249036 37.0 34.0 40.0 30.0 41.0 28 35.7331800929275 37.0 34.0 40.0 30.0 41.0 29 35.867530658950464 37.0 35.0 40.0 30.0 41.0 30 35.860696444534966 37.0 35.0 40.0 30.0 41.0 31 35.761887485690146 37.0 34.0 40.0 30.0 41.0 32 35.62366912112179 37.0 34.0 40.0 29.0 41.0 33 35.45843636593488 37.0 34.0 40.0 29.0 41.0 34 35.32224972433784 37.0 34.0 40.0 28.0 41.0 35 35.18988512989482 37.0 34.0 40.0 27.0 41.0 36 35.02147987691271 37.0 34.0 40.0 27.0 41.0 37 34.92304615974259 36.0 34.0 40.0 26.0 41.0 38 34.88086939683412 36.0 33.0 40.0 27.0 41.0 39 34.80279605213652 36.0 33.0 40.0 26.0 41.0 40 34.638559192367545 36.0 33.0 40.0 25.0 41.0 41 34.57336546632808 36.0 33.0 40.0 25.0 41.0 42 34.49356741457483 36.0 33.0 40.0 25.0 41.0 43 34.37832808764201 35.0 33.0 40.0 25.0 41.0 44 34.249887878991586 35.0 33.0 40.0 24.0 41.0 45 34.21619900249927 35.0 33.0 40.0 24.0 41.0 46 34.2085055448479 35.0 33.0 40.0 24.0 41.0 47 34.17068640130191 35.0 33.0 40.0 24.0 41.0 48 34.09265840666767 35.0 33.0 39.0 24.0 41.0 49 34.05935681168988 35.0 33.0 39.0 24.0 41.0 50 33.92857324888055 35.0 33.0 39.0 24.0 41.0 51 33.68012533473263 35.0 33.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 3.0 10 4.0 11 6.0 12 12.0 13 16.0 14 68.0 15 169.0 16 415.0 17 1015.0 18 2329.0 19 4521.0 20 8020.0 21 12828.0 22 19182.0 23 27794.0 24 39835.0 25 54906.0 26 72862.0 27 88180.0 28 101516.0 29 119414.0 30 141849.0 31 173746.0 32 214917.0 33 281839.0 34 480256.0 35 678662.0 36 374745.0 37 467015.0 38 638431.0 39 978313.0 40 587.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.624142286827116 24.105244253233952 29.03435467963491 13.236258780304025 2 30.237375475448257 26.25574024446895 29.771393541227926 13.735490738854871 3 29.043103629911375 25.695506430779446 30.79845207792586 14.462937861383319 4 26.718752351531215 28.129420251612586 29.91733646636721 15.23449093048899 5 23.445882424944138 33.29260523070842 28.61111417681107 14.650398167536377 6 22.870779409064596 41.776398101317255 24.936595193495275 10.416227296122871 7 88.61189676640002 4.371806307070095 5.155981141597546 1.8603157849323413 8 90.11105748923187 2.9627637853657753 4.973557501773368 1.9526212236289884 9 85.48260192978566 4.69511613930496 6.778510089887438 3.0437718410219414 10 53.10903780610039 21.486619223008937 12.562930737811417 12.841412233079257 11 42.66385469518637 21.799715257788023 18.908267457015263 16.628162590010344 12 38.10912308829918 21.208559122135146 24.198954339910763 16.48336344965491 13 23.107382328123762 34.51027449831493 24.995831205458863 17.38651196810245 14 18.317552782156156 36.484166105643574 27.713423719086457 17.484857393113813 15 17.75856308524909 21.95129684124769 42.784012296689745 17.506127776813475 16 19.458749000442463 18.091123527753336 41.210926957301716 21.23920051450249 17 20.510308611194443 19.409024461944576 27.089438953497126 32.99122797336386 18 23.992190157230276 22.37166784891205 31.393260298327164 22.24288169553051 19 30.433243603082598 23.70843119883695 24.21310115171101 21.645224046369435 20 32.07981209823305 22.95923209901564 23.19433003809606 21.766625764655245 21 25.50814645662497 25.698375925938933 25.73866925656999 23.054808360866105 22 24.814731948015986 24.246792636835288 23.839605253784775 27.09887016136395 23 23.1770328015403 27.6750567628282 24.427911960677882 24.719998474953623 24 23.393910449677985 23.041785267449992 33.51672684914382 20.047577433728208 25 21.772164090977043 24.1833426809312 30.92635530971986 23.118137918371893 26 20.90124221047446 29.859806098379536 25.697452871551967 23.541498819594036 27 22.040652519185986 28.451385635066433 27.319500226248657 22.188461619498923 28 19.643841471428956 26.3989942720462 33.636222259456545 20.3209419970683 29 19.569013866885523 24.527782432067713 32.59064243582013 23.312561265226638 30 21.95844047954682 27.428460776710136 28.70578745067428 21.907311293068766 31 28.865977519612397 25.171291804581358 22.758006242656954 23.20472443314929 32 29.639717826287182 25.17141220297966 24.14812614942846 21.040743821304698 33 27.46923570093439 25.79535683576956 24.174132203461255 22.561275259834794 34 21.79491938825574 25.76110349145322 27.050630536445098 25.393346583845943 35 22.867247722714463 24.764445550326027 28.76682943861237 23.60147728834714 36 29.393543234563168 25.03813117606159 24.31082451833116 21.257501071044086 37 23.448852252102206 29.872187067004717 26.039705385119362 20.639255295773715 38 23.369489641222806 29.548977566768436 23.805030847072963 23.27650194493579 39 22.97488389079464 28.584907458781107 25.943306400880513 22.49690224954374 40 25.211464736814115 24.41639384724052 25.211545002412983 25.160596413532378 41 20.158745288158517 23.811873489376346 26.29468912631899 29.734692096146148 42 22.96994755646434 25.77358479207698 24.291881836998627 26.964585814460047 43 23.122733123907008 25.201872997749554 26.083991929294033 25.591401949049402 44 21.841192506002365 27.750225496166813 27.07599446568696 23.332587532143865 45 20.165126403268417 31.585998067605708 23.49283780028113 24.75603772884475 46 22.843288441452767 29.040374599549914 25.653086061778424 22.4632508972189 47 23.586588019757375 25.403740978899176 27.174821484291524 23.834849517051925 48 24.052730485175445 22.93302538098568 29.233754493619386 23.78048964021949 49 21.47355599679339 23.390298497728985 30.26328119748247 24.872864307995158 50 20.963106920800932 28.973513355693992 26.50049012181308 23.562889601692 51 20.65538868114591 29.938506518068287 24.531976309608496 24.874128491177306 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1541.0 1 3991.5 2 6442.0 3 15519.5 4 24597.0 5 18534.5 6 12472.0 7 12535.0 8 12598.0 9 13173.5 10 13749.0 11 13815.0 12 13881.0 13 13979.0 14 14077.0 15 13948.0 16 13819.0 17 13566.0 18 13313.0 19 13323.5 20 13334.0 21 13267.5 22 13201.0 23 14949.0 24 16697.0 25 18594.0 26 23335.0 27 26179.0 28 35902.5 29 45626.0 30 55098.0 31 64570.0 32 74195.0 33 83820.0 34 92035.0 35 100250.0 36 109830.5 37 119411.0 38 142679.0 39 165947.0 40 214623.0 41 263299.0 42 321515.5 43 379732.0 44 393530.0 45 407328.0 46 396645.0 47 385962.0 48 382812.5 49 379663.0 50 370961.0 51 362259.0 52 341376.0 53 320493.0 54 303736.0 55 286979.0 56 275845.5 57 264712.0 58 259706.5 59 254701.0 60 243023.5 61 231346.0 62 210983.5 63 190621.0 64 168180.5 65 145740.0 66 126816.5 67 107893.0 68 91975.0 69 76057.0 70 64296.5 71 52536.0 72 44355.0 73 36174.0 74 28319.5 75 16047.0 76 11629.0 77 8352.5 78 5076.0 79 3914.0 80 2752.0 81 1893.0 82 1034.0 83 769.0 84 504.0 85 398.5 86 293.0 87 189.5 88 86.0 89 70.0 90 54.0 91 40.5 92 27.0 93 24.5 94 22.0 95 12.5 96 3.0 97 1.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 4983455.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 15.660015515784249 #Duplication Level Percentage of deduplicated Percentage of total 1 79.26111689982773 12.412303204496915 2 8.985954748940241 2.8144038158507865 3 3.018093169531749 1.4179015758884896 4 1.3679353459522399 0.8568755496880709 5 0.7897413650770185 0.6183681015281371 6 0.4748239657765786 0.4461450402796458 7 0.36604026223571406 0.4012537330209113 8 0.25569526900958006 0.3203353504002121 9 0.20860041592603162 0.2940017175000632 >10 2.0968581783188682 7.707292521357447 >50 1.0481211811010895 12.196118365561672 >100 2.109710243598695 57.826181625002945 >500 0.013821329502864655 1.3940093594230278 >1k 0.0032292825941272556 0.8452170397035697 >5k 0.0 0.0 >10k+ 2.583426075301805E-4 0.44959300029799776 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 12060 0.24200078058294897 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 10166 0.20399501951959031 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.041316717016607954 0.0 2 0.0 0.0 0.0 0.1489328186970686 0.0 3 0.0 0.0 0.0 0.22303803285070298 0.0 4 0.0 0.0 0.0 0.37578346749393743 0.0 5 0.0 0.0 0.0 0.643609704512231 0.0 6 0.0 0.0 0.0 1.0217208743733013 0.0 7 0.0 0.0 0.0 1.2278027994634244 0.0 8 0.0 0.0 0.0 1.7131889422097721 0.0 9 0.0 0.0 0.0 1.9312304415310262 0.0 10 0.0 0.0 0.0 2.2221731710229147 0.0 11 0.0 0.0 0.0 2.549877544795729 0.0 12 0.0 0.0 0.0 2.8178442466120392 0.0 13 0.0 0.0 0.0 2.9329651817865314 0.0 14 0.0 0.0 0.0 2.9786764403410886 0.0 15 0.0 0.0 0.0 3.0472433281729243 0.0 16 2.0066399716662436E-5 0.0 0.0 3.196818271660926 0.0 17 2.0066399716662436E-5 0.0 0.0 3.365576693278057 0.0 18 2.0066399716662436E-5 0.0 0.0 3.579464447857962 0.0 19 2.0066399716662436E-5 0.0 0.0 3.6929198718559713 2.0066399716662436E-5 20 2.0066399716662436E-5 0.0 0.0 3.815766370921379 2.0066399716662436E-5 21 2.0066399716662436E-5 0.0 0.0 3.9770801582436284 2.0066399716662436E-5 22 2.0066399716662436E-5 0.0 0.0 4.149992324602108 2.0066399716662436E-5 23 2.0066399716662436E-5 0.0 0.0 4.3510777161627825 2.0066399716662436E-5 24 2.0066399716662436E-5 0.0 0.0 4.510705925908832 2.0066399716662436E-5 25 2.0066399716662436E-5 0.0 0.0 4.6364620529331555 2.0066399716662436E-5 26 4.013279943332487E-5 0.0 0.0 4.756338724840497 2.0066399716662436E-5 27 4.013279943332487E-5 0.0 0.0 4.8730649719923225 2.0066399716662436E-5 28 4.013279943332487E-5 0.0 0.0 4.996493396649513 2.0066399716662436E-5 29 4.013279943332487E-5 0.0 0.0 5.1355736130857 2.0066399716662436E-5 30 4.013279943332487E-5 0.0 0.0 5.303750109111048 2.0066399716662436E-5 31 4.013279943332487E-5 0.0 0.0 5.461070682889682 2.0066399716662436E-5 32 6.019919914998731E-5 0.0 0.0 5.608438322408851 2.0066399716662436E-5 33 6.019919914998731E-5 0.0 0.0 5.758274129093169 2.0066399716662436E-5 34 8.026559886664974E-5 0.0 0.0 5.916236827662736 2.0066399716662436E-5 35 8.026559886664974E-5 0.0 0.0 6.113248740080928 2.0066399716662436E-5 36 8.026559886664974E-5 0.0 0.0 6.27616783938051 2.0066399716662436E-5 37 8.026559886664974E-5 0.0 0.0 6.444023273010392 2.0066399716662436E-5 38 8.026559886664974E-5 0.0 0.0 6.60738383310374 2.0066399716662436E-5 39 8.026559886664974E-5 0.0 0.0 6.790148601723102 2.0066399716662436E-5 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACGCTA 20 7.0355553E-4 45.0 12 ACTACGT 20 7.0355553E-4 45.0 14 TACGTTA 30 2.1669657E-6 44.999996 12 TACGTAG 235 0.0 44.042553 1 TATCACG 155 0.0 40.64516 1 CGTTAGG 775 0.0 39.774193 2 ACGTTAC 40 3.4613186E-7 39.375 18 ACGTATG 215 0.0 38.720932 1 AGTCGAC 35 6.252487E-6 38.571426 37 TCTTACG 190 0.0 37.894737 1 GGGCGAT 10570 0.0 37.76254 7 AGGGCGA 5880 0.0 37.57653 6 CGACGAA 30 1.1404685E-4 37.499996 45 GGCGATA 2650 0.0 37.18868 8 ATACTAT 3155 0.0 36.94136 45 GGTACCT 1695 0.0 36.902657 8 TACGGGA 1335 0.0 36.741573 4 CGTTTTT 10505 0.0 36.71109 1 GCGATAA 570 0.0 36.710526 9 TATAGCG 270 0.0 36.666668 1 >>END_MODULE