##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545333_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2700930 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.2872088502849 31.0 31.0 33.0 30.0 34.0 2 31.653615236233446 31.0 31.0 34.0 30.0 34.0 3 31.843255471263603 31.0 31.0 34.0 30.0 34.0 4 35.61910675211872 37.0 35.0 37.0 33.0 37.0 5 35.53980925088766 37.0 35.0 37.0 33.0 37.0 6 35.5895828473896 37.0 35.0 37.0 33.0 37.0 7 35.90886213267282 37.0 35.0 37.0 35.0 37.0 8 35.961751692935394 37.0 35.0 37.0 35.0 37.0 9 37.89573072978567 39.0 38.0 39.0 35.0 39.0 10 37.257179564076075 39.0 37.0 39.0 34.0 39.0 11 36.89216899364293 39.0 37.0 39.0 33.0 39.0 12 35.965413394645545 37.0 35.0 39.0 32.0 39.0 13 35.517282935877645 37.0 35.0 39.0 31.0 39.0 14 36.347524371235096 38.0 35.0 41.0 31.0 41.0 15 36.686143291384816 38.0 35.0 41.0 31.0 41.0 16 36.833775403287014 38.0 35.0 41.0 32.0 41.0 17 36.82973901582048 38.0 35.0 41.0 32.0 41.0 18 36.80231957140688 38.0 35.0 40.0 32.0 41.0 19 36.77273050393753 38.0 35.0 40.0 32.0 41.0 20 36.637238284590865 38.0 35.0 40.0 31.0 41.0 21 36.51641249495544 38.0 35.0 40.0 31.0 41.0 22 36.41906972783449 38.0 35.0 40.0 31.0 41.0 23 36.38559940464951 38.0 35.0 40.0 31.0 41.0 24 36.30057980029101 37.0 35.0 40.0 31.0 41.0 25 36.1879619242261 37.0 35.0 40.0 31.0 41.0 26 36.03951342685667 37.0 35.0 40.0 31.0 41.0 27 35.91187887135172 37.0 34.0 40.0 30.0 41.0 28 35.898728586079606 37.0 35.0 40.0 30.0 41.0 29 36.028908931368086 37.0 35.0 40.0 30.0 41.0 30 36.030946747971996 37.0 35.0 40.0 30.0 41.0 31 35.88183884810047 37.0 35.0 40.0 30.0 41.0 32 35.79846904584717 37.0 34.0 40.0 30.0 41.0 33 35.63781586342482 37.0 34.0 40.0 30.0 41.0 34 35.52274401780127 37.0 34.0 40.0 29.0 41.0 35 35.401822335269706 37.0 34.0 40.0 29.0 41.0 36 35.24101254012507 36.0 34.0 40.0 28.0 41.0 37 35.11470678618105 36.0 34.0 40.0 27.0 41.0 38 35.05738652982491 36.0 34.0 40.0 28.0 41.0 39 35.01920671768613 36.0 34.0 40.0 27.0 41.0 40 34.85139488990829 36.0 34.0 40.0 27.0 41.0 41 34.81809339745939 36.0 34.0 40.0 27.0 41.0 42 34.79036554075818 36.0 34.0 40.0 27.0 41.0 43 34.65220683246141 35.0 33.0 40.0 27.0 41.0 44 34.556960010070604 35.0 33.0 40.0 26.0 41.0 45 34.52768120610308 35.0 33.0 40.0 26.0 41.0 46 34.57885617176306 35.0 34.0 40.0 27.0 41.0 47 34.54781612259481 35.0 33.0 40.0 27.0 41.0 48 34.49575035265631 35.0 34.0 40.0 27.0 41.0 49 34.46771519439601 35.0 34.0 40.0 27.0 41.0 50 34.316658336202714 35.0 34.0 39.0 26.0 41.0 51 34.10056313936311 35.0 33.0 39.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 4.0 11 6.0 12 4.0 13 4.0 14 23.0 15 85.0 16 173.0 17 433.0 18 1069.0 19 2020.0 20 3567.0 21 5589.0 22 8705.0 23 12987.0 24 18660.0 25 26286.0 26 35136.0 27 42866.0 28 49882.0 29 58609.0 30 71738.0 31 90349.0 32 114418.0 33 153604.0 34 276827.0 35 405191.0 36 192250.0 37 239020.0 38 345462.0 39 545703.0 40 260.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.983553812945914 23.699207310074677 29.52834764321919 12.788891233760225 2 29.153624862547346 25.484444246981596 31.534360386977816 13.827570503493241 3 28.999677888727216 25.450752148334093 31.209657414298036 14.339912548640655 4 25.484481271265825 28.036454110250915 30.642778598482746 15.836286020000518 5 23.652519687663137 32.704772059994156 28.78301177742481 14.8596964749179 6 21.374193333407383 41.68112464965771 25.868978462973864 11.075703553961043 7 90.1487635740282 3.7524482307945783 4.5411765577041985 1.5576116374730185 8 91.97887394341949 2.2889152995449713 4.023873258470231 1.7083374985653088 9 88.4034388155191 3.1852732207054606 5.865979495951394 2.5453084678240456 10 53.700873402864936 19.58469860381424 13.199453521564793 13.514974471756025 11 47.40892951687011 21.30392124194259 17.130729045180733 14.156420196006561 12 41.31869393134957 21.189812397951815 21.03597649698437 16.45551717371424 13 23.73911948847249 37.11847400710126 22.519502541717113 16.62290396270914 14 18.638765166072428 38.549129373956376 26.484099921138277 16.328005538832922 15 18.21535545164073 22.049627350579247 44.09296057283972 15.642056624940299 16 19.672261036013523 17.800979662560675 41.919561040086194 20.60719826133961 17 20.94771060338476 18.090990880918795 26.331782015824178 34.62951649987227 18 24.348724328286924 22.68785196210194 31.40418300363208 21.55924070597905 19 31.279559262920547 23.79687737186821 23.2368480486351 21.68671531657614 20 31.89149663264135 24.111546763522192 22.071841921116057 21.925114682720395 21 25.25822587034836 26.927317627631965 26.480360468431247 21.33409603358843 22 24.594639624129467 24.34313366136849 24.379454484196184 26.682772230305858 23 22.77600678284887 30.105074918639136 23.57332474369939 23.5455935548126 24 22.552639276101193 24.992317461022683 33.52415649424457 18.930886768631545 25 20.543479468183182 24.48623251990981 31.883129144405814 23.087158867501195 26 19.715542424276084 31.659243297678945 25.450900245471004 23.174314032573964 27 20.824271639768526 30.180197191337797 27.606565146079316 21.388966022814365 28 17.847667284972214 27.61152640016587 34.75362190060461 19.78718441425731 29 18.5726768187254 25.113238773311412 34.0213185828585 22.292765825104684 30 22.206573291421844 27.39330526892589 29.86071464273417 20.5394067969181 31 28.746061541765243 25.17943819351112 24.495414542398358 21.57908572232527 32 31.217247392564783 25.281069853717053 24.42355040671176 19.078132347006402 33 28.386148474784612 25.10205743947455 25.00068494925822 21.51110913648262 34 21.223948788010055 26.018149304128578 28.738730733488094 24.019171174373273 35 21.339279433380355 25.30013736009449 29.756343185495364 23.604240021029792 36 30.955300581651507 24.397596383467917 24.71607927639739 19.93102375848319 37 23.33529562039742 29.46100047020841 26.77459245519136 20.42911145420281 38 23.37109810324592 31.033495869941095 22.978603666144622 22.616802360668363 39 22.38984349835057 29.27332437345655 24.60904207069417 23.727790057498712 40 25.113905210427518 24.18059705360746 24.585124383082864 26.120373352882154 41 19.44859733499202 23.915614251387485 25.505437016138888 31.130351397481608 42 23.50986512053256 25.99841536063504 23.68210209076133 26.80961742807107 43 22.716434709525977 26.26106563294865 25.77934267085781 25.243156986667554 44 22.57918568789269 28.6647562136005 26.705542165106095 22.050515933400717 45 19.93046839421977 31.474603192233786 23.032955315391366 25.56197309815508 46 22.529017782763713 29.386470586057396 26.624162788372896 21.460348842805995 47 23.801616480249397 25.639427900760108 26.885406137885838 23.673549481104654 48 24.61026387207369 23.516677588830515 28.386333596205755 23.486724942890042 49 22.41309474884577 22.57107736964675 30.630190341845214 24.385637539662262 50 20.06283021033496 30.46406237851407 25.938361971617184 23.53474543953379 51 20.040319445524318 31.94847700606828 23.733565845838285 24.277637702569116 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 532.0 1 1297.0 2 2062.0 3 6085.0 4 10108.0 5 7557.5 6 5007.0 7 5259.5 8 5512.0 9 6024.5 10 6537.0 11 6581.5 12 6626.0 13 6520.0 14 6414.0 15 6207.5 16 6001.0 17 5919.5 18 5838.0 19 5587.5 20 5337.0 21 5874.0 22 6411.0 23 7227.5 24 8044.0 25 7888.5 26 11053.5 27 14374.0 28 14935.0 29 15496.0 30 18972.0 31 22448.0 32 28211.5 33 33975.0 34 41260.5 35 48546.0 36 55087.5 37 61629.0 38 77129.5 39 92630.0 40 126127.0 41 159624.0 42 200065.5 43 240507.0 44 240955.0 45 241403.0 46 241720.0 47 242037.0 48 234575.5 49 227114.0 50 216515.0 51 205916.0 52 198927.5 53 191939.0 54 177388.5 55 162838.0 56 155817.0 57 148796.0 58 139560.5 59 130325.0 60 119722.0 61 109119.0 62 100405.5 63 91692.0 64 77633.5 65 63575.0 66 53667.5 67 43760.0 68 36401.5 69 29043.0 70 22908.5 71 16774.0 72 14375.0 73 11976.0 74 9149.0 75 5052.5 76 3783.0 77 2647.0 78 1511.0 79 1188.0 80 865.0 81 598.5 82 332.0 83 286.5 84 241.0 85 179.0 86 117.0 87 80.0 88 43.0 89 26.5 90 10.0 91 6.5 92 3.0 93 4.0 94 5.0 95 2.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2700930.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.17851870406691 #Duplication Level Percentage of deduplicated Percentage of total 1 78.98159021673851 12.77805134598452 2 8.069873536797168 2.6111719990905513 3 2.584457834808398 1.254380982609598 4 1.284633806164116 0.8313388824361128 5 0.7776329785479272 0.629047484416845 6 0.5571940532400951 0.5408744647283839 7 0.40579361462216457 0.4595597708908926 8 0.3258818253132291 0.42178281649164334 9 0.24811379606683184 0.3612702321363853 >10 3.0387598527958675 12.163924173602013 >50 1.766881326408197 21.251428556022834 >100 1.9520267245362797 45.42716941288183 >500 0.005774543517126628 0.6413714261666271 >1k 9.239269627402605E-4 0.20153330427760996 >5k 4.6196348137013025E-4 0.4270951482641952 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 5774 0.21377821713261727 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5655 0.20937232730948227 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0347287786058876 0.0 2 0.0 0.0 0.0 0.12543827496454923 0.0 3 0.0 0.0 0.0 0.19485880789209642 0.0 4 0.0 0.0 0.0 0.3553220557363575 0.0 5 0.0 0.0 0.0 0.5936473733121554 0.0 6 0.0 0.0 0.0 0.9400836008337868 0.0 7 0.0 0.0 0.0 1.1437171640879253 0.0 8 0.0 0.0 0.0 1.696526751896569 0.0 9 0.0 0.0 0.0 1.946736864709563 0.0 10 0.0 0.0 0.0 2.3052800331737586 0.0 11 0.0 0.0 0.0 2.6435338938809965 0.0 12 0.0 0.0 0.0 2.919216714242872 0.0 13 0.0 0.0 0.0 3.0348805781712227 0.0 14 0.0 0.0 0.0 3.080642593477062 0.0 15 0.0 0.0 0.0 3.1383264283043246 0.0 16 0.0 0.0 0.0 3.2714657543883034 0.0 17 0.0 0.0 0.0 3.4186002599104754 0.0 18 0.0 0.0 0.0 3.6230853817018582 0.0 19 0.0 0.0 0.0 3.722680706275246 0.0 20 0.0 0.0 0.0 3.8394552987304373 0.0 21 0.0 0.0 0.0 3.99951127944819 0.0 22 0.0 0.0 0.0 4.155050297490123 0.0 23 0.0 0.0 0.0 4.342171029978563 0.0 24 0.0 0.0 0.0 4.472422461892755 0.0 25 0.0 0.0 0.0 4.585272480219776 0.0 26 0.0 0.0 0.0 4.701898975538056 0.0 27 0.0 0.0 0.0 4.81523030956004 0.0 28 0.0 0.0 0.0 4.929265104982358 0.0 29 0.0 0.0 0.0 5.0665141266156475 0.0 30 0.0 0.0 0.0 5.233493648484041 0.0 31 0.0 0.0 0.0 5.386922282324977 0.0 32 0.0 0.0 0.0 5.529095533760594 0.0 33 0.0 0.0 0.0 5.671194736627754 0.0 34 0.0 0.0 0.0 5.826992924659284 0.0 35 0.0 0.0 0.0 6.023332703920501 0.0 36 0.0 0.0 0.0 6.187091113061057 0.0 37 0.0 0.0 0.0 6.348739138000615 0.0 38 0.0 0.0 0.0 6.564109399355037 0.0 39 0.0 0.0 0.0 6.966600393197899 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACCCGTC 20 7.034981E-4 45.0 14 CGACTAA 35 1.2127384E-7 45.0 21 TATACGT 25 3.89221E-5 45.0 18 TTCGATC 25 3.89221E-5 45.0 44 TAATGCG 100 0.0 45.0 1 TACGTAA 20 7.034981E-4 45.0 42 CGTAAAA 30 2.1665965E-6 44.999996 35 TATAACG 30 2.1665965E-6 44.999996 1 GCGTAAG 215 0.0 42.906975 1 CGTAAGG 435 0.0 42.413795 2 GTATACG 240 0.0 41.249996 1 TACGGGA 585 0.0 39.23077 4 TCGTAAG 150 0.0 39.000004 1 CGTTTTT 4970 0.0 38.97887 1 TAGTACG 145 0.0 38.793106 1 AACACGT 385 0.0 38.571426 41 TATGTCG 100 0.0 38.25 1 AGGGTAC 1170 0.0 38.076923 6 TATACGG 355 0.0 38.028168 2 CATACGA 290 0.0 38.017242 18 >>END_MODULE