##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545332_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2200500 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.193192910702113 31.0 31.0 33.0 30.0 34.0 2 31.56206952965235 31.0 31.0 34.0 30.0 34.0 3 31.704274028629857 31.0 31.0 34.0 30.0 34.0 4 35.50197091570098 37.0 35.0 37.0 33.0 37.0 5 35.412610770279485 37.0 35.0 37.0 33.0 37.0 6 35.46552238127698 37.0 35.0 37.0 33.0 37.0 7 35.85680754374006 37.0 35.0 37.0 35.0 37.0 8 35.90971824585321 37.0 35.0 37.0 35.0 37.0 9 37.789542831174735 39.0 37.0 39.0 35.0 39.0 10 37.11316109975006 39.0 37.0 39.0 33.0 39.0 11 36.74729152465349 39.0 35.0 39.0 32.0 39.0 12 36.13598454896614 38.0 35.0 39.0 32.0 39.0 13 35.888801181549645 38.0 35.0 39.0 31.0 39.0 14 36.86477800499886 39.0 35.0 41.0 31.0 41.0 15 37.0794124062713 39.0 35.0 41.0 32.0 41.0 16 37.134982049534194 39.0 35.0 41.0 32.0 41.0 17 37.063122017723245 39.0 35.0 41.0 32.0 41.0 18 36.99253624176323 38.0 35.0 41.0 32.0 41.0 19 36.94649352419905 38.0 35.0 41.0 32.0 41.0 20 36.82440718018632 38.0 35.0 41.0 31.0 41.0 21 36.714096341740515 38.0 35.0 41.0 31.0 41.0 22 36.5940295387412 38.0 35.0 41.0 31.0 41.0 23 36.48881799591002 38.0 35.0 40.0 31.0 41.0 24 36.40886162235856 38.0 35.0 40.0 31.0 41.0 25 36.28938604862531 38.0 35.0 40.0 30.0 41.0 26 36.13644262667576 38.0 35.0 40.0 30.0 41.0 27 35.98861258804817 38.0 35.0 40.0 30.0 41.0 28 35.903898659395594 38.0 35.0 40.0 30.0 41.0 29 36.02900477164281 38.0 35.0 40.0 30.0 41.0 30 35.999218813905934 38.0 35.0 40.0 30.0 41.0 31 35.87446171324699 38.0 35.0 40.0 30.0 41.0 32 35.71666666666667 38.0 34.0 40.0 29.0 41.0 33 35.52971824585322 38.0 34.0 40.0 29.0 41.0 34 35.342905703249265 38.0 34.0 40.0 27.0 41.0 35 35.20217859577369 37.0 34.0 40.0 27.0 41.0 36 35.056200863440125 37.0 34.0 40.0 26.0 41.0 37 34.93614451261077 37.0 34.0 40.0 26.0 41.0 38 34.86895841854124 37.0 34.0 40.0 26.0 41.0 39 34.7999704612588 37.0 34.0 40.0 25.0 41.0 40 34.69367552828903 37.0 33.0 40.0 24.0 41.0 41 34.63842354010452 37.0 33.0 40.0 24.0 41.0 42 34.565600545330604 36.0 33.0 40.0 24.0 41.0 43 34.44014814814815 36.0 33.0 40.0 24.0 41.0 44 34.31948102703931 36.0 33.0 40.0 23.0 41.0 45 34.2855237446035 36.0 33.0 40.0 23.0 41.0 46 34.287775960009085 36.0 33.0 40.0 23.0 41.0 47 34.246850261304246 36.0 33.0 40.0 23.0 41.0 48 34.1705335151102 36.0 33.0 40.0 23.0 41.0 49 34.12055714610316 36.0 33.0 40.0 24.0 41.0 50 33.98933242444899 35.0 33.0 40.0 24.0 41.0 51 33.75456941604181 35.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 0.0 10 0.0 11 4.0 12 6.0 13 10.0 14 27.0 15 65.0 16 187.0 17 503.0 18 1094.0 19 2099.0 20 3737.0 21 5989.0 22 9153.0 23 13506.0 24 18821.0 25 26579.0 26 34467.0 27 40684.0 28 45271.0 29 51669.0 30 60447.0 31 73315.0 32 91181.0 33 116689.0 34 193378.0 35 266444.0 36 167776.0 37 208767.0 38 295178.0 39 473212.0 40 241.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.932106339468305 23.799772778913884 28.202772097250623 15.065348784367188 2 31.642263122017724 25.04517155192002 29.915928198136786 13.39663712792547 3 28.920608952510797 25.26943876391729 32.22281299704613 13.58713928652579 4 25.942104067257443 28.25498750284026 30.984367189275165 14.81854124062713 5 24.23694614860259 32.27511929107021 29.37414224039991 14.11379231992729 6 22.546784821631448 40.755691888207224 26.039218359463757 10.65830493069757 7 88.57577823221995 3.6238127698250397 6.253624176323563 1.5467848216314475 8 89.55010224948875 2.821404226312202 5.701204271756419 1.9272892524426266 9 84.804271756419 4.699295614633038 7.719381958645763 2.777050670302204 10 46.64180867984549 27.634764826175868 13.341195182912974 12.382231311065667 11 37.482163144739836 23.68198136787094 23.37864121790502 15.457214269484206 12 33.43217450579414 22.72138150420359 26.80322653942286 17.043217450579416 13 22.90611224721654 32.161781413315154 27.75669166098614 17.175414678482163 14 19.589093387866395 33.78454896614406 29.12047261985912 17.505885026130425 15 19.03290161326971 24.331379231992727 39.80608952510793 16.82962962962963 16 21.135287434673938 20.985730515791865 38.42208588957055 19.456896159963645 17 21.059486480345377 21.914928425357875 28.848670756646218 28.176914337650533 18 24.267302885707796 23.63340149965917 30.69911383776415 21.400181776868894 19 27.99295614633038 25.292615314701205 25.806589411497388 20.90783912747103 20 29.877527834583052 24.311020222676664 25.126607589184275 20.68484435355601 21 25.708702567598273 26.193592365371504 27.092569870483977 21.00513519654624 22 25.34401272438082 23.569688707112018 26.283571915473757 24.802726653033403 23 22.773687798227677 28.36100886162236 26.186139513746877 22.67916382640309 24 22.738104976141784 24.935696432628948 32.99531924562599 19.33087934560327 25 21.513565098841173 25.89861395137469 30.680209043399227 21.907611906384915 26 21.32006362190411 30.1702340377187 26.864667121108837 21.64503521926835 27 21.65748693478755 28.668847989093386 28.391547375596453 21.28211770052261 28 20.129152465348785 27.549147920927062 32.91979095660078 19.401908657123382 29 20.769779595546467 24.60618041354238 32.22008634401272 22.403953646898433 30 22.82326743921836 26.97196091797319 29.414996591683707 20.789775051124746 31 27.238900249943192 26.045807770961144 25.4595319245626 21.25576005453306 32 28.05712338104976 26.215587366507613 26.089843217450582 19.63744603499205 33 26.62026812088162 26.994274028629857 25.451760963417403 20.93369688707112 34 22.01854124062713 26.814633037945924 28.893069756873434 22.27375596455351 35 22.825221540558964 26.39404680754374 28.905748693478756 21.87498295841854 36 27.499522835719155 26.303067484662577 25.819768234492162 20.37764144512611 37 23.11233810497614 29.480708929788683 27.516291751874572 19.8906612133606 38 23.01299704612588 29.242990229493298 25.584185412406274 22.15982731197455 39 22.71438309475119 29.070756646216765 26.30688479890934 21.9079754601227 40 24.29347875482845 26.112883435582823 26.221313337877756 23.372324471710975 41 20.303567371052033 25.78509429675074 26.9634174051352 26.94792092706203 42 23.508066348557147 26.74587593728698 25.040172688025446 24.705885026130424 43 23.288525335151103 26.684753465121563 26.428902522154058 23.59781867757328 44 22.626539422858443 28.93197000681663 26.688707112019994 21.75278345830493 45 20.957555101113385 30.209406952965235 24.869120654396728 23.963917291524652 46 23.65071574642127 28.48234492160873 26.389047943649167 21.477891388320835 47 23.058895705521472 26.370824812542605 27.562872074528517 23.007407407407406 48 24.20295387411952 24.222176778005 28.376050897523292 23.198818450352192 49 22.51624630765735 24.70802090433992 28.967598273119744 23.80813451488298 50 21.220995228357193 28.589184276300838 27.50824812542604 22.68157236991593 51 20.93583276528062 29.593047034764826 25.585866848443533 23.88525335151102 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 749.0 1 1725.0 2 2701.0 3 9188.0 4 15675.0 5 11649.5 6 7624.0 7 7717.0 8 7810.0 9 8071.0 10 8332.0 11 8590.0 12 8848.0 13 8629.5 14 8411.0 15 8221.0 16 8031.0 17 7992.5 18 7954.0 19 8071.0 20 8188.0 21 8051.0 22 7914.0 23 9219.0 24 10524.0 25 11526.0 26 14409.0 27 16290.0 28 18873.0 29 21456.0 30 26339.5 31 31223.0 32 37124.5 33 43026.0 34 47582.0 35 52138.0 36 59429.0 37 66720.0 38 74599.5 39 82479.0 40 100430.0 41 118381.0 42 143178.5 43 167976.0 44 181279.5 45 194583.0 46 191443.0 47 188303.0 48 181107.0 49 173911.0 50 162904.0 51 151897.0 52 145421.0 53 138945.0 54 128262.0 55 117579.0 56 110838.5 57 104098.0 58 98360.5 59 92623.0 60 88677.0 61 84731.0 62 76691.0 63 68651.0 64 60281.5 65 51912.0 66 45061.5 67 38211.0 68 32266.0 69 26321.0 70 23037.0 71 19753.0 72 16600.5 73 13448.0 74 11009.0 75 7275.5 76 5981.0 77 4444.0 78 2907.0 79 2296.0 80 1685.0 81 1180.0 82 675.0 83 543.5 84 412.0 85 291.5 86 171.0 87 123.5 88 76.0 89 68.5 90 61.0 91 36.5 92 12.0 93 7.0 94 2.0 95 2.0 96 2.0 97 2.0 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2200500.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.841755506057986 #Duplication Level Percentage of deduplicated Percentage of total 1 78.97576498230579 16.45993584665113 2 6.774374358264108 2.82379708162898 3 2.278262977196042 1.42448999847671 4 1.2447625593094915 1.0377214769689371 5 0.7507234849829796 0.7823197663335527 6 0.5709068390827942 0.7139220454139992 7 0.4505019227976822 0.6572475650970813 8 0.394379748548786 0.6575653036635539 9 0.34093419931322433 0.6395100503165878 >10 5.433512249351075 29.16009364126194 >50 2.4257186466567306 35.18372956449834 >100 0.35730138021677776 9.577365603144345 >500 0.001977682136232828 0.2604084865567006 >1k 6.592273787442759E-4 0.2404404773870345 >5k 2.1974245958142536E-4 0.38145309260125915 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8329 0.3785048852533515 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 3063 0.13919563735514656 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0359918200408998 0.0 2 0.0 0.0 0.0 0.11515564644399 0.0 3 0.0 0.0 0.0 0.1907293796864349 0.0 4 0.0 0.0 0.0 0.3289706884798909 0.0 5 0.0 0.0 0.0 0.5577823221995001 0.0 6 0.0 0.0 0.0 1.0518064076346285 0.0 7 0.0 0.0 0.0 1.3110202226766643 0.0 8 0.0 0.0 0.0 1.9428311747330151 0.0 9 0.0 0.0 0.0 2.2910702113156103 0.0 10 0.0 0.0 0.0 2.6885707793683253 0.0 11 0.0 0.0 0.0 3.045171551920018 0.0 12 0.0 0.0 0.0 3.3323790047716426 0.0 13 0.0 0.0 0.0 3.4877982276755284 0.0 14 0.0 0.0 0.0 3.5670074982958417 0.0 15 0.0 0.0 0.0 3.6439445580549874 0.0 16 0.0 0.0 0.0 3.7810043172006362 0.0 17 0.0 0.0 0.0 3.935650988411725 0.0 18 0.0 0.0 0.0 4.130015905476029 0.0 19 4.544421722335833E-5 0.0 0.0 4.251579186548511 0.0 20 4.544421722335833E-5 0.0 0.0 4.376550783912747 0.0 21 4.544421722335833E-5 0.0 0.0 4.5378777550556695 0.0 22 4.544421722335833E-5 0.0 0.0 4.7113837764144515 0.0 23 4.544421722335833E-5 0.0 0.0 4.896250852079073 0.0 24 4.544421722335833E-5 0.0 0.0 5.046262213133379 0.0 25 4.544421722335833E-5 0.0 0.0 5.1750965689615995 0.0 26 4.544421722335833E-5 0.0 0.0 5.298477618723018 0.0 27 4.544421722335833E-5 0.0 0.0 5.422994773915019 0.0 28 4.544421722335833E-5 0.0 0.0 5.555419222903885 0.0 29 9.088843444671665E-5 0.0 0.0 5.695978186775733 0.0 30 9.088843444671665E-5 0.0 0.0 5.880754374005908 0.0 31 9.088843444671665E-5 0.0 0.0 6.0394910247670985 0.0 32 9.088843444671665E-5 0.0 0.0 6.205453306066803 0.0 33 9.088843444671665E-5 0.0 0.0 6.3653715064758005 0.0 34 9.088843444671665E-5 0.0 0.0 6.5336059986366735 0.0 35 9.088843444671665E-5 0.0 0.0 6.715473755964553 0.0 36 9.088843444671665E-5 0.0 0.0 6.887616450806635 0.0 37 9.088843444671665E-5 0.0 0.0 7.0647125653260625 0.0 38 9.088843444671665E-5 0.0 0.0 7.253896841626903 0.0 39 9.088843444671665E-5 0.0 0.0 7.456623494660304 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGCGTAA 25 3.891974E-5 44.999996 36 TCTAGCG 100 0.0 42.749996 1 TAATGCG 120 0.0 41.250004 1 CGTTTTT 7335 0.0 41.13497 1 ATTACGG 205 0.0 40.609756 2 ATAGCGG 510 0.0 40.14706 2 CACGACC 630 0.0 40.0 27 TATAGCG 165 0.0 39.545452 1 TTACGAG 40 3.4601544E-7 39.375 1 TACGGGA 735 0.0 39.18367 4 GCGATCG 75 0.0 39.0 9 CTATGCG 140 0.0 38.57143 1 CGAATAC 35 6.2508934E-6 38.57143 28 ACGTAGG 245 0.0 38.57143 2 CGTCAAT 35 6.2508934E-6 38.57143 22 ACTACGG 65 9.094947E-12 38.07692 2 CGACGTA 30 1.1402611E-4 37.500004 15 TACTACG 30 1.1402611E-4 37.500004 1 AACACGT 600 0.0 37.5 41 TACGCGG 115 0.0 37.173912 2 >>END_MODULE