##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545330_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3477856 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.236908313627705 31.0 31.0 33.0 30.0 34.0 2 31.533212128391746 31.0 31.0 34.0 30.0 34.0 3 31.614091555257033 31.0 31.0 34.0 30.0 34.0 4 30.235119280384236 35.0 33.0 37.0 0.0 37.0 5 32.77737491143969 35.0 33.0 37.0 19.0 37.0 6 34.383201029599846 35.0 33.0 37.0 30.0 37.0 7 35.47341264273162 36.0 35.0 37.0 33.0 37.0 8 35.670911619112466 37.0 35.0 37.0 35.0 37.0 9 37.716760843462176 39.0 37.0 39.0 35.0 39.0 10 37.15216529954087 39.0 37.0 39.0 33.0 39.0 11 36.60382546028357 39.0 35.0 39.0 32.0 39.0 12 35.03239064527111 35.0 35.0 39.0 30.0 39.0 13 34.40053210943754 35.0 33.0 39.0 27.0 39.0 14 35.06347646366037 35.0 33.0 40.0 27.0 41.0 15 35.5657428024622 35.0 33.0 40.0 30.0 41.0 16 35.85593998141383 35.0 34.0 40.0 31.0 41.0 17 35.81092690439167 35.0 34.0 40.0 31.0 41.0 18 35.82773064784741 36.0 35.0 40.0 31.0 41.0 19 35.781767272710546 36.0 34.0 40.0 31.0 41.0 20 35.61780821287598 35.0 34.0 40.0 31.0 41.0 21 35.412453822124895 35.0 34.0 40.0 30.0 41.0 22 35.25917921846103 35.0 34.0 40.0 30.0 41.0 23 35.29161558155369 35.0 34.0 40.0 30.0 41.0 24 35.22200142846627 35.0 34.0 40.0 30.0 41.0 25 35.106429650911366 35.0 34.0 39.0 30.0 41.0 26 34.9477462551641 35.0 34.0 39.0 29.0 41.0 27 34.8769477517183 35.0 34.0 39.0 29.0 41.0 28 34.96256170468242 35.0 34.0 39.0 29.0 41.0 29 35.08855254501624 35.0 34.0 39.0 29.0 41.0 30 35.058259743934194 36.0 34.0 39.0 29.0 41.0 31 34.8705156280191 35.0 34.0 39.0 29.0 41.0 32 34.708833258191255 35.0 34.0 39.0 29.0 41.0 33 34.55642700560345 35.0 33.0 39.0 28.0 41.0 34 34.517596185696014 35.0 34.0 39.0 28.0 41.0 35 34.39383718014777 35.0 33.0 39.0 27.0 41.0 36 34.1399505902487 35.0 33.0 39.0 25.0 41.0 37 34.03921065161985 35.0 33.0 39.0 25.0 41.0 38 34.062482747991865 35.0 33.0 39.0 27.0 41.0 39 34.03710446896019 35.0 33.0 39.0 26.0 41.0 40 33.92647395406826 35.0 33.0 39.0 25.0 41.0 41 33.96636117194041 35.0 33.0 39.0 25.0 41.0 42 33.894451639170796 35.0 33.0 38.0 25.0 41.0 43 33.75519572978295 35.0 33.0 38.0 25.0 41.0 44 33.69488846001675 35.0 33.0 38.0 25.0 41.0 45 33.62964740345776 35.0 33.0 38.0 24.0 40.0 46 33.61930539964852 35.0 33.0 38.0 25.0 40.0 47 33.547846719358134 35.0 33.0 38.0 24.0 40.0 48 33.493608993586854 35.0 33.0 38.0 24.0 40.0 49 33.495860955715244 35.0 33.0 38.0 24.0 40.0 50 33.264734365080095 35.0 32.0 38.0 24.0 40.0 51 33.167113014454884 35.0 32.0 37.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 3.0 13 9.0 14 14.0 15 96.0 16 306.0 17 892.0 18 1972.0 19 3886.0 20 6832.0 21 10693.0 22 16488.0 23 23610.0 24 33246.0 25 44076.0 26 56579.0 27 68477.0 28 81900.0 29 98819.0 30 120431.0 31 151818.0 32 194831.0 33 294478.0 34 457709.0 35 648186.0 36 212632.0 37 247588.0 38 317017.0 39 385005.0 40 262.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.478531601078362 25.41335811488457 30.9536967603029 12.154413523734164 2 26.49618040539919 27.195490555100616 32.31306874120148 13.995260298298723 3 28.31388073571764 25.95446734999954 31.734120101579823 13.997531812702999 4 21.25924707635969 39.196188686363094 26.6139541142589 12.930610123018319 5 23.033357332793535 32.06843526586495 30.365892089839257 14.53231531150226 6 21.341251621688766 40.82745231544952 26.35022841658769 11.481067646274026 7 88.9274599063331 4.413609994203325 4.723111020122742 1.9358190793408354 8 91.15210635517974 2.7251847115004186 3.614554484141954 2.5081544491778844 9 88.84378766688442 3.4985922361362864 5.272759999263914 2.384860097715374 10 66.63496130949642 16.758773221202947 8.094987256516658 8.511278212783967 11 59.769438412631224 15.993157853574155 14.186815095277092 10.050588638517523 12 52.03611075329169 20.928439820395095 16.329083205285094 10.706366221028128 13 18.9453214854209 53.50520550592089 17.192891252541795 10.356581756116412 14 11.609393833442212 52.64979343595595 24.569504890369238 11.171307840232602 15 9.624464037613977 21.807947195053504 57.19840039380584 11.36918837352668 16 12.007483921128419 15.48465491383197 53.799639778070166 18.70822138696944 17 13.052898107339693 17.25821885667492 25.45490670114001 44.23397633484537 18 21.046328542642364 22.713993908890995 34.9069081641103 21.33276938435634 19 33.88708445663075 23.49375592318946 21.707655521102655 20.91150409907713 20 36.1586276142543 23.344411039444992 21.523174047459122 18.973787298841586 21 21.55069100043245 31.15870812362559 25.040455959073636 22.250144916868322 22 22.290830902717076 25.732606525399554 21.8587256056605 30.117836966222868 23 18.091404589494218 34.698417645813976 21.392806372661777 25.81737139203003 24 19.5280080601382 23.774331082137962 41.90716924450006 14.79049161322378 25 14.649168913261503 25.762970059714952 38.296323942106866 21.291537084916683 26 14.207661271772034 41.38112676315523 24.109997653726893 20.30121431134584 27 16.710093804918895 38.72621523145294 27.405878794291656 17.157812169336513 28 11.89986014372073 29.300580587580395 43.44164910795617 15.35791016074271 29 11.951903701590865 24.671694285214798 41.87019244040006 21.506209572794273 30 17.048606957849895 33.33640035700156 31.379102527534204 18.235890157614346 31 32.90199479219381 27.042091449444715 21.2672117534481 18.78870200491337 32 35.336540673334376 26.23622139617051 22.71968707157513 15.707550858919978 33 30.09466176862987 27.75261540443308 21.750239227846123 20.402483599090935 34 16.922926078595548 27.827949173283773 27.575236007471272 27.67388874064941 35 18.207884397743896 24.78538501881619 32.24276680805646 24.763963775383456 36 35.42826384991213 21.39556669396318 25.510745700799575 17.66542375532512 37 19.20709195550362 33.73210391689593 29.475602210097257 17.5852019175032 38 18.432936843848623 36.34483428871121 21.8308636125245 23.391365254915673 39 19.40687020969241 34.462755214706995 26.17877220908514 19.951602366515463 40 25.484263868314272 25.46672432671163 21.917497446702797 27.131514358271303 41 15.4431925876172 21.62760620336207 26.494196424463805 36.435004784556924 42 22.643778235786645 23.988773543240434 21.675854319442784 31.69159390153014 43 21.800873871718668 25.863290487012687 24.391234139653857 27.944601501614784 44 18.89431304803879 31.90071699345804 28.017951289530103 21.187018668973067 45 15.201721980438524 42.226935215259054 19.088886946440567 23.482455857861854 46 22.410761112593505 34.52333851660333 23.71173504595935 19.354165324843812 47 20.287326444798172 25.984830884314935 27.233358712954185 26.4944839579327 48 23.996048140003495 20.001058123165535 33.42746220660085 22.57543153023012 49 20.736166189744488 19.948813291867175 34.86429570401995 24.450724814368392 50 18.671934663194794 35.85775259240175 24.540291489929427 20.93002125447402 51 16.0037965919233 37.3990182457238 21.95740709218553 24.639778070167367 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1099.0 1 1311.0 2 1523.0 3 3955.0 4 6387.0 5 5117.5 6 3848.0 7 4671.5 8 5495.0 9 6482.0 10 7469.0 11 8075.0 12 8681.0 13 8639.0 14 8597.0 15 8359.5 16 8122.0 17 8119.5 18 8117.0 19 7876.5 20 7636.0 21 8256.5 22 8877.0 23 9542.0 24 10207.0 25 11660.0 26 15316.5 27 17520.0 28 20726.0 29 23932.0 30 29052.5 31 34173.0 32 40498.5 33 46824.0 34 55273.5 35 63723.0 36 76398.5 37 89074.0 38 112935.5 39 136797.0 40 224456.0 41 312115.0 42 405852.0 43 499589.0 44 476125.0 45 452661.0 46 419097.0 47 385533.0 48 346939.0 49 308345.0 50 281855.0 51 255365.0 52 222242.0 53 189119.0 54 168565.5 55 148012.0 56 124298.0 57 100584.0 58 91345.5 59 82107.0 60 79126.0 61 76145.0 62 65878.5 63 55612.0 64 44912.5 65 34213.0 66 29978.5 67 25744.0 68 21186.0 69 16628.0 70 13865.5 71 11103.0 72 8908.5 73 6714.0 74 5582.0 75 2966.5 76 1483.0 77 1021.0 78 559.0 79 433.5 80 308.0 81 264.5 82 221.0 83 117.0 84 13.0 85 11.0 86 9.0 87 6.5 88 4.0 89 5.0 90 6.0 91 3.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3477856.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 14.725232347635911 #Duplication Level Percentage of deduplicated Percentage of total 1 76.26469610553137 11.23015370075793 2 10.387931607635084 3.0592941306755526 3 4.00759489267062 1.7703829784932166 4 2.1662596154527107 1.2759470465136633 5 1.301705572337162 0.9583958500438545 6 0.8037300449526339 0.7101066994022033 7 0.5675192417898536 0.5849796887976831 8 0.4071941598447807 0.47968228914518335 9 0.29488747022081135 0.39080578638672114 >10 1.723552763402147 5.257628917426215 >50 0.4564472700120929 4.895706996094738 >100 1.4867493363410718 55.70183951537776 >500 0.1192364483164737 10.878316249570478 >1k 0.012495471493200619 2.8067601513148492 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTCTCTTATACACATCTGACGCCTTCTACGTCGTATGCCGTCTTCTGCT 4179 0.12016023665154625 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 3638 0.10460467598428456 No Hit GCTGTCTCTTATACACATCTGACGCCTTCTACGTCGTATGCCGTCTTCTGC 3597 0.10342578876181188 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.1409201531058215 0.0 2 0.0 0.0 0.0 0.45090998592236137 0.0 3 0.0 0.0 0.0 0.6307621707166714 0.0 4 0.0 0.0 0.0 1.0408999107496113 0.0 5 0.0 0.0 0.0 1.6321549828400026 0.0 6 0.0 0.0 0.0 2.245808912157375 0.0 7 0.0 0.0 0.0 2.52069090842174 0.0 8 0.0 0.0 0.0 3.1689638673941647 0.0 9 2.8753346889577946E-5 0.0 0.0 3.3476946716597813 0.0 10 2.8753346889577946E-5 0.0 0.0 3.653342749095995 0.0 11 2.8753346889577946E-5 0.0 0.0 4.120613389398526 0.0 12 2.8753346889577946E-5 0.0 0.0 4.50320542311125 0.0 13 2.8753346889577946E-5 0.0 0.0 4.650566325920337 0.0 14 2.8753346889577946E-5 0.0 0.0 4.71031578075688 0.0 15 2.8753346889577946E-5 0.0 0.0 4.810693714748397 0.0 16 2.8753346889577946E-5 0.0 0.0 5.024704875647525 0.0 17 2.8753346889577946E-5 0.0 0.0 5.287740492993384 0.0 18 2.8753346889577946E-5 0.0 0.0 5.574325101441808 0.0 19 2.8753346889577946E-5 0.0 0.0 5.755011133295915 0.0 20 2.8753346889577946E-5 0.0 0.0 5.9466521903149525 0.0 21 5.750669377915589E-5 0.0 0.0 6.167794181242697 0.0 22 5.750669377915589E-5 0.0 0.0 6.383214256139414 0.0 23 5.750669377915589E-5 0.0 0.0 6.623132182586053 0.0 24 5.750669377915589E-5 0.0 0.0 6.798010038368466 0.0 25 5.750669377915589E-5 0.0 0.0 6.932518195117912 0.0 26 5.750669377915589E-5 0.0 2.8753346889577946E-5 7.070591766881665 0.0 27 5.750669377915589E-5 0.0 2.8753346889577946E-5 7.207428944729166 0.0 28 8.626004066873385E-5 0.0 2.8753346889577946E-5 7.368332673923245 0.0 29 8.626004066873385E-5 0.0 2.8753346889577946E-5 7.5200640854595475 0.0 30 8.626004066873385E-5 0.0 2.8753346889577946E-5 7.72291894776552 0.0 31 8.626004066873385E-5 0.0 2.8753346889577946E-5 7.917205312698398 0.0 32 8.626004066873385E-5 0.0 2.8753346889577946E-5 8.076153814303986 0.0 33 8.626004066873385E-5 0.0 2.8753346889577946E-5 8.237776377170302 0.0 34 1.1501338755831178E-4 0.0 2.8753346889577946E-5 8.418289888943074 0.0 35 1.4376673444788975E-4 0.0 2.8753346889577946E-5 8.660393069753319 0.0 36 1.4376673444788975E-4 0.0 2.8753346889577946E-5 8.862874138549728 0.0 37 1.725200813374677E-4 0.0 2.8753346889577946E-5 9.052444954592715 0.0 38 2.0127342822704562E-4 0.0 2.8753346889577946E-5 9.228185410781816 0.0 39 2.5878012200620154E-4 0.0 2.8753346889577946E-5 9.401309312403964 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGATAG 165 0.0 45.000004 1 TGTAACG 125 0.0 45.000004 1 TACCCGT 45 3.8562575E-10 45.0 12 CTCCGCG 35 1.212884E-7 45.0 38 CTATCGT 40 6.8212103E-9 45.0 10 GCGCGTT 50 2.1827873E-11 45.0 23 ACGTTAG 265 0.0 45.0 1 ATAGCGC 20 7.03526E-4 45.0 32 CCGTGCA 25 3.892442E-5 45.0 12 TGTATCG 85 0.0 45.0 1 TCGATTG 110 0.0 45.0 1 CTGCGAA 45 3.8562575E-10 45.0 32 CGTAGAT 40 6.8212103E-9 45.0 36 GTACTCG 20 7.03526E-4 45.0 1 TGTTACG 195 0.0 45.0 1 AACGACA 40 6.8212103E-9 45.0 22 CCGACAA 20 7.03526E-4 45.0 12 CTATTCG 55 1.8189894E-12 45.0 25 CGTGTAT 35 1.212884E-7 45.0 18 ACCGTTG 35 1.212884E-7 45.0 10 >>END_MODULE