SRR1545325_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545325_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	2302145
Sequences flagged as poor quality	0
Sequence length	51
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2558	0.11111376564030503	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TTATCCG	30	2.1664546E-6	45.000004	1
ATGCGAT	30	2.1664546E-6	45.000004	12
TTACGCG	30	2.1664546E-6	45.000004	1
ACACCGT	20	7.0347625E-4	45.0	18
CGCATCG	35	1.2126475E-7	45.0	21
TCTAGTC	45	3.8562575E-10	45.0	13
TCGATAG	140	0.0	45.0	1
TATTGCG	140	0.0	45.0	1
TCTACCG	25	3.8920294E-5	45.0	1
GTCCGTT	20	7.0347625E-4	45.0	10
TATTACG	55	1.8189894E-12	45.0	1
TATAGCG	75	0.0	45.0	1
ACGTATG	20	7.0347625E-4	45.0	1
ACGTAAG	90	0.0	45.0	1
TCGACGA	20	7.0347625E-4	45.0	29
TATCGGA	20	7.0347625E-4	45.0	43
TAGTCGA	25	3.8920294E-5	45.0	13
TACCGAA	40	6.8193913E-9	45.0	13
TAATCGC	20	7.0347625E-4	45.0	14
TTAACGA	65	0.0	44.999996	39