##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545324_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3121631 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.320289297485832 31.0 31.0 33.0 30.0 34.0 2 31.640724031764165 31.0 31.0 34.0 30.0 34.0 3 31.732461652258067 31.0 31.0 34.0 30.0 34.0 4 30.306114656088436 35.0 33.0 37.0 0.0 37.0 5 32.886504843141296 35.0 33.0 37.0 19.0 37.0 6 34.528680680067566 35.0 33.0 37.0 30.0 37.0 7 35.52012585728422 36.0 35.0 37.0 33.0 37.0 8 35.70005871930411 37.0 35.0 37.0 35.0 37.0 9 37.733576133758284 39.0 37.0 39.0 35.0 39.0 10 37.20646450525383 39.0 37.0 39.0 34.0 39.0 11 36.76043516994802 39.0 35.0 39.0 32.0 39.0 12 35.55490671383004 37.0 35.0 39.0 31.0 39.0 13 35.07132777704988 37.0 35.0 39.0 30.0 39.0 14 35.88869055951841 37.0 35.0 40.0 30.0 41.0 15 36.22218032816819 37.0 35.0 40.0 31.0 41.0 16 36.40453339936719 37.0 35.0 40.0 32.0 41.0 17 36.348158382589105 37.0 35.0 40.0 31.0 41.0 18 36.324066809946466 37.0 35.0 40.0 31.0 41.0 19 36.31436867458069 37.0 35.0 40.0 31.0 41.0 20 36.19834054697689 37.0 35.0 40.0 31.0 41.0 21 36.02938047450195 36.0 34.0 40.0 31.0 41.0 22 35.8980398387894 36.0 34.0 40.0 30.0 41.0 23 35.883671708795816 36.0 34.0 40.0 30.0 41.0 24 35.7885576482294 36.0 34.0 40.0 30.0 41.0 25 35.65894623675892 36.0 34.0 40.0 30.0 41.0 26 35.52919099022274 35.0 34.0 40.0 30.0 41.0 27 35.52857016091908 36.0 34.0 40.0 30.0 41.0 28 35.549881135854946 36.0 34.0 40.0 30.0 41.0 29 35.60440679888174 36.0 34.0 40.0 30.0 41.0 30 35.576249402956336 36.0 34.0 40.0 30.0 41.0 31 35.425673309881915 36.0 34.0 40.0 30.0 41.0 32 35.31421234604603 35.0 34.0 40.0 29.0 41.0 33 35.18525572048714 35.0 34.0 40.0 29.0 41.0 34 35.09665299966588 35.0 34.0 40.0 29.0 41.0 35 34.978204022192244 35.0 34.0 40.0 28.0 41.0 36 34.810504829046096 35.0 33.0 40.0 27.0 41.0 37 34.77485807899781 35.0 33.0 40.0 27.0 41.0 38 34.7586697466805 35.0 33.0 40.0 27.0 41.0 39 34.70688976371647 35.0 33.0 40.0 27.0 41.0 40 34.60063056780254 35.0 33.0 40.0 27.0 41.0 41 34.57748625638328 35.0 34.0 40.0 27.0 41.0 42 34.50565842022968 35.0 33.0 39.0 27.0 41.0 43 34.42210754570287 35.0 33.0 39.0 27.0 41.0 44 34.349942385887374 35.0 33.0 39.0 27.0 41.0 45 34.25998972972783 35.0 33.0 39.0 27.0 41.0 46 34.200087710558996 35.0 33.0 39.0 26.0 41.0 47 34.12251896524605 35.0 33.0 39.0 26.0 41.0 48 34.056824140969894 35.0 33.0 39.0 26.0 41.0 49 34.02709288830102 35.0 33.0 39.0 26.0 41.0 50 33.883151147589196 35.0 33.0 38.0 26.0 40.0 51 33.7842333062428 35.0 33.0 38.0 26.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 1.0 12 1.0 13 4.0 14 17.0 15 68.0 16 217.0 17 627.0 18 1365.0 19 2661.0 20 4494.0 21 7469.0 22 11563.0 23 16949.0 24 24169.0 25 33116.0 26 43591.0 27 54332.0 28 64927.0 29 79089.0 30 97903.0 31 123648.0 32 160732.0 33 236750.0 34 362827.0 35 493862.0 36 226012.0 37 280866.0 38 356730.0 39 437255.0 40 384.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.797416158412062 25.62964680963253 30.5632536324761 12.00968339947931 2 28.179147375202255 27.038045175743065 30.948052476413775 13.834754972640905 3 29.385407820463083 25.745707932808205 30.733997708249312 14.134886538479405 4 23.104524525800777 38.49266617354838 25.607991463436903 12.794817837213943 5 24.964898157405536 32.107190119524056 28.705378694663143 14.222533028407266 6 21.868311789574104 42.23032767165626 24.89192348487057 11.009437053899067 7 89.8224037370208 4.306210439350455 4.049966187547471 1.8214196360812667 8 91.94526835490807 2.7262991686076923 3.4585766222849528 1.8698558541992951 9 88.44575159588048 4.624761863269554 4.462346766802354 2.467139774047605 10 61.381374031716106 20.619861860674757 8.588875494893534 9.409888612715596 11 54.01708273655663 19.242569028818586 13.854264004938443 12.88608422968634 12 48.61282451385189 20.764433720705618 17.41634421236847 13.206397553074018 13 22.514896860006836 42.62845288248355 18.924177777578453 15.932472479931164 14 15.1035147972326 43.767729113402574 24.134979438633202 16.993776650731622 15 15.654060329359876 22.530145299043994 46.69168136784905 15.12411300374708 16 17.8662051985004 17.82744341019166 45.03210020659072 19.27425118471722 17 18.24568630949654 20.45446755237887 24.295440428417066 37.00440570970752 18 23.773309529537602 24.141578553006426 30.753186395188926 21.331925522267046 19 34.50907554416265 25.21364632783311 19.324513371375414 20.952764756628827 20 36.58846929697969 24.31824901790122 20.562776317892794 18.5305053672263 21 25.995545277452713 29.78359710036196 23.12778159878602 21.093076023399306 22 25.423472537272986 25.549464366544285 21.901211257832845 27.12585183834989 23 23.993450859502612 30.71221422391051 21.89240176048995 23.401933156096923 24 23.74499099989717 22.875221318599156 35.47437221119345 17.90541547031023 25 19.199354440034714 25.50612163961724 33.1334164736319 22.161107446716155 26 18.8636965740025 37.638881725610744 22.530273437187162 20.96714826319959 27 20.99130230318702 33.849932935699314 26.843563508947728 18.315201252165934 28 16.843566712401305 28.617475928448943 37.018949388957246 17.520007970192506 29 17.293203456782688 26.04641612029096 35.02025063180113 21.640129791125215 30 21.15346112336788 31.383497921439147 27.739825751346007 19.723215203846962 31 33.96115684397035 25.331629523156323 20.198063127896923 20.509150504976407 32 34.88749951547764 26.455465107823446 21.163423863999302 17.493611512699612 33 30.856882187548752 26.929095719513292 21.588554188499536 20.625467904438416 34 19.82418806066444 27.44292967362254 26.252334116364167 26.48054814934885 35 22.63995968774016 24.028048158158345 29.21882823434288 24.113163919758613 36 31.95329620957762 25.91517062714972 23.224878276772625 18.90665488650004 37 22.44442088126367 33.4950543481917 25.52047311165221 18.540051658892416 38 22.735294466258182 33.78333313578703 20.325944994779974 23.155427403174812 39 22.957902455479203 31.56362811619951 24.519201660926612 20.959267767394675 40 27.120726312623113 24.997733556592692 22.432536068484712 25.449004062299487 41 17.884849298331545 23.161738206725907 25.846616720554096 33.10679577438845 42 22.222069168328993 25.321570678917528 22.19778699019839 30.258573162555084 43 23.370507276484634 25.13378423010279 23.921501292113 27.57420720129958 44 20.47410472281958 29.759122715016606 26.602952110611405 23.16382045155241 45 19.02790560447407 36.534523138705374 20.093021885033817 24.344549371786737 46 22.50579905184181 33.03574317400103 22.477352384058204 21.981105390098957 47 22.395568214180344 25.44298156957052 26.995887726640337 25.165562489608796 48 24.382189951342745 21.38116260377988 30.534070170369272 23.7025772745081 49 21.740013473725757 23.580173313245545 30.847784379383725 23.832028833644976 50 19.941338358057052 33.29519087938325 24.018630004635398 22.744840757924305 51 18.332531936029596 34.438054978311015 22.44615074619646 24.783262339462926 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 503.0 1 1193.0 2 1883.0 3 5091.5 4 8300.0 5 6140.0 6 3980.0 7 4225.5 8 4471.0 9 4785.0 10 5099.0 11 5188.5 12 5278.0 13 5267.5 14 5257.0 15 4943.0 16 4629.0 17 4423.5 18 4218.0 19 4573.0 20 4928.0 21 4937.5 22 4947.0 23 5472.5 24 5998.0 25 8139.5 26 13134.0 27 15987.0 28 26309.0 29 36631.0 30 41201.0 31 45771.0 32 47743.0 33 49715.0 34 54460.0 35 59205.0 36 63500.0 37 67795.0 38 87897.5 39 108000.0 40 165622.0 41 223244.0 42 269909.0 43 316574.0 44 320719.0 45 324864.0 46 292209.5 47 259555.0 48 241974.5 49 224394.0 50 215162.5 51 205931.0 52 193625.0 53 181319.0 54 169338.0 55 157357.0 56 154853.5 57 152350.0 58 149790.0 59 147230.0 60 143514.5 61 139799.0 62 125603.0 63 111407.0 64 92926.5 65 74446.0 66 62275.0 67 50104.0 68 42388.5 69 34673.0 70 30034.0 71 25395.0 72 21971.0 73 18547.0 74 14773.5 75 8670.5 76 6341.0 77 4257.0 78 2173.0 79 1652.0 80 1131.0 81 902.5 82 674.0 83 382.0 84 90.0 85 76.0 86 62.0 87 55.0 88 48.0 89 37.0 90 26.0 91 19.0 92 12.0 93 10.0 94 8.0 95 4.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3121631.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 14.501649210932577 #Duplication Level Percentage of deduplicated Percentage of total 1 78.11105746746898 11.327391548882309 2 9.602542772417442 2.7850541363714743 3 3.3731088398306275 1.467469234365586 4 1.6273088283359347 0.943946471455257 5 0.9026822262924573 0.6545190497318438 6 0.5711783712354446 0.4969817025916944 7 0.3850279538431211 0.3908478226125257 8 0.27506741013008723 0.3191144872852998 9 0.20147823695647774 0.26295900443819925 >10 1.9297621653241313 6.548844973705467 >50 0.9285929687162298 9.934411918601386 >100 2.0547890826944872 60.336634820961834 >500 0.03161213970869987 2.915603103085868 >1k 0.005550223002290816 1.3954763183752839 >5k 2.413140435778616E-4 0.22074540753595534 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 6308 0.20207385177812495 No Hit AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 4138 0.13255890910873194 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3924 0.1257035184491697 No Hit AAGGAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 3755 0.12028968190026304 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.06983528802731649 0.0 2 0.0 0.0 0.0 0.20726344657648518 0.0 3 0.0 0.0 0.0 0.2954545236128165 0.0 4 0.0 0.0 0.0 0.4892954996923083 0.0 5 0.0 0.0 0.0 0.8013759473813529 0.0 6 0.0 0.0 0.0 1.1130719806408893 0.0 7 0.0 0.0 0.0 1.2748143518564494 0.0 8 0.0 0.0 0.0 1.6546798772821003 0.0 9 0.0 0.0 0.0 1.75731852996078 0.0 10 0.0 0.0 0.0 1.9335725458902733 0.0 11 0.0 0.0 0.0 2.2527966950610114 0.0 12 0.0 0.0 0.0 2.4940167495773844 0.0 13 0.0 0.0 0.0 2.5979047491519656 0.0 14 0.0 0.0 0.0 2.63781978074923 0.0 15 0.0 0.0 0.0 2.7060853765227217 0.0 16 0.0 0.0 0.0 2.8546935880634194 0.0 17 0.0 0.0 0.0 3.0157632340273404 0.0 18 3.203453579234701E-5 0.0 0.0 3.20370985552104 0.0 19 3.203453579234701E-5 0.0 0.0 3.3164393869743094 0.0 20 6.406907158469402E-5 0.0 0.0 3.4335576498311298 0.0 21 6.406907158469402E-5 0.0 0.0 3.602764067886307 0.0 22 6.406907158469402E-5 0.0 0.0 3.767261409180009 0.0 23 6.406907158469402E-5 0.0 0.0 3.9431950797515785 0.0 24 6.406907158469402E-5 0.0 0.0 4.082385137769326 0.0 25 6.406907158469402E-5 0.0 0.0 4.202770923276966 0.0 26 6.406907158469402E-5 0.0 0.0 4.315756731016575 0.0 27 6.406907158469402E-5 0.0 0.0 4.411283716749353 0.0 28 6.406907158469402E-5 0.0 0.0 4.523340522950983 0.0 29 6.406907158469402E-5 0.0 0.0 4.646801623894689 0.0 30 6.406907158469402E-5 0.0 0.0 4.804155263706697 0.0 31 6.406907158469402E-5 0.0 0.0 4.955966928826629 0.0 32 9.610360737704103E-5 0.0 0.0 5.094420192521153 0.0 33 9.610360737704103E-5 0.0 0.0 5.228805070170049 0.0 34 9.610360737704103E-5 0.0 0.0 5.37664445285173 0.0 35 9.610360737704103E-5 0.0 0.0 5.570101014501714 0.0 36 9.610360737704103E-5 0.0 0.0 5.72537240948722 0.0 37 1.2813814316938805E-4 0.0 0.0 5.886666297201687 0.0 38 1.2813814316938805E-4 0.0 0.0 6.040656310755499 0.0 39 1.2813814316938805E-4 0.0 0.0 6.220850574587451 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTATTA 50 2.1827873E-11 45.0 26 CTATCGT 20 7.03515E-4 45.0 13 ACGCACT 20 7.03515E-4 45.0 11 CACGCGA 50 2.1827873E-11 45.0 13 ACCGAAT 20 7.03515E-4 45.0 13 CCCCGTT 35 1.2128294E-7 45.0 42 TACGATA 90 0.0 45.0 13 TATTACG 45 3.8562575E-10 45.0 1 AACGACA 20 7.03515E-4 45.0 37 GTATCGC 50 2.1827873E-11 45.0 22 TACTCGA 35 1.2128294E-7 45.0 45 TCATACG 40 6.8212103E-9 45.0 1 ATACGAG 105 0.0 45.0 1 GCCGTAT 25 3.89235E-5 45.0 9 TCGAACA 25 3.89235E-5 45.0 1 AATCGTC 45 3.8562575E-10 45.0 42 ATCGACT 45 3.8562575E-10 45.0 28 TACGTCG 25 3.89235E-5 45.0 44 TACGTCA 40 6.8212103E-9 45.0 41 TAGTACT 25 3.89235E-5 45.0 24 >>END_MODULE