##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545323_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3193244 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.201404903602732 31.0 31.0 33.0 30.0 34.0 2 31.52626670558216 31.0 31.0 34.0 30.0 34.0 3 31.642589479538675 31.0 31.0 34.0 30.0 34.0 4 30.330108190918075 35.0 33.0 37.0 0.0 37.0 5 32.85594680519246 35.0 33.0 37.0 19.0 37.0 6 34.4650076849749 35.0 33.0 37.0 30.0 37.0 7 35.44263012785744 36.0 35.0 37.0 33.0 37.0 8 35.616936882994224 37.0 35.0 37.0 35.0 37.0 9 37.63935389841804 39.0 37.0 39.0 35.0 39.0 10 37.06277096269499 39.0 37.0 39.0 33.0 39.0 11 36.61271891530995 39.0 35.0 39.0 32.0 39.0 12 35.707173645358765 37.0 35.0 39.0 31.0 39.0 13 35.31653140192231 37.0 35.0 39.0 30.0 39.0 14 36.09736556304498 38.0 35.0 40.0 30.0 41.0 15 36.4066945714139 38.0 35.0 40.0 31.0 41.0 16 36.57117840039784 38.0 35.0 40.0 31.0 41.0 17 36.49475705583413 38.0 35.0 40.0 31.0 41.0 18 36.470955241754154 38.0 35.0 40.0 31.0 41.0 19 36.45649095402669 38.0 35.0 40.0 31.0 41.0 20 36.348078004687395 38.0 35.0 40.0 31.0 41.0 21 36.2054797566362 38.0 34.0 40.0 30.0 41.0 22 36.11278248702573 38.0 34.0 40.0 30.0 41.0 23 36.053165370388236 37.0 34.0 40.0 30.0 41.0 24 35.98576024882533 37.0 34.0 40.0 30.0 41.0 25 35.82200890379814 37.0 34.0 40.0 30.0 41.0 26 35.67687498982226 37.0 34.0 40.0 30.0 41.0 27 35.66677867397543 37.0 34.0 40.0 30.0 41.0 28 35.69093467332907 37.0 34.0 40.0 30.0 41.0 29 35.66738025656667 37.0 34.0 40.0 30.0 41.0 30 35.606497968836706 37.0 34.0 40.0 29.0 41.0 31 35.49091268941553 37.0 34.0 40.0 29.0 41.0 32 35.413968678873275 37.0 34.0 40.0 29.0 41.0 33 35.276389151596305 36.0 34.0 40.0 29.0 41.0 34 35.13751532923886 36.0 34.0 40.0 27.0 41.0 35 35.04039058712707 36.0 34.0 40.0 27.0 41.0 36 34.87445369035376 36.0 33.0 40.0 26.0 41.0 37 34.8139446907283 36.0 33.0 40.0 27.0 41.0 38 34.77001820092671 36.0 33.0 40.0 27.0 41.0 39 34.66725405261859 36.0 33.0 40.0 26.0 41.0 40 34.531266010364384 35.0 33.0 40.0 26.0 41.0 41 34.46228568815913 35.0 33.0 40.0 25.0 41.0 42 34.402095173434915 35.0 33.0 40.0 26.0 41.0 43 34.34048885709955 35.0 33.0 40.0 26.0 41.0 44 34.25239505656317 35.0 33.0 40.0 26.0 41.0 45 34.158508087700156 35.0 33.0 39.0 25.0 41.0 46 34.08978581029198 35.0 33.0 39.0 25.0 41.0 47 34.01598374568307 35.0 33.0 39.0 25.0 41.0 48 33.90129661247308 35.0 33.0 39.0 24.0 41.0 49 33.83518077541209 35.0 33.0 39.0 24.0 41.0 50 33.711152044754485 35.0 32.0 39.0 24.0 40.0 51 33.6079817264199 35.0 32.0 39.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 3.0 11 2.0 12 4.0 13 13.0 14 22.0 15 109.0 16 298.0 17 872.0 18 1820.0 19 3465.0 20 5919.0 21 9258.0 22 13841.0 23 19912.0 24 27391.0 25 36329.0 26 47492.0 27 57997.0 28 70011.0 29 84258.0 30 102971.0 31 127589.0 32 160691.0 33 227950.0 34 329808.0 35 418277.0 36 261215.0 37 326812.0 38 401471.0 39 457188.0 40 254.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.04044413768569 24.712079628114857 29.935764382552666 12.31171185164679 2 28.308704251851722 26.002835987478562 31.25708527127899 14.431374489390727 3 29.3487124692006 25.68475819574076 31.373737803938567 13.592791531120078 4 23.274826477400413 38.746647609766114 25.33317215972221 12.645353753111255 5 23.54937486768941 32.288763401731906 29.145877984895613 15.015983745683073 6 22.704340789491813 41.32775321898358 24.993924673466857 10.97398131805775 7 89.92811072376556 3.922969870138329 4.204063328702723 1.944856077393397 8 91.78750512018499 2.7107856461955304 3.616541673608406 1.8851675600110733 9 88.306969339017 4.415666325529775 4.796846091310279 2.4805182441429467 10 57.30269907341875 22.396409419386682 10.044957416345259 10.255934090849305 11 46.60110533363564 21.310397827413126 17.629658115696763 14.458838723254472 12 43.149536959906605 20.64145427032823 20.57218302140394 15.636825748361227 13 24.677913745394964 34.66575056588222 21.44067287059805 19.215662818124766 14 17.72492174102574 35.23701915669457 26.52547064990962 20.512588452370068 15 17.406186310848778 23.265462958671495 40.79193447165328 18.536416258826446 16 21.586887816903438 18.904317991359257 38.50945934604433 20.999334845692967 17 21.6946778886925 21.169381356388676 25.172269954942372 31.96367079997645 18 25.319549649196865 25.0354811595982 27.825872373047595 21.819096818157334 19 32.845062889024454 25.78346659384626 20.052210228845652 21.31926028828364 20 34.15038124239801 24.37781140432739 22.211018011777366 19.260789341497237 21 26.878090117761122 27.233026978207743 24.532606966457934 21.3562759375732 22 26.56759082613167 24.04457661237287 23.43679343012936 25.951039131366098 23 25.63296133962829 28.32849603725866 23.10932080354649 22.929221819566557 24 24.757018254790424 22.924493086027876 32.52592034933754 19.792568309844157 25 22.94998440457416 25.30746162836288 28.877029127745953 22.865524839317008 26 21.368332642291037 32.271069796107035 23.868642671840924 22.491954889761008 27 21.509161216618587 30.774409973055615 26.802712226187538 20.91371658413826 28 20.137484013122705 27.140206009938485 32.38430887210623 20.33800110483258 29 20.7004225170391 24.57861034108261 31.652012812049442 23.06895432982885 30 24.112877061696505 28.196686504382377 26.11219186507514 21.578244568845975 31 30.596816278367704 25.162749855632704 22.418581229621036 21.821852636378555 32 33.225177906855855 24.98424799357644 21.74096310836253 20.04961099120518 33 30.654719777129465 25.83739294585694 21.88338880461374 21.624498472399853 34 22.325697629119478 25.234902187242813 26.550053801087547 25.88934638255016 35 23.984136508202944 24.55737801433276 27.600020543372196 23.8584649340921 36 30.488713045417136 25.421170446104334 22.765689061030102 21.324427447448425 37 23.675422235194056 30.41418068897961 25.447632564251276 20.462764511575063 38 24.636952265470473 29.240922397411534 23.081793937450442 23.04033139966755 39 24.16980976085761 29.222665101695956 23.79661560469541 22.81090953275102 40 27.49774210802557 23.99528504555242 24.110497036869088 24.39647580955292 41 20.08737822728235 22.56416985360342 26.512317881126528 30.8361340379877 42 22.56824094870295 24.903765575070366 23.928487769804 28.599505706422683 43 23.333231034020578 25.48652718050985 25.027589498328346 26.152652287141226 44 22.952145216588523 27.41206121423856 26.056668391140796 23.579125178032122 45 21.07549564017031 30.676735006783073 21.858774337319666 26.38899501572695 46 22.41914491971174 30.013177821676013 24.401455072020802 23.166222186591444 47 22.662659038895868 24.677976377627264 27.18386067585189 25.475503907624976 48 23.993030285189608 22.159659581291 30.04123706174661 23.80607307177278 49 22.315175414093 24.145445822492736 29.34843062415525 24.19094813925901 50 20.695975628545767 29.556745428786524 26.136493171207714 23.610785771459994 51 19.96909725658296 30.499391841024366 23.960712053322577 25.570798849070098 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 487.0 1 1148.5 2 1810.0 3 5014.0 4 8218.0 5 6125.0 6 4032.0 7 4278.5 8 4525.0 9 4868.0 10 5211.0 11 5301.5 12 5392.0 13 5360.0 14 5328.0 15 5166.5 16 5005.0 17 4924.5 18 4844.0 19 4992.0 20 5140.0 21 5733.0 22 6326.0 23 6939.5 24 7553.0 25 8712.0 26 15562.5 27 21254.0 28 25219.0 29 29184.0 30 32899.0 31 36614.0 32 46486.0 33 56358.0 34 66983.0 35 77608.0 36 76886.5 37 76165.0 38 92837.5 39 109510.0 40 151594.0 41 193678.0 42 221139.5 43 248601.0 44 252573.0 45 256545.0 46 244037.5 47 231530.0 48 228387.0 49 225244.0 50 215347.0 51 205450.0 52 195545.5 53 185641.0 54 179075.0 55 172509.0 56 174032.0 57 175555.0 58 179313.5 59 183072.0 60 175831.5 61 168591.0 62 151693.0 63 134795.0 64 119779.0 65 104763.0 66 90766.0 67 76769.0 68 64453.0 69 52137.0 70 45391.0 71 38645.0 72 31628.5 73 24612.0 74 20483.5 75 12915.5 76 9476.0 77 7100.5 78 4725.0 79 3386.5 80 2048.0 81 1749.5 82 1451.0 83 949.0 84 447.0 85 276.5 86 106.0 87 75.0 88 44.0 89 30.5 90 17.0 91 10.0 92 3.0 93 1.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3193244.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.862431455525144 #Duplication Level Percentage of deduplicated Percentage of total 1 78.40927180507354 13.221709712906929 2 8.410235416921513 2.8363403648533794 3 2.9194476488287506 1.4768695759910653 4 1.5004776686194377 1.0120680735056575 5 0.9125140564061388 0.7693602864175861 6 0.6229034279678346 0.6302199814511553 7 0.45637942963151273 0.5386966794911131 8 0.3268172429028025 0.44087466855457746 9 0.26025967992744786 0.3949749912072153 >10 2.976595668270681 12.225907601933121 >50 1.435285176811056 17.769480848760402 >100 1.7615057027947993 47.361233973510544 >500 0.0066861829967907165 0.7641056636426337 >1k 0.0014182812417434854 0.37328944694654215 >5k 2.0261160596335504E-4 0.1848681308280926 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 5411 0.16945150448885207 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3760 0.1177485967248353 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.04061700264683814 0.0 2 0.0 0.0 0.0 0.12880318572586372 0.0 3 0.0 0.0 0.0 0.18908670931504137 0.0 4 0.0 0.0 0.0 0.3332974241868144 0.0 5 0.0 0.0 0.0 0.5927201303752547 0.0 6 3.1316116150222154E-5 0.0 0.0 0.8679887913357075 0.0 7 6.263223230044431E-5 0.0 0.0 1.0216569732848477 0.0 8 6.263223230044431E-5 0.0 0.0 1.4064694085387774 0.0 9 6.263223230044431E-5 0.0 0.0 1.5254393337934715 0.0 10 6.263223230044431E-5 0.0 0.0 1.7235450845597768 0.0 11 6.263223230044431E-5 0.0 0.0 2.027593256262284 0.0 12 6.263223230044431E-5 0.0 0.0 2.2595204124708292 0.0 13 9.394834845066648E-5 0.0 0.0 2.361297789959051 0.0 14 9.394834845066648E-5 0.0 0.0 2.399315554965421 0.0 15 9.394834845066648E-5 0.0 0.0 2.4606951426198562 0.0 16 9.394834845066648E-5 0.0 0.0 2.58815173535126 0.0 17 9.394834845066648E-5 0.0 0.0 2.734147468843596 0.0 18 9.394834845066648E-5 0.0 0.0 2.89824391747076 0.0 19 9.394834845066648E-5 0.0 0.0 3.0118587868637663 0.0 20 1.2526446460088862E-4 0.0 0.0 3.1329582080166753 0.0 21 1.2526446460088862E-4 0.0 0.0 3.297962824012196 0.0 22 1.2526446460088862E-4 0.0 0.0 3.475305989770904 0.0 23 1.5658058075111077E-4 0.0 0.0 3.6556868187961835 0.0 24 1.5658058075111077E-4 0.0 0.0 3.7977993538858916 0.0 25 1.5658058075111077E-4 0.0 0.0 3.921936438305372 0.0 26 1.5658058075111077E-4 0.0 0.0 4.0350502498399745 0.0 27 1.5658058075111077E-4 0.0 0.0 4.1581225863103475 0.0 28 1.5658058075111077E-4 0.0 0.0 4.281226238896871 0.0 29 1.5658058075111077E-4 0.0 0.0 4.423902464077283 0.0 30 1.8789669690133295E-4 0.0 0.0 4.598646392195523 0.0 31 1.8789669690133295E-4 0.0 0.0 4.755320921295084 0.0 32 1.8789669690133295E-4 0.0 0.0 4.899187158889204 0.0 33 1.8789669690133295E-4 0.0 0.0 5.046717382072901 0.0 34 1.8789669690133295E-4 0.0 0.0 5.209060128195653 0.0 35 1.8789669690133295E-4 0.0 0.0 5.406727453335855 0.0 36 2.192128130515551E-4 0.0 0.0 5.569038883342457 0.0 37 2.5052892920177723E-4 0.0 0.0 5.742530166814688 0.0 38 2.818450453519994E-4 0.0 0.0 5.9639664241129084 0.0 39 2.818450453519994E-4 0.0 0.0 6.373863068403166 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 2830 0.0 41.660778 1 TATAGCG 200 0.0 40.5 1 CCCGATA 45 1.9301297E-8 40.000004 9 ATAGGGC 1710 0.0 39.605263 4 GCTACGA 700 0.0 38.89286 10 CGTATTT 675 0.0 38.666668 1 TACGAAT 705 0.0 38.617023 12 ATACGCA 70 0.0 38.57143 36 ATAGGGA 4195 0.0 38.29559 4 TATGGGC 835 0.0 38.26347 4 GGCGATA 1145 0.0 37.925762 8 TTAATCG 1105 0.0 37.873302 20 CGAATAT 715 0.0 37.762238 14 CGTTGAT 1095 0.0 37.602737 25 ATAGGGT 1030 0.0 37.572815 4 TCGATAG 90 0.0 37.500004 1 TACGAAC 30 1.1403767E-4 37.499996 17 TACCTAC 30 1.1403767E-4 37.499996 28 ACCGTTA 30 1.1403767E-4 37.499996 42 GGCCTAT 1195 0.0 37.468616 8 >>END_MODULE