##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545322_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 4385622 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.242347379687534 31.0 31.0 33.0 30.0 34.0 2 31.564927392283238 31.0 31.0 34.0 30.0 34.0 3 31.658864580668375 31.0 31.0 34.0 30.0 34.0 4 30.274889399952848 35.0 33.0 37.0 0.0 37.0 5 32.83786290747356 35.0 33.0 37.0 19.0 37.0 6 34.452781612277576 35.0 33.0 37.0 30.0 37.0 7 35.47647061237836 36.0 35.0 37.0 33.0 37.0 8 35.65554600920918 37.0 35.0 37.0 35.0 37.0 9 37.66742528197825 39.0 37.0 39.0 35.0 39.0 10 37.09913257458121 39.0 37.0 39.0 33.0 39.0 11 36.636691443083784 39.0 35.0 39.0 32.0 39.0 12 35.59299228250862 37.0 35.0 39.0 31.0 39.0 13 35.16931167346388 37.0 35.0 39.0 30.0 39.0 14 36.017087883999125 38.0 35.0 40.0 30.0 41.0 15 36.320765902761345 38.0 35.0 40.0 31.0 41.0 16 36.50941827635852 38.0 35.0 40.0 32.0 41.0 17 36.453936750590906 38.0 35.0 40.0 31.0 41.0 18 36.43005233921209 37.0 35.0 40.0 31.0 41.0 19 36.42039259197441 37.0 35.0 40.0 31.0 41.0 20 36.308465253047345 37.0 35.0 40.0 31.0 41.0 21 36.15704613849529 37.0 34.0 40.0 31.0 41.0 22 36.01316141701223 37.0 34.0 40.0 30.0 41.0 23 35.95814162734499 37.0 34.0 40.0 30.0 41.0 24 35.87602055079074 37.0 34.0 40.0 30.0 41.0 25 35.7719422695344 36.0 34.0 40.0 30.0 41.0 26 35.617338658005636 36.0 34.0 40.0 30.0 41.0 27 35.61177525103623 36.0 34.0 40.0 30.0 41.0 28 35.632428877819386 36.0 34.0 40.0 30.0 41.0 29 35.6742197571975 36.0 34.0 40.0 30.0 41.0 30 35.63055730749253 36.0 34.0 40.0 30.0 41.0 31 35.534931191060245 36.0 34.0 40.0 30.0 41.0 32 35.43390675256554 36.0 34.0 40.0 29.0 41.0 33 35.30223238573684 36.0 34.0 40.0 29.0 41.0 34 35.19855997621318 36.0 34.0 40.0 29.0 41.0 35 35.08168214223661 36.0 34.0 40.0 28.0 41.0 36 34.92697911493512 36.0 33.0 40.0 27.0 41.0 37 34.87128553258808 36.0 33.0 40.0 27.0 41.0 38 34.85297205276697 35.0 33.0 40.0 27.0 41.0 39 34.797513328782095 35.0 33.0 40.0 27.0 41.0 40 34.694899149995145 35.0 33.0 40.0 27.0 41.0 41 34.652917191677716 35.0 33.0 40.0 27.0 41.0 42 34.591801573414216 35.0 33.0 40.0 27.0 41.0 43 34.51138971849375 35.0 33.0 40.0 27.0 41.0 44 34.449804611523746 35.0 33.0 40.0 27.0 41.0 45 34.33660812536967 35.0 33.0 40.0 26.0 41.0 46 34.27021435043878 35.0 33.0 39.0 26.0 41.0 47 34.20057109345037 35.0 33.0 39.0 26.0 41.0 48 34.10088261140609 35.0 33.0 39.0 26.0 41.0 49 34.051001659513744 35.0 33.0 39.0 26.0 41.0 50 33.91617038586545 35.0 33.0 39.0 25.0 41.0 51 33.81503832295624 35.0 33.0 39.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 2.0 13 3.0 14 39.0 15 86.0 16 288.0 17 806.0 18 1925.0 19 3867.0 20 6646.0 21 11124.0 22 16830.0 23 24919.0 24 34790.0 25 47526.0 26 62151.0 27 76298.0 28 92138.0 29 112942.0 30 139103.0 31 174199.0 32 222479.0 33 321132.0 34 479968.0 35 641849.0 36 328003.0 37 409204.0 38 527872.0 39 648993.0 40 438.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.940395227860495 25.823794207526323 30.20973991830577 12.026070646307412 2 28.437471355260442 27.413944931870553 30.628585865357298 13.51999784751171 3 29.31378946931587 26.059975073091113 30.98502333306427 13.641212124528746 4 22.535891146113368 38.944692451834655 25.82429584674648 12.695120555305495 5 24.467247747297876 32.41752253158161 28.54507296798493 14.570156753135588 6 21.974055219533284 41.885233155068995 25.412586857690883 10.728124767706838 7 89.84928477648097 4.0339545907057195 4.279392980060753 1.8373676527525629 8 91.60340312046958 2.908504198492255 3.538722671493348 1.9493700095448263 9 88.0551037002277 4.539173690755838 4.965658235023447 2.440064373993016 10 57.908159891572964 22.814369318650808 9.315896354040545 9.961574435735683 11 48.93492872846771 19.447458080062532 18.293186234472554 13.324426956997208 12 45.25526823789191 20.908345498084422 19.684733431198584 14.151652832825082 13 22.55716520940473 40.130430757598354 20.29538797461341 17.017016058383508 14 15.916442411133472 41.04115676180026 24.31522826180642 18.727172565259842 15 15.293338094345568 23.7229063517102 44.51452952397631 16.469226029967928 16 17.129269234785852 19.074671734134863 43.05555745570412 20.74050157537517 17 17.89718767372108 21.5821381778913 25.42008864421056 35.100585504177054 18 22.738598994623796 25.36903545266783 29.658050785042576 22.234314767665794 19 31.636880697880482 26.1035492798969 20.885862940308126 21.373707081914493 20 34.63980707867664 24.08244486186908 21.940331382868838 19.33741667658544 21 25.004275334262733 29.621043491664352 23.804491130334533 21.57019004373838 22 25.392726504929065 26.363124774547376 22.124911814105275 26.11923690641829 23 24.069675863537714 30.505889472462517 22.183489593950416 23.240945070049357 24 22.027160571522124 23.564137538529312 35.564943809566806 18.843758080381757 25 19.569721239085354 26.659069112659505 31.249387202089007 22.52182244616613 26 19.19251134730718 37.095490673842846 22.76488945011677 20.94710852873321 27 20.12031588677729 33.709745162715805 26.213453872677583 19.956485077829324 28 17.38622252442185 28.760709427305862 35.791684737079486 18.061383311192802 29 17.826068913371923 24.824870907707048 34.15624967222438 23.192810506696656 30 21.139715187492218 30.68474665623257 27.295558075912606 20.879980080362603 31 31.107833734872724 26.792049109567586 21.29645464200973 20.80366251354996 32 32.901832396864116 26.54223277792751 21.57616411081484 18.979770714393535 33 29.237357893589554 27.49974804030078 22.138068442743126 21.124825623366537 34 20.838389628654728 26.968626115064183 26.726448380640193 25.4665358756409 35 23.155461186577412 24.687832193472214 27.981982943354446 24.17472367659593 36 29.97125607268479 26.47341699763454 23.203162516058157 20.352164413622514 37 22.559262973416313 32.48369330507737 26.408044286534498 18.548999434971826 38 22.119462188031708 32.38170093090558 22.796492720986897 22.70234416007581 39 22.518402178755945 31.48296866442206 25.02176430162016 20.97686485520184 40 26.331931935766466 25.386820843200802 23.805745228384936 24.475501992647793 41 17.96443013100536 23.871117939484982 27.245667775289345 30.91878415422031 42 22.07705087214539 25.937506698023675 22.7849550189232 29.200487410907733 43 22.441833792333217 27.55344623864072 24.24579683337962 25.758923135646437 44 21.21448223307891 29.87719871890464 25.56620246797376 23.342116580042692 45 18.62413130908227 34.90125231951135 21.53471046980337 24.93990590160301 46 21.58731418257205 33.11735484727138 23.40639480557148 21.888936164585093 47 22.257367370010456 26.010107574250586 26.784592926613378 24.947932129125583 48 23.699808145800073 21.949018862090714 30.90528549884144 23.445887493267772 49 21.03535142791604 24.811281045197237 30.266835582273167 23.886531944613555 50 19.654566672640733 31.61665551659491 25.818025356494473 22.910752454269883 51 17.51553143430966 32.79254345221727 24.050613573171606 25.641311540301466 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 671.0 1 1589.5 2 2508.0 3 6974.5 4 11441.0 5 8557.5 6 5674.0 7 6108.5 8 6543.0 9 7051.0 10 7559.0 11 8026.0 12 8493.0 13 8450.5 14 8408.0 15 7780.5 16 7153.0 17 7619.5 18 8086.0 19 7718.5 20 7351.0 21 7779.5 22 8208.0 23 9664.5 24 11121.0 25 15175.5 26 27037.0 27 34844.0 28 43112.0 29 51380.0 30 56806.0 31 62232.0 32 72685.0 33 83138.0 34 92214.0 35 101290.0 36 105452.0 37 109614.0 38 139673.0 39 169732.0 40 239138.0 41 308544.0 42 365938.0 43 423332.0 44 422574.5 45 421817.0 46 400727.5 47 379638.0 48 362033.5 49 344429.0 50 315888.0 51 287347.0 52 272653.5 53 257960.0 54 240322.5 55 222685.0 56 212181.0 57 201677.0 58 201842.0 59 202007.0 60 187098.0 61 172189.0 62 157145.5 63 142102.0 64 119002.5 65 95903.0 66 81255.0 67 66607.0 68 55340.0 69 44073.0 70 39410.0 71 34747.0 72 30280.0 73 25813.0 74 19076.5 75 10345.5 76 8351.0 77 6349.0 78 4347.0 79 3719.0 80 3091.0 81 2185.5 82 1280.0 83 904.0 84 528.0 85 304.5 86 81.0 87 53.5 88 26.0 89 21.5 90 17.0 91 11.0 92 5.0 93 5.5 94 6.0 95 5.0 96 4.0 97 2.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 4385622.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 14.959423842352715 #Duplication Level Percentage of deduplicated Percentage of total 1 77.10449903007017 11.534388811430935 2 9.927880428506063 2.9703074237244094 3 3.5026470196339745 1.5719274401057446 4 1.8626391479642517 1.1145603391902388 5 1.046781688137445 0.782962547163076 6 0.7276965986388806 0.6531553108606467 7 0.4943313450358712 0.5176438476266327 8 0.3691126060221366 0.4417369535232395 9 0.26332461069168756 0.35452660135135294 >10 2.077200541325155 6.851481095000494 >50 0.7446103856828774 8.151119627469807 >100 1.8370494840243878 60.06919522767963 >500 0.03640841741939055 3.4662055901202367 >1k 0.005652448366480723 1.3898993486234854 >5k 1.6624848136708012E-4 0.13088983613014485 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5263 0.1200057825321015 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.05632040335441586 0.0 2 0.0 0.0 0.0 0.17329354878281802 0.0 3 0.0 0.0 0.0 0.25734091994248476 0.0 4 0.0 0.0 0.0 0.4606644165867464 0.0 5 0.0 0.0 0.0 0.8021895183853054 0.0 6 0.0 0.0 0.0 1.1752950892712595 0.0 7 0.0 0.0 0.0 1.3668528660244772 0.0 8 2.280178273458132E-5 0.0 0.0 1.8448922410549746 0.0 9 2.280178273458132E-5 0.0 0.0 1.9791947413616586 0.0 10 2.280178273458132E-5 0.0 0.0 2.2099487826356214 0.0 11 2.280178273458132E-5 0.0 0.0 2.582119480429458 0.0 12 2.280178273458132E-5 0.0 0.0 2.8837414624424995 0.0 13 2.280178273458132E-5 0.0 0.0 2.9990500777312774 0.0 14 2.280178273458132E-5 0.0 0.0 3.0429435094953465 0.0 15 2.280178273458132E-5 0.0 0.0 3.108703850901879 0.0 16 2.280178273458132E-5 0.0 0.0 3.2673586551690956 0.0 17 2.280178273458132E-5 0.0 0.0 3.4479259726442453 0.0 18 4.560356546916264E-5 0.0 0.0 3.6580672023261465 0.0 19 6.840534820374396E-5 0.0 0.0 3.7981157518819453 0.0 20 6.840534820374396E-5 0.0 0.0 3.938779949571577 0.0 21 6.840534820374396E-5 0.0 0.0 4.130679753065814 0.0 22 6.840534820374396E-5 0.0 0.0 4.338335588429646 0.0 23 6.840534820374396E-5 0.0 0.0 4.560014520175246 0.0 24 9.120713093832528E-5 0.0 0.0 4.73025263007163 0.0 25 9.120713093832528E-5 0.0 0.0 4.873789852385819 0.0 26 9.120713093832528E-5 0.0 0.0 5.005150922719742 0.0 27 9.120713093832528E-5 0.0 0.0 5.130537925977205 0.0 28 9.120713093832528E-5 0.0 0.0 5.269697206006354 0.0 29 1.140089136729066E-4 0.0 0.0 5.425205364256199 0.0 30 1.140089136729066E-4 0.0 0.0 5.61518981800073 0.0 31 1.3681069640748792E-4 0.0 0.0 5.80202762572789 0.0 32 1.5961247914206923E-4 0.0 0.0 5.960021178295804 0.0 33 1.5961247914206923E-4 0.0 0.0 6.121754223232189 0.0 34 1.5961247914206923E-4 0.0 0.0 6.298650453687071 0.0 35 1.5961247914206923E-4 0.0 0.0 6.51873326064125 0.0 36 1.5961247914206923E-4 0.0 0.0 6.715945879512644 0.0 37 2.0521604461123187E-4 0.0 0.0 6.912702462729346 0.0 38 2.0521604461123187E-4 0.0 0.0 7.0917648625440135 0.0 39 2.0521604461123187E-4 0.0 0.0 7.2964792679350845 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCCGCGA 65 0.0 45.000004 25 TACGAGT 35 1.2129749E-7 45.0 44 CGTAAGT 25 3.8926097E-5 45.0 22 ACGTATG 280 0.0 44.196426 1 GCGATAT 520 0.0 44.134617 9 TAGTACG 130 0.0 43.269234 1 TCGACAG 125 0.0 43.2 1 TTACGAG 85 0.0 42.35294 1 CGGTCTA 225 0.0 42.0 31 ACTTACG 60 3.6379788E-12 41.249996 1 ATCGATC 55 6.184564E-11 40.909092 11 CGCTAGC 50 1.0822987E-9 40.5 13 AACGCGC 50 1.0822987E-9 40.5 41 TCGTAAG 50 1.0822987E-9 40.5 1 CGATATA 140 0.0 40.17857 10 TTCGTTA 45 1.9304935E-8 40.000004 42 GTTAGCG 310 0.0 39.919353 1 TATAGCG 220 0.0 39.886368 1 ATAGCGG 965 0.0 39.637306 2 CGGGTAT 455 0.0 39.56044 6 >>END_MODULE