SRR1545320_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545320_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	2268920
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2803	0.12353895245314953	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTCGATA	20	7.0347404E-4	45.000004	23
ATTACGT	20	7.0347404E-4	45.000004	45
CGACATA	20	7.0347404E-4	45.000004	45
CATTACG	20	7.0347404E-4	45.000004	44
CTAACGT	20	7.0347404E-4	45.000004	27
TCTACGA	20	7.0347404E-4	45.000004	40
CACTAGC	20	7.0347404E-4	45.000004	15
TACGACG	30	2.16644E-6	45.000004	1
TACGACA	35	1.2126293E-7	45.000004	14
CGCTAAT	35	1.2126293E-7	45.000004	22
TATTCCG	30	2.16644E-6	45.000004	1
GTCGTTA	35	1.2126293E-7	45.000004	34
CGTACTA	35	1.2126293E-7	45.000004	8
TTAACGA	20	7.0347404E-4	45.000004	1
CGTCGAT	30	2.16644E-6	45.000004	34
ACCCGTC	20	7.0347404E-4	45.000004	36
CCGAACA	20	7.0347404E-4	45.000004	13
GACGATA	20	7.0347404E-4	45.000004	21
ATACGGT	30	2.16644E-6	45.000004	32
ACGAGTT	20	7.0347404E-4	45.000004	43