##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545319_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1982620 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.289701001704813 31.0 31.0 33.0 30.0 34.0 2 31.58946091535443 31.0 31.0 34.0 30.0 34.0 3 31.66700527584711 31.0 31.0 34.0 30.0 34.0 4 30.27851529793909 35.0 33.0 37.0 0.0 37.0 5 32.825982286065916 35.0 33.0 37.0 19.0 37.0 6 34.43557867871806 35.0 33.0 37.0 30.0 37.0 7 35.487120577821265 36.0 35.0 37.0 33.0 37.0 8 35.70856089417034 37.0 35.0 37.0 35.0 37.0 9 37.77820913740404 39.0 37.0 39.0 35.0 39.0 10 37.242211820722076 39.0 37.0 39.0 34.0 39.0 11 36.66342768659652 39.0 35.0 39.0 32.0 39.0 12 34.820858258264316 35.0 34.0 39.0 30.0 39.0 13 34.08447155783761 35.0 33.0 39.0 25.0 39.0 14 34.7155420605058 35.0 33.0 40.0 25.0 41.0 15 35.29233539457889 35.0 33.0 40.0 30.0 41.0 16 35.643332055562844 35.0 34.0 40.0 31.0 41.0 17 35.6078123896662 35.0 34.0 40.0 31.0 41.0 18 35.5950373747869 36.0 34.0 39.0 31.0 41.0 19 35.557668136102734 36.0 34.0 39.0 31.0 41.0 20 35.387017683671104 35.0 34.0 39.0 30.0 41.0 21 35.144862353855 35.0 34.0 39.0 30.0 41.0 22 34.991245422723466 35.0 34.0 39.0 30.0 41.0 23 35.06425840554418 35.0 34.0 39.0 30.0 41.0 24 34.952317640294154 35.0 34.0 39.0 29.0 41.0 25 34.83793213021154 35.0 34.0 39.0 29.0 41.0 26 34.66217227708789 35.0 34.0 39.0 29.0 41.0 27 34.60641474412646 35.0 34.0 39.0 29.0 41.0 28 34.7599439126005 35.0 34.0 39.0 29.0 41.0 29 34.911400066578565 35.0 34.0 39.0 29.0 41.0 30 34.9065186470428 35.0 34.0 38.0 29.0 41.0 31 34.64633616124119 35.0 34.0 38.0 29.0 41.0 32 34.483757351383524 35.0 34.0 38.0 29.0 41.0 33 34.3298408166971 35.0 33.0 38.0 28.0 41.0 34 34.33516104952033 35.0 34.0 38.0 28.0 41.0 35 34.179258254229254 35.0 33.0 38.0 27.0 41.0 36 33.928456789500764 35.0 33.0 38.0 25.0 41.0 37 33.8292466534182 35.0 33.0 38.0 25.0 41.0 38 33.87416196749756 35.0 33.0 38.0 27.0 41.0 39 33.88458756594809 35.0 33.0 38.0 26.0 41.0 40 33.75507056319416 35.0 33.0 38.0 24.0 41.0 41 33.83269612936417 35.0 33.0 38.0 25.0 41.0 42 33.7890664877788 35.0 33.0 38.0 26.0 40.0 43 33.650051447075086 35.0 33.0 38.0 26.0 40.0 44 33.585954444119395 35.0 33.0 38.0 26.0 40.0 45 33.49754970695343 35.0 33.0 38.0 26.0 40.0 46 33.49477055613279 35.0 33.0 37.0 26.0 40.0 47 33.446238815305 35.0 33.0 37.0 26.0 40.0 48 33.42605945667854 35.0 33.0 37.0 26.0 40.0 49 33.46739163329332 35.0 33.0 37.0 25.0 40.0 50 33.202643976152764 35.0 32.0 36.0 24.0 40.0 51 33.10651965580898 35.0 32.0 36.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 2.0 14 6.0 15 49.0 16 134.0 17 508.0 18 1024.0 19 2064.0 20 3824.0 21 6174.0 22 9379.0 23 13603.0 24 18984.0 25 25494.0 26 33002.0 27 39911.0 28 47773.0 29 57130.0 30 69363.0 31 88204.0 32 114318.0 33 175825.0 34 279127.0 35 401832.0 36 109762.0 37 125816.0 38 162245.0 39 196916.0 40 151.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.198615972803662 25.098304264054633 31.164973620764442 12.53810614237726 2 26.888258970453236 26.456305292996134 32.48670950560369 14.168726230946929 3 27.978129949259063 26.279266828741765 31.624214423338813 14.118388798660359 4 21.273163793364336 39.9838597411506 25.550483703382394 13.192492762102672 5 23.393035478306484 32.92617849108755 30.033692790348127 13.64709324025784 6 21.419888833967175 41.05602687353098 26.118368623336796 11.405715669165044 7 90.17143981196598 4.258708174032341 4.016806044526939 1.5530459694747356 8 92.99406845487285 1.9092413069574603 3.242124058064581 1.8545661801051132 9 90.69317367927287 2.8113304617122794 4.485125742704098 2.0103701163107406 10 72.24879200250174 13.300985564555992 6.958872602919369 7.491349830022899 11 67.15568288426425 13.181497210761517 11.10676781228879 8.556052092685436 12 56.58033309459201 20.73705500801969 13.312636813912903 9.369975083475401 13 17.941763928539004 57.13258213878605 14.656817746214603 10.26883618646034 14 10.263237534171953 55.770092100352066 23.551008261794998 10.415662103680988 15 9.2490240187227 19.913952245009128 61.058145282504974 9.778878453763202 16 11.497160323208684 12.66677426839233 57.51445057550111 18.321614832897883 17 12.062069382937729 14.68476056934763 25.20195498885313 48.05121505886151 18 22.865097699004348 21.134710635421815 36.15690349133974 19.843288174234093 19 37.09490472203448 23.07451755757533 19.909967618605684 19.920610101784508 20 39.887825200996666 22.417558584095794 19.272276079127618 18.422340135779926 21 21.29994653539256 31.92502849764453 24.380970634816556 22.39405433214635 22 22.300339954202013 25.375563648102005 20.917271085735038 31.40682531196094 23 18.69087369238684 35.18884102853799 19.82250759096549 26.297777688109676 24 20.318870988893483 21.39300521532114 44.239440740030865 14.048683055754507 25 13.730568641494589 24.08984071582048 40.9467774964441 21.232813146240833 26 13.633827965015987 43.95158931111357 23.223764513623387 19.190818210247045 27 15.677184735350194 40.117016876658155 28.135850541203055 16.069947846788594 28 11.37444391764433 29.091000796925282 46.378327667429964 13.156227618000424 29 11.317045122111145 23.850359625142488 44.10915858813086 20.72343666461551 30 18.14387023231885 33.54112235324974 30.954141489544142 17.36086592488727 31 38.512725585336575 25.0587606298736 19.21296062785607 17.215553156933755 32 39.4621258738437 25.724294115866886 20.95620946020922 13.857370550080198 33 32.688412302912305 27.50310195599762 20.65484056450555 19.15364517658452 34 18.289384753507985 27.025804238835484 26.20633303406603 28.4784779735905 35 18.70227275019923 25.75178299421977 33.18422087944236 22.361723376138645 36 38.14583732636612 21.340498935751683 24.457334234497786 16.05632950338441 37 19.32917049157176 36.64050599711493 27.591167243344668 16.439156267968645 38 18.872451604442606 38.96233267091021 19.872794584943158 22.29242113970403 39 20.239834158840324 36.34453400046404 25.04826946162149 18.367362379074155 40 27.905902290907992 25.040602838668025 20.337280971643583 26.7162138987804 41 15.155400429734392 21.16457011429321 25.300057499672153 38.37997195630025 42 23.039916877666926 23.83008342496293 19.955664726473053 33.17433497089709 43 23.07925875861234 24.993695211386953 22.97565847212275 28.95138755787796 44 18.50899315047765 32.990134266778306 28.226639497230938 20.274233085513107 45 14.84540658320808 45.781844226326776 17.214594829064573 22.15815436140057 46 22.619362258022214 36.46008816616397 22.36111811643179 18.55943145938203 47 21.2624204335677 25.739677800082717 25.901383018430156 27.09651874791942 48 24.734946686707488 18.155975426455903 34.86568278338763 22.24339510344897 49 20.647627886332227 19.732979592660218 35.38630700789864 24.233085513108914 50 17.437633031039734 38.4669780391603 23.8044103257306 20.290978604069362 51 15.572979189153745 41.242446863241575 20.137696583308955 23.046877364295728 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 502.0 1 706.5 2 911.0 3 2164.0 4 3417.0 5 2666.5 6 1916.0 7 2354.5 8 2793.0 9 3350.5 10 3908.0 11 4186.5 12 4465.0 13 4412.0 14 4359.0 15 4385.0 16 4411.0 17 4093.5 18 3776.0 19 3740.0 20 3704.0 21 3678.5 22 3653.0 23 3858.0 24 4063.0 25 4941.0 26 7332.0 27 8845.0 28 10078.5 29 11312.0 30 12787.0 31 14262.0 32 18128.0 33 21994.0 34 24800.5 35 27607.0 36 29400.0 37 31193.0 38 54871.0 39 78549.0 40 135808.5 41 193068.0 42 240268.0 43 287468.0 44 283577.0 45 279686.0 46 244962.5 47 210239.0 48 190803.5 49 171368.0 50 157559.0 51 143750.0 52 127341.0 53 110932.0 54 95753.5 55 80575.0 56 73124.0 57 65673.0 58 63361.0 59 61049.0 60 54180.0 61 47311.0 62 41693.0 63 36075.0 64 28150.5 65 20226.0 66 16609.0 67 12992.0 68 10250.0 69 7508.0 70 7160.5 71 6813.0 72 4797.0 73 2781.0 74 2487.5 75 1633.0 76 1072.0 77 663.0 78 254.0 79 161.5 80 69.0 81 50.0 82 31.0 83 25.5 84 20.0 85 12.0 86 4.0 87 2.0 88 0.0 89 0.5 90 1.0 91 1.5 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1982620.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 15.121994591978199 #Duplication Level Percentage of deduplicated Percentage of total 1 78.16030760609927 11.819397489267857 2 10.268421605665068 3.1055803197803855 3 3.634930424944792 1.649021946846965 4 1.668568666004253 1.0092834537464237 5 0.843840613405627 0.6380276596205728 6 0.4725199879127429 0.42872668210908615 7 0.3328620505107121 0.3523476689388434 8 0.23465087209860366 0.2838711375102442 9 0.16139782169402828 0.21965912881327415 >10 1.4976385001914017 5.2501267104984155 >50 0.7290311185919163 8.087250491681887 >100 1.9500861916298375 62.146267947854106 >500 0.0399814494405083 3.9133912786157925 >1k 0.005763091811244439 1.0970480847161421 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.08559381021073126 0.0 2 0.0 0.0 0.0 0.2947110389282868 0.0 3 0.0 0.0 0.0 0.4216642624406089 0.0 4 0.0 0.0 0.0 0.6931232409639769 0.0 5 0.0 0.0 0.0 1.0815990961455044 0.0 6 0.0 0.0 0.0 1.518647042801949 0.0 7 0.0 0.0 0.0 1.7187358142256206 0.0 8 0.0 0.0 0.0 2.2070290827289143 0.0 9 0.0 0.0 0.0 2.3351928256549415 0.0 10 0.0 0.0 0.0 2.5264044547114426 0.0 11 0.0 0.0 0.0 2.846385086400823 0.0 12 0.0 0.0 0.0 3.0726513401458675 0.0 13 5.043830890437905E-5 0.0 0.0 3.1796309933320557 0.0 14 5.043830890437905E-5 0.0 0.0 3.221595666340499 0.0 15 5.043830890437905E-5 0.0 0.0 3.2951347207230834 0.0 16 5.043830890437905E-5 0.0 0.0 3.4508377803109016 0.0 17 1.008766178087581E-4 0.0 0.0 3.6320121858954315 0.0 18 1.008766178087581E-4 0.0 0.0 3.8465767519746596 0.0 19 1.008766178087581E-4 0.0 0.0 3.9616769728944528 0.0 20 1.008766178087581E-4 0.0 0.0 4.08580565110813 0.0 21 1.5131492671313716E-4 0.0 0.0 4.255328807335748 0.0 22 1.5131492671313716E-4 0.0 0.0 4.397514400137192 0.0 23 2.017532356175162E-4 0.0 0.0 4.578133984323774 0.0 24 2.5219154452189526E-4 0.0 0.0 4.697874529662769 0.0 25 2.5219154452189526E-4 0.0 0.0 4.79083233297354 0.0 26 2.5219154452189526E-4 0.0 0.0 4.8974589179973975 0.0 27 2.5219154452189526E-4 0.0 0.0 4.987339984465001 0.0 28 3.026298534262743E-4 0.0 0.0 5.092402981912822 0.0 29 3.026298534262743E-4 0.0 0.0 5.194893625606521 0.0 30 3.026298534262743E-4 0.0 0.0 5.354429996671072 0.0 31 3.026298534262743E-4 0.0 0.0 5.507005881106818 0.0 32 3.026298534262743E-4 0.0 0.0 5.628410890639659 0.0 33 3.026298534262743E-4 0.0 0.0 5.7429058518525995 0.0 34 3.026298534262743E-4 0.0 0.0 5.874247208239602 0.0 35 3.026298534262743E-4 0.0 0.0 6.069998285097498 0.0 36 3.026298534262743E-4 0.0 0.0 6.201995339500257 0.0 37 3.026298534262743E-4 0.0 0.0 6.339187539720168 0.0 38 3.026298534262743E-4 0.0 0.0 6.458726331823547 0.0 39 3.026298534262743E-4 0.0 0.0 6.5885041006345135 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCACGGT 45 3.8562575E-10 45.000004 22 CTAGAGT 45 3.8562575E-10 45.000004 37 CTATGCG 45 3.8562575E-10 45.000004 1 ACACGAA 65 0.0 45.000004 10 GCGACAA 35 1.2125201E-7 45.000004 23 TCCGATT 35 1.2125201E-7 45.000004 17 ATCACGC 35 1.2125201E-7 45.000004 18 ACGGACG 45 3.8562575E-10 45.000004 28 TCGTCGG 45 3.8562575E-10 45.000004 17 CGAATGT 45 3.8562575E-10 45.000004 16 TACTCCG 45 3.8562575E-10 45.000004 14 GTTCACG 35 1.2125201E-7 45.000004 1 CGATGTC 70 0.0 45.000004 10 CGAGAAT 45 3.8562575E-10 45.000004 42 ACCCGTT 35 1.2125201E-7 45.000004 32 GTCTTCG 35 1.2125201E-7 45.000004 14 AGTAGTC 45 3.8562575E-10 45.000004 40 CGACTTG 35 1.2125201E-7 45.000004 29 ATCGGAA 45 3.8562575E-10 45.000004 25 ACCCCGA 35 1.2125201E-7 45.000004 44 >>END_MODULE