##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545318_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3094252 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.29319880862968 31.0 31.0 33.0 30.0 34.0 2 31.61538426734474 31.0 31.0 34.0 30.0 34.0 3 31.713060539348444 31.0 31.0 34.0 30.0 34.0 4 30.25965112085247 35.0 33.0 37.0 0.0 37.0 5 32.84233701715309 35.0 33.0 37.0 19.0 37.0 6 34.48360346862505 35.0 33.0 37.0 30.0 37.0 7 35.51184971359799 36.0 35.0 37.0 33.0 37.0 8 35.71445473736463 37.0 35.0 37.0 35.0 37.0 9 37.783643995382405 39.0 37.0 39.0 35.0 39.0 10 37.19909399751539 39.0 37.0 39.0 33.0 39.0 11 36.695093353741065 39.0 35.0 39.0 32.0 39.0 12 35.39943546938 35.0 35.0 39.0 31.0 39.0 13 34.9007524274041 35.0 34.0 39.0 30.0 39.0 14 35.65812351418049 36.0 34.0 40.0 30.0 41.0 15 36.04299876028197 37.0 35.0 40.0 31.0 41.0 16 36.27914177642933 36.0 35.0 40.0 32.0 41.0 17 36.22405124081684 36.0 35.0 40.0 31.0 41.0 18 36.22064880300635 36.0 35.0 40.0 31.0 41.0 19 36.19951671680264 36.0 35.0 40.0 31.0 41.0 20 36.080709974494646 36.0 34.0 40.0 31.0 41.0 21 35.8998743476614 36.0 34.0 40.0 31.0 41.0 22 35.72600324731147 36.0 34.0 40.0 30.0 41.0 23 35.70727044856075 35.0 34.0 40.0 30.0 41.0 24 35.65143886147605 35.0 34.0 40.0 30.0 41.0 25 35.53433689305202 35.0 34.0 40.0 30.0 41.0 26 35.38371438396097 35.0 34.0 40.0 30.0 41.0 27 35.359238678685514 35.0 34.0 40.0 30.0 41.0 28 35.444537484341936 36.0 34.0 40.0 30.0 41.0 29 35.53634157786761 36.0 34.0 40.0 30.0 41.0 30 35.493983683294054 36.0 34.0 40.0 30.0 41.0 31 35.339170500657346 35.0 34.0 40.0 30.0 41.0 32 35.22516459551452 35.0 34.0 40.0 29.0 41.0 33 35.09622584068783 35.0 34.0 40.0 29.0 41.0 34 35.03703027419874 35.0 34.0 40.0 29.0 41.0 35 34.913762679962716 35.0 34.0 40.0 29.0 41.0 36 34.72868984168064 35.0 33.0 40.0 27.0 41.0 37 34.65962468473803 35.0 33.0 40.0 27.0 41.0 38 34.66431499438313 35.0 33.0 40.0 27.0 41.0 39 34.654756626157145 35.0 33.0 40.0 27.0 41.0 40 34.557246468613414 35.0 33.0 40.0 27.0 41.0 41 34.5899109057698 35.0 34.0 40.0 27.0 41.0 42 34.530906338591684 35.0 33.0 40.0 27.0 41.0 43 34.42875628746463 35.0 33.0 39.0 27.0 41.0 44 34.36761129991998 35.0 33.0 39.0 27.0 41.0 45 34.261729813861315 35.0 33.0 39.0 27.0 41.0 46 34.22533523449286 35.0 33.0 39.0 27.0 41.0 47 34.17293904956674 35.0 33.0 39.0 27.0 41.0 48 34.1153677851707 35.0 33.0 39.0 27.0 41.0 49 34.10623795346985 35.0 33.0 39.0 26.0 41.0 50 33.91772131035223 35.0 33.0 39.0 26.0 40.0 51 33.83251913548089 35.0 33.0 38.0 26.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 0.0 12 1.0 13 1.0 14 9.0 15 44.0 16 191.0 17 565.0 18 1269.0 19 2688.0 20 4808.0 21 7636.0 22 11702.0 23 16932.0 24 24628.0 25 33573.0 26 44103.0 27 54119.0 28 65391.0 29 80016.0 30 98571.0 31 124597.0 32 160755.0 33 237653.0 34 366845.0 35 515795.0 36 211798.0 37 259214.0 38 343733.0 39 427388.0 40 226.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.982270351606786 25.321208485928103 32.24844001070372 12.448081151761395 2 27.119025858268813 26.776810679931696 32.33999687161873 13.76416659018076 3 28.12046336238936 26.080842801426645 31.50538482321414 14.293309012969853 4 21.691995351380562 39.489414566105154 25.781739819510495 13.036850263003789 5 23.022882428451204 32.619159654740464 29.798639541963617 14.559318374844713 6 21.66892030771896 40.611947572466626 26.22672620071022 11.492405919104197 7 90.77531500343217 3.823347290395223 3.85783058393434 1.5435071222382661 8 93.282673809373 2.0800826823413217 3.06002872422802 1.5772147840576658 9 90.5560374526703 3.5370745498427407 4.028728106178812 1.8781598913081416 10 63.22949779138868 21.311257130964123 7.093927708538283 8.365317369108915 11 53.90679233624153 17.833906223539646 16.12363828156207 12.13566315865676 12 47.07056826657945 21.28100749389513 18.25875849801503 13.389665741510386 13 20.479812245415047 45.37429401354511 20.272169170448947 13.87372457059089 14 13.559626042093534 45.654749516199715 25.889875808434475 14.895748633272273 15 12.889350964304136 22.324813880705253 51.07651219099155 13.709322963999055 16 15.488816036961436 17.378254906193806 48.06476654131596 19.068162515528794 17 16.02367874368345 18.659663143144126 25.899215707059415 39.41744240611301 18 23.079762087897173 23.190386561921912 32.60206343891836 21.127787911262562 19 32.880159728425475 24.26143701288712 21.651468594025307 21.20693466466209 20 34.95041774231705 23.816127451804185 21.85665550187897 19.376799303999803 21 24.282443705296142 29.4252698228845 25.681101603877128 20.611184867942235 22 25.065637834281112 24.75926330499261 22.307329849023287 27.867769011702993 23 21.571029121092916 31.650848088649536 22.19719014482337 24.580932645434178 24 20.953109184384466 22.687324755708328 39.13168675337367 17.227879306533534 25 17.111114414727695 25.766291821092786 35.529814636946185 21.592779127233335 26 17.351915745711725 37.693827134958624 24.390256514336905 20.564000604992742 27 18.423741828396654 35.875132342162175 27.45060841844814 18.250517410993027 28 15.285826752313644 28.10217138099935 39.64253719477276 16.969464671914245 29 15.462024424642854 24.69546759604583 37.703684121396705 22.13882385791461 30 19.628330207106597 32.109440342932636 29.30879579297355 18.953433656987215 31 32.95006353716504 25.72605592563243 22.159604324405382 19.164276212797148 32 34.254223637893745 25.769038850100124 23.399774808257376 16.57696270374876 33 30.509150515213367 26.581157578632897 22.64010817477051 20.26958373138322 34 19.479990640710582 26.711754569440373 27.145817470587396 26.66243731926165 35 20.870472088246206 24.213250892299655 31.517213206939836 23.3990638125143 36 33.49316733090905 23.222284416395304 24.61858310182881 18.665965150866835 37 21.042403786116967 33.082631925260124 27.518831691794983 18.356132596827926 38 20.711305995762466 34.79574385021 21.756792917965313 22.736157236062223 39 21.531924355223815 32.59492116349929 25.009856986438077 20.863297494838818 40 25.67544595592085 24.551846455944766 22.87105251931646 26.901655068817927 41 17.441113393479263 22.769994169834906 26.006866926158565 33.78202551052726 42 22.642305797976377 24.35871415773505 22.313276358874454 30.68570368541412 43 22.22740746390404 25.40158332288385 24.98355014394432 27.387459069267788 44 19.554128105920267 30.979700425175455 27.0430462677248 22.423125201179477 45 17.183442072591372 39.019607969874464 20.912388519099284 22.88456143843488 46 22.46659289547199 33.42681850088486 24.39403771897053 19.712550884672613 47 21.87672497262666 25.516441453378718 26.59356768614838 26.013265887846238 48 23.207676685673952 21.356987084439147 32.50468934010546 22.93064688978144 49 21.191777528139273 21.98977329577552 33.24153947383729 23.57690970224791 50 19.115734594338146 34.05579118959929 25.074299055151293 21.754175160911263 51 17.506137185982265 35.06896012348057 23.187768804867865 24.237133885669298 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 332.0 1 764.5 2 1197.0 3 3657.0 4 6117.0 5 4668.0 6 3219.0 7 3578.0 8 3937.0 9 4370.5 10 4804.0 11 4998.5 12 5193.0 13 5259.5 14 5326.0 15 4890.0 16 4454.0 17 4705.5 18 4957.0 19 4691.5 20 4426.0 21 5708.0 22 6990.0 23 7971.0 24 8952.0 25 10714.0 26 14331.0 27 16186.0 28 19364.0 29 22542.0 30 26936.5 31 31331.0 32 40788.0 33 50245.0 34 56853.5 35 63462.0 36 69913.0 37 76364.0 38 107707.0 39 139050.0 40 202249.0 41 265448.0 42 311353.0 43 357258.0 44 350336.0 45 343414.0 46 323367.5 47 303321.0 48 276857.5 49 250394.0 50 237160.0 51 223926.0 52 197443.0 53 170960.0 54 162606.5 55 154253.0 56 141497.5 57 128742.0 58 123546.0 59 118350.0 60 111646.5 61 104943.0 62 89057.5 63 73172.0 64 59650.5 65 46129.0 66 38956.5 67 31784.0 68 26197.5 69 20611.0 70 16594.5 71 12578.0 72 10705.5 73 8833.0 74 6532.5 75 3252.5 76 2273.0 77 1723.5 78 1174.0 79 967.0 80 760.0 81 435.0 82 110.0 83 63.5 84 17.0 85 11.5 86 6.0 87 4.5 88 3.0 89 2.0 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3094252.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 14.19523580258257 #Duplication Level Percentage of deduplicated Percentage of total 1 77.88478119800006 11.0559283453816 2 9.729727340295764 2.7623154778066583 3 3.4890848338598373 1.4858514585556504 4 1.6642876791497765 0.9449982419545582 5 0.9502300891725377 0.6744370091256618 6 0.61897105450026 0.5271864044162627 7 0.39346221367445655 0.39097022317605273 8 0.2971335324950167 0.3374304446896873 9 0.2134625197506337 0.2727135722586316 >10 1.7919377551932483 5.950564930685146 >50 0.8398374861116383 8.816501596479904 >100 2.0829611181105854 62.38575119019546 >500 0.040157051175052465 3.5871275596021444 >1k 0.003966128511116293 0.8082235456725978 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.231798832157174E-5 0.0 0.0 0.052872228894091364 0.0 2 3.231798832157174E-5 0.0 0.0 0.17965569707961732 0.0 3 3.231798832157174E-5 0.0 0.0 0.2637147847040254 0.0 4 3.231798832157174E-5 0.0 0.0 0.475042110338783 0.0 5 3.231798832157174E-5 0.0 0.0 0.7880418272332053 0.0 6 3.231798832157174E-5 0.0 0.0 1.1070850079437615 0.0 7 3.231798832157174E-5 0.0 0.0 1.275558681064115 0.0 8 3.231798832157174E-5 0.0 0.0 1.6923314584591043 0.0 9 3.231798832157174E-5 0.0 0.0 1.8083853545218682 0.0 10 3.231798832157174E-5 0.0 0.0 1.9866190601153364 0.0 11 3.231798832157174E-5 0.0 0.0 2.30314143773681 0.0 12 3.231798832157174E-5 0.0 0.0 2.5536381652173126 0.0 13 3.231798832157174E-5 0.0 0.0 2.6489762307659492 0.0 14 3.231798832157174E-5 0.0 0.0 2.6788380519750814 0.0 15 3.231798832157174E-5 0.0 0.0 2.7319688247757457 0.0 16 3.231798832157174E-5 0.0 0.0 2.85810593319484 0.0 17 3.231798832157174E-5 0.0 0.0 3.0178214314800473 0.0 18 3.231798832157174E-5 0.0 0.0 3.2063322573597755 0.0 19 3.231798832157174E-5 0.0 0.0 3.322709333305755 0.0 20 6.463597664314348E-5 0.0 0.0 3.448006174028489 0.0 21 6.463597664314348E-5 0.0 0.0 3.6189683322496036 0.0 22 9.695396496471522E-5 0.0 0.0 3.778231378698309 0.0 23 9.695396496471522E-5 0.0 0.0 3.958436481579393 0.0 24 9.695396496471522E-5 0.0 0.0 4.085672401601421 0.0 25 9.695396496471522E-5 0.0 0.0 4.195424289941479 0.0 26 9.695396496471522E-5 0.0 0.0 4.303915776736995 0.0 27 9.695396496471522E-5 0.0 0.0 4.399577022168847 0.0 28 1.615899416078587E-4 0.0 0.0 4.506678835466536 0.0 29 1.9390792992943044E-4 0.0 0.0 4.629260965170258 0.0 30 1.9390792992943044E-4 0.0 0.0 4.786940430191206 0.0 31 2.2622591825100218E-4 0.0 0.0 4.942907041831111 0.0 32 2.2622591825100218E-4 0.0 0.0 5.070110643864818 0.0 33 2.2622591825100218E-4 0.0 0.0 5.198897827326281 0.0 34 2.2622591825100218E-4 0.0 0.0 5.345298314423001 0.0 35 2.585439065725739E-4 0.0 0.0 5.540563599861938 0.0 36 2.9086189489414566E-4 0.0 0.0 5.694332588295976 0.0 37 2.9086189489414566E-4 0.0 0.0 5.854080404569505 0.0 38 2.9086189489414566E-4 0.0 0.0 6.008689660699904 0.0 39 3.231798832157174E-4 0.0 0.0 6.158742080476962 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGGAAT 55 1.8189894E-12 45.000004 34 TCACGCA 20 7.0351403E-4 45.0 17 GTCGATC 20 7.0351403E-4 45.0 6 ACGCATT 20 7.0351403E-4 45.0 17 CTATCGT 25 3.892342E-5 45.0 33 ACGTTAC 70 0.0 45.0 32 CGCATTA 35 1.2128294E-7 45.0 11 CGTTGTA 45 3.8562575E-10 45.0 36 TAGCGGA 35 1.2128294E-7 45.0 3 CGCGCGA 35 1.2128294E-7 45.0 44 AATGCGT 35 1.2128294E-7 45.0 37 TACGCAC 20 7.0351403E-4 45.0 36 CTACGCA 20 7.0351403E-4 45.0 35 TACGACC 35 1.2128294E-7 45.0 36 CGTAAGT 20 7.0351403E-4 45.0 19 ACGTAAC 50 2.1827873E-11 45.0 16 CACGTTA 70 0.0 45.0 31 CGACTCG 35 1.2128294E-7 45.0 2 CGGTAAT 70 0.0 45.0 18 TGTACGA 25 3.892342E-5 45.0 22 >>END_MODULE