##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545317_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2556712 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.264226475254155 31.0 31.0 33.0 30.0 34.0 2 31.586493511979448 31.0 31.0 34.0 30.0 34.0 3 31.68585120263839 31.0 31.0 34.0 30.0 34.0 4 30.29441016430478 35.0 33.0 37.0 0.0 37.0 5 32.86035697411363 35.0 33.0 37.0 19.0 37.0 6 34.490413859676025 35.0 33.0 37.0 30.0 37.0 7 35.51765548876838 36.0 35.0 37.0 33.0 37.0 8 35.71117513431313 37.0 35.0 37.0 35.0 37.0 9 37.738162139497916 39.0 37.0 39.0 35.0 39.0 10 37.113256792317635 39.0 37.0 39.0 33.0 39.0 11 36.671622771747465 39.0 35.0 39.0 32.0 39.0 12 35.854788885099296 37.0 35.0 39.0 31.0 39.0 13 35.52770550613444 37.0 35.0 39.0 30.0 39.0 14 36.43775051707036 38.0 35.0 40.0 31.0 41.0 15 36.69262044375745 38.0 35.0 40.0 31.0 41.0 16 36.83740874998826 38.0 35.0 40.0 32.0 41.0 17 36.76248595852798 38.0 35.0 40.0 32.0 41.0 18 36.74462943029954 38.0 35.0 40.0 31.0 41.0 19 36.748577860940145 38.0 35.0 40.0 31.0 41.0 20 36.66376502320168 38.0 35.0 40.0 31.0 41.0 21 36.50807521535472 38.0 35.0 40.0 31.0 41.0 22 36.38130849309582 38.0 35.0 40.0 31.0 41.0 23 36.32531783008802 38.0 35.0 40.0 31.0 41.0 24 36.27737774141163 38.0 35.0 40.0 31.0 41.0 25 36.17962993094255 38.0 35.0 40.0 30.0 41.0 26 36.04598758092425 38.0 34.0 40.0 30.0 41.0 27 36.06201637102654 38.0 34.0 40.0 30.0 41.0 28 36.07015651352206 38.0 35.0 40.0 30.0 41.0 29 36.13919010041021 38.0 35.0 40.0 30.0 41.0 30 36.06543091282867 38.0 35.0 40.0 30.0 41.0 31 35.98756606141012 38.0 34.0 40.0 30.0 41.0 32 35.89828498477733 38.0 34.0 40.0 30.0 41.0 33 35.79439725710209 37.0 34.0 40.0 30.0 41.0 34 35.73327500320725 37.0 34.0 40.0 30.0 41.0 35 35.6189637315427 37.0 34.0 40.0 29.0 41.0 36 35.47012999508744 37.0 34.0 40.0 29.0 41.0 37 35.43984930645298 37.0 34.0 40.0 29.0 41.0 38 35.41230533591582 37.0 34.0 40.0 29.0 41.0 39 35.3614220138991 37.0 34.0 40.0 29.0 41.0 40 35.26744545337918 37.0 34.0 40.0 28.0 41.0 41 35.24643252740238 37.0 34.0 40.0 28.0 41.0 42 35.185061907637625 36.0 34.0 40.0 28.0 41.0 43 35.137575526692096 36.0 34.0 40.0 28.0 41.0 44 35.068215739590535 36.0 34.0 40.0 28.0 41.0 45 34.96761113492642 36.0 34.0 40.0 27.0 41.0 46 34.92097154470273 36.0 34.0 40.0 27.0 41.0 47 34.85432461692987 36.0 33.0 40.0 27.0 41.0 48 34.76023971413284 36.0 34.0 40.0 27.0 41.0 49 34.722851850345286 36.0 34.0 40.0 27.0 41.0 50 34.59464108589469 35.0 33.0 40.0 27.0 41.0 51 34.51344695843724 35.0 33.0 39.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 3.0 13 2.0 14 11.0 15 40.0 16 148.0 17 366.0 18 919.0 19 1795.0 20 3290.0 21 5154.0 22 8065.0 23 12138.0 24 17370.0 25 23760.0 26 31474.0 27 39298.0 28 48143.0 29 59473.0 30 73793.0 31 93217.0 32 120031.0 33 169551.0 34 249354.0 35 334258.0 36 196269.0 37 257234.0 38 352010.0 39 459336.0 40 210.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.061608816323464 25.357998867295183 30.2199074436229 12.36048487275845 2 28.123425712399364 26.648249783315446 31.845393614924166 13.382930889361022 3 29.222219788540908 26.493167787376915 31.004939156228783 13.279673267853397 4 22.191236244050952 38.92765395554916 26.326664872695872 12.55444492770402 5 23.846017854181465 32.98932378773988 29.023135965255374 14.141522392823283 6 22.46541651934203 41.90874842375676 25.227714345612647 10.398120711288561 7 91.48746515055274 3.686257975086752 3.454554130461311 1.3717227438991957 8 93.3791525991195 2.2610681218690254 2.9207435174552314 1.4390357615562488 9 89.53832109365466 4.693645588552798 3.921833980518729 1.846199337273811 10 51.93737112353679 31.917556611773247 7.950211052320324 8.194861212369638 11 42.3512699122936 21.049691948095838 22.79009133605975 13.808946803550812 12 40.030750432586856 22.815006148522006 22.178837506922953 14.975405911968185 13 21.78755370178573 38.048282325111316 22.98792355181186 17.176240421291094 14 15.820710349855597 39.85708988732403 26.36534736802581 17.956852394794566 15 15.742523991751906 26.01415411669363 42.711771994655635 15.53154989689883 16 18.84451592514135 21.83773534132902 41.25752137902118 18.060227354508445 17 19.04899730591478 23.026058468845925 26.01176823983303 31.913175985406255 18 22.868082130486343 26.685837122053634 30.409291308524388 20.03678943893563 19 29.857606175431574 27.322279552800627 23.02214719530397 19.79796707646383 20 33.06043074073263 25.864821692861767 23.61278861287466 17.46195895353094 21 25.40247004746722 28.725683612389663 26.05921198789696 19.812634352246167 22 24.951500208079754 25.64140974814527 25.22126074426842 24.185829299506555 23 22.066779519945932 30.931954791935894 24.707945204622188 22.29332048349599 24 20.85084280122282 24.867798954281906 35.881319444661735 18.40003879983354 25 19.211510721583032 27.933455156466586 32.28243932050227 20.572594801448112 26 19.452210495354972 36.377151591575426 24.801385529539502 19.369252383530096 27 20.23599060042742 33.51542919186831 27.25465363326022 18.99392657444405 28 16.70782630190651 30.33098761221444 35.81107297184822 17.150113114030834 29 18.72185838686563 26.445997828460932 33.9700756283852 20.86206815628823 30 21.00909292873034 30.58134823163501 28.18968268620009 20.21987615343457 31 28.236539743232715 28.001550428832033 23.44452562509974 20.317384202835516 32 30.16213793340822 27.80911577056782 24.410727528168994 17.618018767854966 33 26.981255612677536 29.21592263813836 24.949466345837937 18.85335540334617 34 20.34448932848127 28.625789686128122 27.550111236619536 23.479609748771075 35 21.613228240020778 26.444511544514988 29.25945511266032 22.68280510280391 36 28.275691591387687 26.84291386749857 25.316891382369235 19.56450315874451 37 21.907629799523765 31.99981069436057 27.389670795928524 18.702888710187146 38 21.08708372315693 32.53283905265826 23.92177922268914 22.45829800149567 39 21.421341160052442 31.76239639036387 26.84412636229657 19.972136087287108 40 24.508118239363682 26.267761093154018 25.653378245183657 23.57074242229864 41 18.030579901060424 25.837833905422276 27.89692386158472 28.234662331932576 42 21.96516463332593 27.042740832757072 24.507805337480328 26.484289196436674 43 22.23523807139795 28.696153497147897 25.35819443097228 23.71041400048187 44 20.924061841928225 29.92315911999474 27.431404084621185 21.721374953455843 45 18.591652090653934 34.59509714038968 23.363132022691644 23.450118746264735 46 21.27928370500862 32.35186442587198 25.553445206186698 20.815406662932702 47 22.151341253923007 26.850931978259577 27.477009534120384 23.52071723369703 48 22.817900490943053 23.32491888018674 31.17175497279318 22.685425656077022 49 20.781495921323952 25.4512436285354 31.066541714514578 22.70071873562607 50 19.101486596847828 32.24758987324345 26.311802033236436 22.339121496672288 51 18.380638883065437 33.57104750163491 24.4047432796498 23.643570335649848 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 158.0 1 617.5 2 1077.0 3 3283.5 4 5490.0 5 4224.0 6 2958.0 7 3101.5 8 3245.0 9 3409.5 10 3574.0 11 4045.5 12 4517.0 13 4201.5 14 3886.0 15 3816.0 16 3746.0 17 4003.5 18 4261.0 19 5360.5 20 6460.0 21 6446.5 22 6433.0 23 8110.5 24 9788.0 25 13618.0 26 22464.5 27 27481.0 28 34119.0 29 40757.0 30 48419.5 31 56082.0 32 62968.0 33 69854.0 34 76772.5 35 83691.0 36 90217.5 37 96744.0 38 109399.0 39 122054.0 40 160526.5 41 198999.0 42 227046.5 43 255094.0 44 252559.5 45 250025.0 46 229544.0 47 209063.0 48 198918.5 49 188774.0 50 178311.5 51 167849.0 52 158768.5 53 149688.0 54 136884.0 55 124080.0 56 113372.0 57 102664.0 58 100533.5 59 98403.0 60 92806.5 61 87210.0 62 73721.5 63 60233.0 64 48014.5 65 35796.0 66 28502.5 67 21209.0 68 17493.0 69 13777.0 70 11606.5 71 9436.0 72 8585.0 73 7734.0 74 5519.0 75 2770.0 76 2236.0 77 1456.0 78 676.0 79 541.5 80 407.0 81 341.5 82 276.0 83 164.0 84 52.0 85 32.0 86 12.0 87 10.0 88 8.0 89 5.0 90 2.0 91 1.0 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2556712.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.18117612472706 #Duplication Level Percentage of deduplicated Percentage of total 1 78.04488019786191 12.62857952114827 2 8.670197038228348 2.8058797062331964 3 2.9939037193774443 1.4533465015116553 4 1.383987737770631 0.895781973573166 5 0.8253837192635364 0.667783966594278 6 0.5510306334566724 0.5349794238049401 7 0.38512100764952717 0.4362197597876549 8 0.2808571773977349 0.36356795626931687 9 0.22344139621718576 0.32539901271706856 >10 3.0928175309920163 12.78675388558238 >50 1.690352904403495 20.023329537466715 >100 1.851435384462731 46.093318167946634 >500 0.005009580218229583 0.5332100663036183 >1k 0.001581972700493553 0.45185052106109946 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0457227877054592 0.0 2 0.0 0.0 0.0 0.1439739790793801 0.0 3 0.0 0.0 0.0 0.20045276902521678 0.0 4 0.0 0.0 0.0 0.3298768105285226 0.0 5 0.0 0.0 0.0 0.5616979933602221 0.0 6 0.0 0.0 0.0 0.7856966291080106 0.0 7 0.0 0.0 0.0 0.9096057749171592 0.0 8 0.0 0.0 0.0 1.2373704977330258 0.0 9 0.0 0.0 0.0 1.3241616576290172 0.0 10 0.0 0.0 0.0 1.4749803654068194 0.0 11 0.0 0.0 0.0 1.7351191686822762 0.0 12 0.0 0.0 0.0 1.9556367709777245 0.0 13 0.0 0.0 0.0 2.0437186511425613 0.0 14 0.0 0.0 0.0 2.0739136828864573 0.0 15 0.0 0.0 0.0 2.1221396856587678 0.0 16 0.0 0.0 0.0 2.2386956372090405 0.0 17 0.0 0.0 0.0 2.3932300548517 0.0 18 0.0 0.0 0.0 2.554257186574006 0.0 19 0.0 0.0 0.0 2.6674494428781967 0.0 20 0.0 0.0 0.0 2.782049757657491 0.0 21 0.0 0.0 0.0 2.9377575573627377 0.0 22 0.0 0.0 0.0 3.1207269336554138 0.0 23 0.0 0.0 0.0 3.3065906523691364 0.0 24 3.911273541955449E-5 0.0 0.0 3.445636426785653 0.0 25 3.911273541955449E-5 0.0 0.0 3.5642653533131616 0.0 26 3.911273541955449E-5 0.0 0.0 3.6735854488108166 0.0 27 3.911273541955449E-5 0.0 0.0 3.780637005654137 0.0 28 3.911273541955449E-5 0.0 0.0 3.8998917359483585 0.0 29 3.911273541955449E-5 0.0 0.0 4.034517771262466 0.0 30 3.911273541955449E-5 0.0 0.0 4.204853734014625 0.0 31 3.911273541955449E-5 0.0 0.0 4.366897796857839 0.0 32 3.911273541955449E-5 0.0 0.0 4.510480648583024 0.0 33 3.911273541955449E-5 0.0 0.0 4.65038690317877 0.0 34 3.911273541955449E-5 0.0 0.0 4.8004233562481815 0.0 35 3.911273541955449E-5 0.0 0.0 4.989220530118371 0.0 36 3.911273541955449E-5 0.0 0.0 5.168474196546189 0.0 37 3.911273541955449E-5 0.0 0.0 5.339670639477579 0.0 38 7.822547083910898E-5 0.0 0.0 5.5121969154132335 0.0 39 1.1733820625866348E-4 0.0 0.0 5.711632753317542 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGGATC 30 2.1665492E-6 45.000004 18 ACCCGTA 35 1.212702E-7 45.000004 33 ACCCACG 30 2.1665492E-6 45.000004 32 CGTTGTA 25 3.8921513E-5 45.0 19 TCGAACG 20 7.0349104E-4 45.0 1 GCGATAT 215 0.0 41.860466 9 CAATTCG 70 0.0 41.785717 1 TTACGAG 125 0.0 41.399998 1 CGGGTAT 160 0.0 40.78125 6 ATAGCGG 555 0.0 40.54054 2 CTAAGCG 200 0.0 40.5 1 CGCTAAT 45 1.9299478E-8 40.0 19 ATACGGT 45 1.9299478E-8 40.0 10 ATTTGCG 210 0.0 39.64286 1 CGTTTTT 2560 0.0 39.63867 1 AACGCGC 40 3.4604454E-7 39.375 30 ACTCGTT 40 3.4604454E-7 39.375 25 TGTAGCG 400 0.0 38.8125 1 CGTAAGG 425 0.0 38.64706 2 CGTAGGT 35 6.25129E-6 38.57143 5 >>END_MODULE