##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545314_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1854110 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.31751406335115 31.0 31.0 33.0 30.0 34.0 2 31.64056016093975 31.0 31.0 34.0 30.0 34.0 3 31.74670380937485 31.0 31.0 34.0 30.0 34.0 4 30.320602876851968 35.0 33.0 37.0 0.0 37.0 5 32.905428480510864 35.0 33.0 37.0 19.0 37.0 6 34.55915344828516 35.0 33.0 37.0 30.0 37.0 7 35.513824422499205 36.0 35.0 37.0 33.0 37.0 8 35.6794774851546 37.0 35.0 37.0 35.0 37.0 9 37.703292684900035 39.0 37.0 39.0 35.0 39.0 10 37.19977293688077 39.0 37.0 39.0 34.0 39.0 11 36.75382690347391 39.0 35.0 39.0 32.0 39.0 12 35.725252547044136 37.0 35.0 39.0 31.0 39.0 13 35.3130164876949 37.0 35.0 39.0 30.0 39.0 14 36.173708140293726 38.0 35.0 40.0 31.0 41.0 15 36.483843461283314 38.0 35.0 40.0 31.0 41.0 16 36.66754345750792 38.0 35.0 40.0 32.0 41.0 17 36.59185970627417 38.0 35.0 40.0 32.0 41.0 18 36.58667716586395 38.0 35.0 40.0 31.0 41.0 19 36.56464341382119 38.0 35.0 40.0 31.0 41.0 20 36.45466342342148 38.0 35.0 40.0 31.0 41.0 21 36.26756988528189 37.0 35.0 40.0 31.0 41.0 22 36.13540458764582 37.0 35.0 40.0 31.0 41.0 23 36.07836590062078 37.0 34.0 40.0 31.0 41.0 24 36.01233260162558 37.0 34.0 40.0 30.0 41.0 25 35.89816839346101 37.0 34.0 40.0 30.0 41.0 26 35.722311513340635 36.0 34.0 40.0 30.0 41.0 27 35.73036227624035 36.0 34.0 40.0 30.0 41.0 28 35.73148680499 36.0 34.0 40.0 30.0 41.0 29 35.78851686253782 36.0 34.0 40.0 30.0 41.0 30 35.76528900658537 36.0 34.0 40.0 30.0 41.0 31 35.68006590763223 36.0 34.0 40.0 30.0 41.0 32 35.56864910927615 36.0 34.0 40.0 30.0 41.0 33 35.43011957219367 36.0 34.0 40.0 29.0 41.0 34 35.33053810183862 36.0 34.0 40.0 29.0 41.0 35 35.23853061576713 36.0 34.0 40.0 29.0 41.0 36 35.05316081570133 36.0 34.0 40.0 27.0 41.0 37 34.99084520335902 36.0 34.0 40.0 27.0 41.0 38 34.97893814282863 35.0 34.0 40.0 28.0 41.0 39 34.90276844415919 35.0 34.0 40.0 27.0 41.0 40 34.7333146361327 35.0 33.0 40.0 27.0 41.0 41 34.703327742151224 35.0 34.0 40.0 27.0 41.0 42 34.65987131292103 35.0 33.0 40.0 27.0 41.0 43 34.6223066592597 35.0 33.0 40.0 27.0 41.0 44 34.5330363354925 35.0 33.0 40.0 27.0 41.0 45 34.443095609214126 35.0 33.0 39.0 27.0 41.0 46 34.38051517978977 35.0 33.0 39.0 27.0 41.0 47 34.30400407742798 35.0 33.0 39.0 27.0 41.0 48 34.229582926579326 35.0 33.0 39.0 26.0 41.0 49 34.1868049899952 35.0 33.0 39.0 26.0 41.0 50 34.02352503357406 35.0 33.0 39.0 26.0 40.0 51 33.9276278106477 35.0 33.0 39.0 26.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 1.0 13 10.0 14 11.0 15 29.0 16 111.0 17 289.0 18 691.0 19 1428.0 20 2582.0 21 4134.0 22 6396.0 23 9328.0 24 13332.0 25 18339.0 26 24657.0 27 31005.0 28 37009.0 29 44973.0 30 56196.0 31 71044.0 32 91055.0 33 134002.0 34 203650.0 35 275400.0 36 143667.0 37 180895.0 38 228170.0 39 275524.0 40 180.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.038174649831994 26.246123477032107 29.445502154672592 12.270199718463305 2 28.269358344434796 27.03259245675823 31.288596685202062 13.409452513604911 3 29.697375020899514 25.793669199777792 30.09735128983717 14.411604489485521 4 23.23939787822729 39.33051437077628 24.65668164240525 12.773406108591184 5 24.36317154861362 33.029485844960654 28.314501297118294 14.29284130930743 6 22.782628862365232 41.93893566185394 24.502052197550306 10.776383278230526 7 90.55012917248708 3.996958109281542 3.776043492565166 1.6768692256662225 8 91.81645101962667 2.941950585456095 3.459988889548085 1.7816095053691527 9 87.89785935030824 4.729223185247909 4.827221685876242 2.5456957785676146 10 59.25743348560765 21.663169930586644 9.15851810302517 9.920878480780535 11 50.76753806408465 20.498675914589747 15.063615427347893 13.670170593977705 12 47.5325627929303 20.729244758940947 18.098332892870435 13.639859555258319 13 23.78585952289778 39.18386719234566 18.778119960520144 18.252153324236424 14 15.444552912178889 41.96040148642745 23.649513782893138 18.945531818500523 15 15.755807368494857 24.07963928785239 44.69907394922632 15.465479394426437 16 18.579965589959606 17.87973744815572 44.639800227602464 18.900496734282214 17 18.222489496308203 19.636591140762956 25.453829600185536 36.68708976274331 18 23.465382312807762 26.081731936077148 27.362238486389696 23.090647264725394 19 33.57050013213887 25.609915269320588 20.325223422558533 20.494361175982007 20 38.338825636019436 22.938390926104706 20.531683664938974 18.19109977293688 21 26.992573256171426 27.501334872256773 23.048740365997702 22.457351505574103 22 25.09139155713523 26.45625124722913 21.022161576174014 27.430195619461628 23 25.479124755273418 30.400677413961414 20.87621554276715 23.243982287998016 24 24.019664421204784 22.95910167142187 33.197383111034405 19.82385079633894 25 21.065902238809993 24.824471040013808 30.87891225439699 23.230714466779208 26 20.60454881317721 36.306637686005686 22.3020209156954 20.786792585121702 27 23.150298525977423 33.18638052758466 24.717789127937394 18.945531818500523 28 18.829519284184865 30.28202210224852 33.591965956712386 17.29649265685423 29 19.894127101412536 26.117490332288806 31.950100048001467 22.03828251829719 30 21.85382744281623 29.785665359660427 26.64485925862004 21.715647938903302 31 31.127818737831088 27.43785428049037 19.604014864274504 21.830312117404038 32 34.149214447902224 27.15696479712638 20.990070707778933 17.703750047192454 33 30.500617546963234 27.59739174051162 21.21929119631521 20.682699516209937 34 21.73107312942598 28.01667646471892 24.844372771842018 25.407877634013083 35 24.277739724180332 23.854733537923856 26.29854755111617 25.56897918677964 36 30.737604564993447 26.30690735716867 21.890826326377617 21.06466175146027 37 24.508092831601143 32.49677742960234 24.62383569475382 18.371294044042692 38 23.46991278834589 32.074256651439235 20.570084838547874 23.885745721667 39 24.87085448004703 29.713231685282963 23.851605352433243 21.56430848223676 40 26.316399782105698 24.92683821348248 23.870320531144323 24.8864414732675 41 18.225294076403234 24.635377620529525 26.12730636262142 31.012021940445823 42 23.841034242844277 26.619833774695135 20.981549099028644 28.55758288343194 43 24.104017560986133 27.893059203607123 22.301805178765015 25.701118056641732 44 22.827502143885745 30.524672214701393 24.49579582656908 22.15202981484378 45 20.416749815275253 33.252449962515705 20.41124852355038 25.919551698658655 46 22.009859177718692 33.47244769727794 21.814023979159813 22.70366914584356 47 24.089401383952406 26.073695735420227 25.08400256726947 24.75290031335789 48 25.528798183495045 21.07480138718846 28.448743602051657 24.947656827264833 49 20.605519629363954 25.771933704041295 28.481859220866074 25.140687445728677 50 19.75594759749961 32.671686145913675 23.91125661368527 23.661109642901444 51 18.80519494528372 33.9776496540119 21.413076894035413 25.804078506668972 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 308.0 1 747.0 2 1186.0 3 2844.5 4 4503.0 5 3480.5 6 2458.0 7 2557.0 8 2656.0 9 2873.5 10 3091.0 11 3043.0 12 2995.0 13 2898.0 14 2801.0 15 2764.5 16 2728.0 17 2705.0 18 2682.0 19 2897.5 20 3113.0 21 2873.5 22 2634.0 23 3225.0 24 3816.0 25 5069.0 26 8615.0 27 10908.0 28 14330.0 29 17752.0 30 20639.0 31 23526.0 32 27412.5 33 31299.0 34 33664.0 35 36029.0 36 37065.5 37 38102.0 38 50388.5 39 62675.0 40 93320.0 41 123965.0 42 147272.5 43 170580.0 44 170719.5 45 170859.0 46 159725.0 47 148591.0 48 134944.0 49 121297.0 50 118533.5 51 115770.0 52 111730.0 53 107690.0 54 99533.0 55 91376.0 56 92978.5 57 94581.0 58 103046.0 59 111511.0 60 108673.5 61 105836.0 62 91520.5 63 77205.0 64 63523.0 65 49841.0 66 44129.0 67 38417.0 68 30699.5 69 22982.0 70 19302.5 71 15623.0 72 13850.5 73 12078.0 74 9377.0 75 5129.5 76 3583.0 77 2957.0 78 2331.0 79 1597.0 80 863.0 81 630.0 82 397.0 83 376.0 84 355.0 85 210.0 86 65.0 87 42.5 88 20.0 89 19.5 90 19.0 91 16.5 92 14.0 93 7.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1854110.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.048491326488953 #Duplication Level Percentage of deduplicated Percentage of total 1 78.76689665240474 12.640898577405693 2 8.017119014114884 2.573253299229048 3 2.589172417020046 1.2465693323199194 4 1.2068681245726516 0.7747365051768076 5 0.7041104547576098 0.5649955263033847 6 0.4715265473605329 0.45403738233148777 7 0.33183551693963115 0.37278215907986545 8 0.26576204378502477 0.3412063883675159 9 0.2199556029218069 0.317696002713294 >10 3.6752982103613068 15.467712372625636 >50 2.0225811914622347 23.675101957019617 >100 1.7200740161589319 40.23473870839063 >500 0.006233480766297551 0.6038762153910009 >1k 0.002566727374357815 0.7323955736461115 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 2753 0.14848094233891193 No Hit AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 2321 0.12518135385710666 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1977 0.10662797784381725 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.04816326970891695 0.0 2 0.0 0.0 0.0 0.14368079563779926 0.0 3 0.0 0.0 0.0 0.20538155772850586 0.0 4 0.0 0.0 0.0 0.35979526565306263 0.0 5 0.0 0.0 0.0 0.6068679851788729 0.0 6 0.0 0.0 0.0 0.8675321313190695 0.0 7 0.0 0.0 0.0 1.0067903198839336 0.0 8 0.0 0.0 0.0 1.3406432196579492 0.0 9 0.0 0.0 0.0 1.4341651789807508 0.0 10 0.0 0.0 0.0 1.5843720167627595 0.0 11 0.0 0.0 0.0 1.8366224226178598 0.0 12 0.0 0.0 0.0 2.0315946734551886 0.0 13 0.0 0.0 0.0 2.1183209194707975 0.0 14 0.0 0.0 0.0 2.15235342023936 0.0 15 0.0 0.0 0.0 2.211141733769841 0.0 16 0.0 0.0 0.0 2.3328173625081576 0.0 17 0.0 0.0 0.0 2.476174552750376 0.0 18 0.0 0.0 0.0 2.6322062876528363 0.0 19 0.0 0.0 0.0 2.728964300931444 0.0 20 0.0 0.0 0.0 2.8263695250012133 0.0 21 0.0 0.0 0.0 2.974472927711948 0.0 22 0.0 0.0 0.0 3.134010387733198 0.0 23 0.0 0.0 0.0 3.2968378359428514 0.0 24 0.0 0.0 0.0 3.4191067412397325 0.0 25 0.0 0.0 0.0 3.526543732572501 0.0 26 0.0 0.0 0.0 3.629719919530125 0.0 27 0.0 0.0 0.0 3.7205451672230883 0.0 28 0.0 0.0 0.0 3.82442249920447 0.0 29 0.0 0.0 0.0 3.930241463559336 0.0 30 0.0 0.0 0.0 4.068259164774474 0.0 31 0.0 0.0 0.0 4.215122080135483 0.0 32 0.0 0.0 0.0 4.34947225353404 0.0 33 0.0 0.0 0.0 4.468289367944728 0.0 34 0.0 0.0 0.0 4.596329236129463 0.0 35 0.0 0.0 0.0 4.755327353824746 0.0 36 0.0 0.0 0.0 4.91664464352169 0.0 37 0.0 0.0 0.0 5.0767753801015045 0.0 38 0.0 0.0 0.0 5.213714396664707 0.0 39 5.3934232596771497E-5 0.0 0.0 5.365215656029038 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTATGCG 35 1.2124656E-7 45.0 1 GTACCGA 35 1.2124656E-7 45.0 20 CGTATAT 20 7.034407E-4 45.0 14 GTCGAAC 20 7.034407E-4 45.0 27 CGCCTAT 20 7.034407E-4 45.0 44 TATTACG 35 1.2124656E-7 45.0 1 GACGATT 20 7.034407E-4 45.0 24 TATACGT 20 7.034407E-4 45.0 11 GCTCGAT 20 7.034407E-4 45.0 43 TCGACTA 40 6.8193913E-9 45.0 35 TAATGCG 45 3.8562575E-10 45.0 1 TGCGTTA 35 1.2124656E-7 45.0 21 TAGTACG 40 6.8193913E-9 45.0 1 AGTCGAC 20 7.034407E-4 45.0 18 AAGTCGA 20 7.034407E-4 45.0 25 TACCCGA 30 2.1662254E-6 44.999996 40 CGGTCTA 65 0.0 44.999996 31 GCTACGC 30 2.1662254E-6 44.999996 41 TATAGCG 160 0.0 43.59375 1 CGTATTT 380 0.0 43.223682 1 >>END_MODULE