SRR1545313_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545313_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	3527795
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	5131	0.14544495924508086	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGTATTA	40	6.8212103E-9	45.000004	45
CGTTGAA	20	7.0352736E-4	45.000004	18
TGACGTA	40	6.8212103E-9	45.000004	18
CCCGTTA	20	7.0352736E-4	45.000004	32
TCGTAGA	20	7.0352736E-4	45.000004	29
TATACGA	20	7.0352736E-4	45.000004	43
TAAGCTT	40	6.8212103E-9	45.000004	1
CTATGCG	45	3.8562575E-10	45.0	1
TACCCGT	25	3.8924532E-5	45.0	44
TCCGCGT	25	3.8924532E-5	45.0	13
GTCGATA	25	3.8924532E-5	45.0	21
TAGACGT	35	1.212884E-7	45.0	37
TAGCGGA	35	1.212884E-7	45.0	44
CCGTGTA	25	3.8924532E-5	45.0	22
ACCGAGT	35	1.212884E-7	45.0	40
TCGGATT	90	0.0	45.0	24
CCGTAGA	25	3.8924532E-5	45.0	41
CTTATCG	50	2.1827873E-11	45.0	10
TACGATC	35	1.212884E-7	45.0	11
TATTCGA	35	1.212884E-7	45.0	44