##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545313_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3527795 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.312312932015608 31.0 31.0 33.0 30.0 34.0 2 31.625985920383695 31.0 31.0 34.0 30.0 34.0 3 31.720169397598216 31.0 31.0 34.0 30.0 34.0 4 30.29234776964081 35.0 33.0 37.0 0.0 37.0 5 32.8760713136676 35.0 33.0 37.0 19.0 37.0 6 34.517389474161625 35.0 33.0 37.0 30.0 37.0 7 35.522514488511945 36.0 35.0 37.0 33.0 37.0 8 35.71169328149737 37.0 35.0 37.0 35.0 37.0 9 37.756169221851046 39.0 37.0 39.0 35.0 39.0 10 37.218988631709045 39.0 37.0 39.0 34.0 39.0 11 36.73409339261493 39.0 35.0 39.0 32.0 39.0 12 35.34533299128776 35.0 35.0 39.0 31.0 39.0 13 34.820472278009355 35.0 34.0 39.0 30.0 39.0 14 35.5506303512534 36.0 34.0 40.0 29.0 41.0 15 35.958044330807205 36.0 34.0 40.0 31.0 41.0 16 36.20256732604928 36.0 35.0 40.0 32.0 41.0 17 36.1499463545926 36.0 35.0 40.0 31.0 41.0 18 36.146520135098555 36.0 35.0 40.0 31.0 41.0 19 36.122509953101016 36.0 35.0 40.0 31.0 41.0 20 36.00688957266508 36.0 34.0 40.0 31.0 41.0 21 35.82178783064209 35.0 34.0 40.0 31.0 41.0 22 35.67868342689981 35.0 34.0 40.0 30.0 41.0 23 35.665830639252 35.0 34.0 40.0 30.0 41.0 24 35.613647051486836 35.0 34.0 40.0 30.0 41.0 25 35.49334272541347 35.0 34.0 40.0 30.0 41.0 26 35.341344947764824 35.0 34.0 40.0 30.0 41.0 27 35.32644980788283 35.0 34.0 40.0 30.0 41.0 28 35.38553940917769 36.0 34.0 40.0 30.0 41.0 29 35.47677571967759 36.0 34.0 40.0 30.0 41.0 30 35.44974296975873 36.0 34.0 40.0 30.0 41.0 31 35.289640129315906 35.0 34.0 40.0 30.0 41.0 32 35.15987748721227 35.0 34.0 40.0 29.0 41.0 33 35.02473159579851 35.0 34.0 40.0 29.0 41.0 34 34.95578144421657 35.0 34.0 40.0 29.0 41.0 35 34.810074564990316 35.0 34.0 40.0 29.0 41.0 36 34.59266255550563 35.0 33.0 40.0 27.0 41.0 37 34.5318775609127 35.0 33.0 40.0 27.0 41.0 38 34.549040973185804 35.0 33.0 40.0 27.0 41.0 39 34.52128170712867 35.0 33.0 39.0 27.0 41.0 40 34.4094628514412 35.0 33.0 39.0 27.0 41.0 41 34.43759572197364 35.0 33.0 39.0 27.0 41.0 42 34.36763360682806 35.0 33.0 39.0 27.0 41.0 43 34.26738033247397 35.0 33.0 39.0 27.0 41.0 44 34.19424371314093 35.0 33.0 39.0 27.0 41.0 45 34.108346431694585 35.0 33.0 39.0 27.0 41.0 46 34.07524416809934 35.0 33.0 39.0 27.0 41.0 47 34.00656585770999 35.0 33.0 39.0 26.0 41.0 48 33.95304205601516 35.0 33.0 38.0 26.0 41.0 49 33.93441937527549 35.0 33.0 38.0 26.0 40.0 50 33.73978901835282 35.0 33.0 38.0 26.0 40.0 51 33.628166602651234 35.0 33.0 38.0 25.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 1.0 11 0.0 12 5.0 13 4.0 14 14.0 15 69.0 16 199.0 17 543.0 18 1450.0 19 2924.0 20 5317.0 21 8763.0 22 13422.0 23 19725.0 24 27941.0 25 38316.0 26 50175.0 27 62045.0 28 75619.0 29 91791.0 30 113671.0 31 144688.0 32 187816.0 33 282236.0 34 436549.0 35 605808.0 36 235352.0 37 288260.0 38 375438.0 39 459364.0 40 289.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.86086493121057 25.202173028761592 30.691154106176803 12.245807933851031 2 27.34373737703013 26.354025673260495 32.91855110628594 13.383685843423443 3 28.362844212886518 25.86941701544449 31.37736177980863 14.390376991860354 4 22.635187135306897 38.196153688068605 25.758101023443825 13.410558153180668 5 23.73927623345461 32.78586199028005 29.34161423778876 14.133247538476585 6 21.808750224998903 40.732837367250646 25.91729394706892 11.541118460681531 7 90.03357621403738 4.341635497527492 3.993599401325757 1.63118888710937 8 92.7896887432518 2.307560388287868 3.1001801408528555 1.8025707276074714 9 89.51710629444172 3.9138895542399714 4.472453756524968 2.0965503947933484 10 64.74293432583242 18.055640988209348 7.76314950273471 9.438275183223515 11 57.4463935687873 16.171092708051347 14.689090494203885 11.693423228957466 12 48.546046468119606 21.383555450359218 17.48715557451609 12.583242507005085 13 20.133029271825603 47.148544629152205 19.14935533385585 13.569070765166344 14 13.23571806184883 47.369844336193005 25.821596776456683 13.572840825501482 15 11.990917839613696 21.429079637563973 52.83648851478048 13.743514008041851 16 14.791250625390647 15.48233386577168 49.761621636177836 19.964793872659833 17 15.82107236956796 16.55507193586929 26.180574551525808 41.44328114303694 18 23.13833428529719 22.276152667601153 33.146398812856184 21.439114234245473 19 33.87705351359702 22.94339665428405 21.361331936804717 21.818217895314213 20 35.50537942255715 23.753874587383905 21.054738157971197 19.68600783208775 21 23.883615686285626 29.155889160226145 24.764335796155954 22.19615935733227 22 23.75523521066275 25.36887772673866 22.469843060608678 28.406044001989912 23 20.635581149131397 31.98499345908705 22.576056715313673 24.80336867646788 24 20.80738818440414 22.838118428083266 38.81764671700028 17.53684667051232 25 17.021765720513805 25.288856070151468 35.772628511577345 21.916749697757382 26 16.959035318095296 38.21321817169082 24.020981944812554 20.806764565401334 27 18.254150255329463 35.55739491665474 27.358279038322802 18.830175789692998 28 14.748419338425279 27.947145454880456 40.149385097490075 17.155050109204193 29 14.861436109524503 24.96942140912383 38.18345453746604 21.98568794388563 30 19.838624409865087 30.43875848795069 29.87211558494754 19.850501517236687 31 33.3007728623687 25.29826704783016 22.138332867981276 19.262627221819862 32 35.69552652577602 24.75761771871665 22.463096636851066 17.08375911865627 33 30.893178316767273 26.1963634508241 22.165488640921595 20.744969591487035 34 19.503372503220852 26.451622047199454 27.133776197313054 26.911229252266644 35 21.322185671219557 24.50791500072992 31.202266571612014 22.967632756438512 36 34.429041370034255 23.13549965346626 24.148682108796006 18.28677686770348 37 21.648650219187907 32.90775115901009 26.94790938815889 18.495689233643112 38 20.38412095940949 35.07505396430348 21.6188015460082 22.922023530278828 39 22.055930120656104 32.869058434517875 24.702427436968417 20.3725840078576 40 25.58136172878526 24.99538663669516 22.82641139862152 26.59684023589806 41 17.387574958295478 22.423496830172954 25.94702923497539 34.24189897655618 42 23.040397755538518 24.35002600774705 21.82726037085488 30.782315865859555 43 23.134139030187413 25.126119856737706 24.345632328409106 27.39410878466578 44 19.895203661210473 31.28761733604135 27.164276835813872 21.652902166934304 45 17.2159663472509 38.66636241618348 20.68867380332474 23.428997433240877 46 23.210022124301442 32.456251000979364 23.94070517136058 20.393021703358613 47 21.537816114598495 25.03949350798445 27.14783597119447 26.274854406222587 48 24.044707813237448 20.494586561860878 32.16859256277647 23.292113062125207 49 21.419923776750068 21.563724649533206 32.80802881119793 24.208322762518797 50 19.247943828935636 33.53154023972482 25.085272812053987 22.13524311928556 51 17.670471215022417 34.708932917020405 23.102277768407745 24.518318099549436 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 660.0 1 1060.5 2 1461.0 3 4096.5 4 6732.0 5 5253.5 6 3775.0 7 4317.0 8 4859.0 9 5515.5 10 6172.0 11 6326.5 12 6481.0 13 6578.5 14 6676.0 15 6369.0 16 6062.0 17 5842.0 18 5622.0 19 5328.5 20 5035.0 21 5551.5 22 6068.0 23 7731.0 24 9394.0 25 11410.0 26 14205.5 27 14985.0 28 20107.0 29 25229.0 30 29458.5 31 33688.0 32 40793.5 33 47899.0 34 56162.0 35 64425.0 36 69715.5 37 75006.0 38 105626.5 39 136247.0 40 216853.5 41 297460.0 42 356886.0 43 416312.0 44 403655.0 45 390998.0 46 356908.0 47 322818.0 48 307822.5 49 292827.0 50 273583.5 51 254340.0 52 236913.0 53 219486.0 54 196563.5 55 173641.0 56 167045.0 57 160449.0 58 151757.0 59 143065.0 60 133767.0 61 124469.0 62 106924.0 63 89379.0 64 73439.0 65 57499.0 66 48764.5 67 40030.0 68 32182.0 69 24334.0 70 21125.0 71 17916.0 72 15260.0 73 12604.0 74 8697.0 75 3963.5 76 3137.0 77 2265.0 78 1393.0 79 987.5 80 582.0 81 406.0 82 230.0 83 151.5 84 73.0 85 55.0 86 37.0 87 27.5 88 18.0 89 11.0 90 4.0 91 2.5 92 1.0 93 0.5 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3527795.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 13.365680612437652 #Duplication Level Percentage of deduplicated Percentage of total 1 77.31513858966149 10.333694488957688 2 10.19011610843254 2.7239567461793084 3 3.7435342090352766 1.5010464779909976 4 1.7812121410339035 0.9522845032022162 5 1.038020544390387 0.6936925532735287 6 0.6338515032098616 0.5083114048569904 7 0.4329071294832637 0.40502688992643454 8 0.3000986902382136 0.32088185967478594 9 0.2183666623147412 0.2626757158412571 >10 1.665155793933645 4.9566314753421565 >50 0.6295322512649904 6.166265798969957 >100 1.963461273007499 62.845822170138845 >500 0.08095073637175151 6.824481095524304 >1k 0.00742241708852736 1.346158750794325 >5k 2.3195053401648E-4 0.15907006932720005 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 5131 0.14544495924508086 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.07287838437324164 0.0 2 0.0 0.0 0.0 0.24817201679802822 0.0 3 0.0 0.0 0.0 0.3539604767283813 0.0 4 0.0 0.0 0.0 0.581751490662014 0.0 5 0.0 0.0 0.0 0.9276899593088601 0.0 6 0.0 0.0 0.0 1.2974676816538375 0.0 7 0.0 0.0 0.0 1.4777786124193724 0.0 8 0.0 0.0 0.0 1.906204867346317 0.0 9 0.0 0.0 0.0 2.028264113986215 0.0 10 2.834631830931219E-5 0.0 0.0 2.235192237644194 0.0 11 2.834631830931219E-5 0.0 0.0 2.553804855440863 0.0 12 2.834631830931219E-5 0.0 0.0 2.8080146380387747 0.0 13 5.669263661862438E-5 0.0 0.0 2.910798388228341 0.0 14 5.669263661862438E-5 0.0 0.0 2.954083216286661 0.0 15 5.669263661862438E-5 0.0 0.0 3.021660839136061 0.0 16 5.669263661862438E-5 0.0 0.0 3.1745041874598723 0.0 17 5.669263661862438E-5 0.0 0.0 3.355722200411305 0.0 18 5.669263661862438E-5 0.0 0.0 3.5766534053140844 0.0 19 5.669263661862438E-5 0.0 0.0 3.704920495663722 0.0 20 5.669263661862438E-5 0.0 0.0 3.8454615418412916 0.0 21 5.669263661862438E-5 0.0 0.0 4.007630828888867 0.0 22 5.669263661862438E-5 0.0 0.0 4.16741902519846 0.0 23 5.669263661862438E-5 0.0 0.0 4.3393394457444385 0.0 24 5.669263661862438E-5 0.0 0.0 4.4663026054518475 0.0 25 5.669263661862438E-5 0.0 0.0 4.580198112418664 0.0 26 5.669263661862438E-5 0.0 0.0 4.688027507267288 0.0 27 5.669263661862438E-5 0.0 0.0 4.789195517313223 0.0 28 5.669263661862438E-5 0.0 0.0 4.908051629984168 0.0 29 5.669263661862438E-5 0.0 0.0 5.025490426739649 0.0 30 5.669263661862438E-5 0.0 0.0 5.178673930883172 0.0 31 5.669263661862438E-5 0.0 0.0 5.332055859254861 0.0 32 5.669263661862438E-5 0.0 0.0 5.450458430832858 0.0 33 5.669263661862438E-5 0.0 0.0 5.581531806695117 0.0 34 5.669263661862438E-5 0.0 0.0 5.724992523658546 0.0 35 5.669263661862438E-5 0.0 0.0 5.905275108105771 0.0 36 5.669263661862438E-5 0.0 0.0 6.056871218423973 0.0 37 5.669263661862438E-5 0.0 0.0 6.198007537286038 0.0 38 8.503895492793658E-5 0.0 0.0 6.342743838573386 0.0 39 1.1338527323724876E-4 0.0 0.0 6.490088001145192 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTATTA 40 6.8212103E-9 45.000004 45 CGTTGAA 20 7.0352736E-4 45.000004 18 TGACGTA 40 6.8212103E-9 45.000004 18 CCCGTTA 20 7.0352736E-4 45.000004 32 TCGTAGA 20 7.0352736E-4 45.000004 29 TATACGA 20 7.0352736E-4 45.000004 43 TAAGCTT 40 6.8212103E-9 45.000004 1 CTATGCG 45 3.8562575E-10 45.0 1 TACCCGT 25 3.8924532E-5 45.0 44 TCCGCGT 25 3.8924532E-5 45.0 13 GTCGATA 25 3.8924532E-5 45.0 21 TAGACGT 35 1.212884E-7 45.0 37 TAGCGGA 35 1.212884E-7 45.0 44 CCGTGTA 25 3.8924532E-5 45.0 22 ACCGAGT 35 1.212884E-7 45.0 40 TCGGATT 90 0.0 45.0 24 CCGTAGA 25 3.8924532E-5 45.0 41 CTTATCG 50 2.1827873E-11 45.0 10 TACGATC 35 1.212884E-7 45.0 11 TATTCGA 35 1.212884E-7 45.0 44 >>END_MODULE