##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545312_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2978412 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.373828066768464 31.0 31.0 33.0 30.0 34.0 2 31.693109952551897 31.0 31.0 34.0 30.0 34.0 3 31.7835376704096 31.0 31.0 34.0 30.0 34.0 4 30.311467318826274 35.0 33.0 37.0 0.0 37.0 5 32.93810795820055 35.0 33.0 37.0 19.0 37.0 6 34.60364314943668 36.0 33.0 37.0 31.0 37.0 7 35.5335923975595 37.0 35.0 37.0 33.0 37.0 8 35.716546602686265 37.0 35.0 37.0 35.0 37.0 9 37.74010915884035 39.0 37.0 39.0 35.0 39.0 10 37.238233998520016 39.0 37.0 39.0 34.0 39.0 11 36.8230560446305 39.0 35.0 39.0 33.0 39.0 12 35.786488571762405 37.0 35.0 39.0 32.0 39.0 13 35.37278422192766 37.0 35.0 39.0 30.0 39.0 14 36.24847771228426 38.0 35.0 40.0 31.0 41.0 15 36.54757434498652 38.0 35.0 40.0 31.0 41.0 16 36.7216133966691 38.0 35.0 40.0 32.0 41.0 17 36.688651872205725 38.0 35.0 40.0 32.0 41.0 18 36.67220888177996 38.0 35.0 40.0 32.0 41.0 19 36.640626280044536 38.0 35.0 40.0 31.0 41.0 20 36.53288833109724 38.0 35.0 40.0 31.0 41.0 21 36.36821836602861 38.0 35.0 40.0 31.0 41.0 22 36.22231947762768 37.0 35.0 40.0 31.0 41.0 23 36.19193046495918 37.0 35.0 40.0 31.0 41.0 24 36.13405096407079 37.0 35.0 40.0 31.0 41.0 25 36.01075270983329 37.0 34.0 40.0 31.0 41.0 26 35.82747652104544 37.0 34.0 40.0 30.0 41.0 27 35.84136815188765 37.0 34.0 40.0 30.0 41.0 28 35.87199252487567 37.0 34.0 40.0 30.0 41.0 29 35.931428559917165 36.0 35.0 40.0 30.0 41.0 30 35.9002330772237 36.0 35.0 40.0 30.0 41.0 31 35.79509785751602 36.0 34.0 40.0 30.0 41.0 32 35.6949189702432 36.0 34.0 40.0 30.0 41.0 33 35.54291716525451 36.0 34.0 40.0 30.0 41.0 34 35.46852450231869 36.0 34.0 40.0 30.0 41.0 35 35.33295695827172 36.0 34.0 40.0 29.0 41.0 36 35.15729355106009 36.0 34.0 40.0 28.0 41.0 37 35.11753713052459 36.0 34.0 40.0 28.0 41.0 38 35.11600208433219 35.0 34.0 40.0 29.0 41.0 39 35.05157748491478 36.0 34.0 40.0 28.0 41.0 40 34.875283204607015 35.0 34.0 40.0 27.0 41.0 41 34.82533611871024 35.0 34.0 40.0 27.0 41.0 42 34.7912129013716 35.0 33.0 40.0 27.0 41.0 43 34.74889907776359 35.0 33.0 40.0 27.0 41.0 44 34.67274070880725 35.0 34.0 40.0 27.0 41.0 45 34.57415125912735 35.0 33.0 40.0 27.0 41.0 46 34.49840082567489 35.0 33.0 39.0 27.0 41.0 47 34.43948822392604 35.0 33.0 39.0 27.0 41.0 48 34.34239621650732 35.0 33.0 39.0 27.0 41.0 49 34.302451440566315 35.0 33.0 39.0 27.0 41.0 50 34.1524594314017 35.0 33.0 39.0 26.0 41.0 51 34.0504137775432 35.0 33.0 39.0 26.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 1.0 11 1.0 12 4.0 13 6.0 14 15.0 15 58.0 16 160.0 17 392.0 18 967.0 19 2026.0 20 3440.0 21 6024.0 22 9288.0 23 13571.0 24 19830.0 25 27741.0 26 36484.0 27 45645.0 28 55959.0 29 69643.0 30 87142.0 31 110937.0 32 144794.0 33 215588.0 34 329033.0 35 449504.0 36 230517.0 37 293890.0 38 375298.0 39 450153.0 40 300.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.335049684194125 25.108749226097665 30.316390076322552 12.239811013385657 2 28.263886930350807 27.381604694045013 30.464589855265157 13.889918520339025 3 29.666379265192322 25.58997882092874 30.793254929136733 13.950386984742206 4 23.414759274405288 39.00467766044456 25.13241955780463 12.448143507345526 5 24.08155755483123 33.08078264524854 28.02973530861412 14.807924491306105 6 23.134341387289602 40.789857145351284 24.975557444705434 11.100244022653683 7 90.07602037595873 4.208820002068216 3.870988969961174 1.8441706520118772 8 91.65760143324698 3.000592261916753 3.5990991172477145 1.742707187588554 9 87.56501786858232 4.828512643650375 4.993902791151795 2.612566696615512 10 57.89884005302154 22.46942330342478 9.363916073397501 10.267820570156177 11 50.95540845255794 20.875755268243616 14.99960381572462 13.169232463473824 12 46.92144673067393 20.532854420409265 18.469875893596992 14.075822955319813 13 23.164928156346402 39.63578578114781 19.7398815207567 17.459404541749095 14 15.497688029728593 43.307473915630204 23.774649041166903 17.420189013474292 15 15.39602311567372 23.479055281807888 45.581336631735304 15.543584970783089 16 16.89611779700055 18.27551057409116 45.8962024058458 18.93216922306249 17 17.63077102831979 19.001434321376625 25.973740369028864 37.39405428127472 18 23.146294065428155 25.430632162373772 29.271873736742936 22.151200035455133 19 33.855222178798634 25.07547646195355 20.695357123191823 20.373944236055994 20 37.95049173855061 23.265955146568036 20.69743876938449 18.086114345496863 21 26.913704349834745 27.54226077520504 23.478249483281697 22.06578539167852 22 24.467333599246846 26.119556327331477 21.586469568347162 27.82664050507452 23 24.781057825445238 30.068741329272108 21.57132727104242 23.578873574240234 24 23.426241903403557 23.11070463052123 33.59622510250429 19.866828363570924 25 21.270126496938637 24.68741732171372 31.7116973743055 22.33075880704214 26 20.282351803578553 36.8385233473408 22.796543930121153 20.0825809189595 27 22.551043979140562 34.03491525014001 25.512790037107024 17.901250733612407 28 18.596285537393754 30.150865629066764 34.14567897255316 17.107169860986325 29 19.52993742974444 25.778938575321348 33.574602842051405 21.11652115288281 30 22.087609101762954 29.652076341352373 26.777692273600834 21.482622283283845 31 31.47244236190292 26.62009151185262 20.83996438370514 21.067501742539314 32 34.623248899077765 26.475014202199027 21.80420304511263 17.09753385361058 33 30.78150370062973 28.17081720057534 21.18770002269666 19.85997907609827 34 22.650157197862487 27.62811189318335 24.870770061361558 24.85096084759261 35 23.697090933020686 23.76712825492242 27.893018158669786 24.642762653387106 36 31.71636429076971 25.76691874730561 22.913854765559634 19.60286219636504 37 24.512693341283878 31.93634728842081 25.331787543160583 18.21917182713473 38 23.267835343129157 31.520723123597406 21.020530403449893 24.190911129823544 39 24.473108488684574 30.611446636664102 23.8189679601076 21.096476914543725 40 27.25123320749446 24.531327432202126 24.77038099497316 23.44705836533025 41 18.414544394798302 24.87852587217618 26.74472168390404 29.96220804912148 42 24.12141100693927 25.55267706415365 22.79771905297185 27.528192875935233 43 24.506817727030377 26.557742850888328 23.544660711815556 25.39077871026574 44 22.424567185466618 30.240980764246185 26.09185700299354 21.24259504729366 45 20.0406122457202 34.502916319166054 20.348125108279177 25.108346326834567 46 22.398311583488116 33.06379372632127 22.89082235768591 21.647072332504706 47 23.863051854478158 26.348638133340852 25.35673372253402 24.431576289646966 48 25.582693059254396 21.25434627580066 29.672892803279062 23.49006786166588 49 21.710629691258294 24.09223438530331 29.982117987706204 24.215017935732195 50 20.12817568556667 32.81648072865675 23.80634378319722 23.248999802579362 51 19.021444984777123 34.25117142960746 21.76263727113643 24.96474631447899 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 489.0 1 1092.0 2 1695.0 3 4802.0 4 7909.0 5 5885.5 6 3862.0 7 4129.5 8 4397.0 9 4741.5 10 5086.0 11 5163.0 12 5240.0 13 5100.0 14 4960.0 15 4788.0 16 4616.0 17 4493.0 18 4370.0 19 4462.5 20 4555.0 21 5169.0 22 5783.0 23 5857.0 24 5931.0 25 8423.0 26 15527.0 27 20139.0 28 26145.0 29 32151.0 30 36310.5 31 40470.0 32 44652.5 33 48835.0 34 51101.0 35 53367.0 36 57203.0 37 61039.0 38 83075.5 39 105112.0 40 153203.0 41 201294.0 42 246131.5 43 290969.0 44 289191.0 45 287413.0 46 263009.5 47 238606.0 48 229121.0 49 219636.0 50 204277.0 51 188918.0 52 180959.0 53 173000.0 54 159423.0 55 145846.0 56 147587.0 57 149328.0 58 158631.5 59 167935.0 60 163006.0 61 158077.0 62 134867.0 63 111657.0 64 94032.0 65 76407.0 66 61349.5 67 46292.0 68 41241.5 69 36191.0 70 29723.0 71 23255.0 72 18604.5 73 13954.0 74 11906.5 75 7487.5 76 5116.0 77 3656.5 78 2197.0 79 1469.0 80 741.0 81 694.5 82 648.0 83 371.0 84 94.0 85 68.0 86 42.0 87 27.0 88 12.0 89 8.0 90 4.0 91 2.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2978412.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 14.561233715480332 #Duplication Level Percentage of deduplicated Percentage of total 1 77.75332198984395 11.32184293649114 2 9.3741727824029 2.729990415477263 3 3.143220090310021 1.3730748706259224 4 1.5255576347336393 0.8885600506316758 5 0.8747762497462364 0.636891071065317 6 0.5569972660348991 0.48663404217706446 7 0.37953259584484333 0.38685239815177924 8 0.2744988742249105 0.31976338097801293 9 0.219274891732676 0.28736216518105273 >10 2.432060515886621 8.68959893399128 >50 1.2816069966580383 13.680327833725189 >100 2.1632967189077945 56.46650862733126 >500 0.01840567137399171 1.7487054983492734 >1k 0.003277722299477976 0.9838877758237741 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 3946 0.13248670768181164 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3708 0.12449587229704957 No Hit AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 3309 0.11109947179906608 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0497580589925101 0.0 2 0.0 0.0 0.0 0.17865224824503795 0.0 3 0.0 0.0 0.0 0.25862775196984167 0.0 4 0.0 0.0 0.0 0.397157948598112 0.0 5 0.0 0.0 0.0 0.6735804180214154 0.0 6 0.0 0.0 0.0 0.9268361798166271 0.0 7 0.0 0.0 0.0 1.0763453813642976 0.0 8 0.0 0.0 0.0 1.3859063151773496 0.0 9 0.0 0.0 0.0 1.484515909820401 0.0 10 0.0 0.0 0.0 1.6495031580587238 0.0 11 0.0 0.0 0.0 1.9165246446764248 0.0 12 0.0 0.0 0.0 2.12243974305771 0.0 13 0.0 0.0 0.0 2.2185312173064036 0.0 14 0.0 0.0 0.0 2.2579146202741596 0.0 15 0.0 0.0 0.0 2.322412077308311 0.0 16 0.0 0.0 0.0 2.466381413988394 0.0 17 0.0 0.0 0.0 2.62233700374562 0.0 18 0.0 0.0 0.0 2.8024665492886816 0.0 19 0.0 0.0 0.0 2.909234854009452 0.0 20 3.357493859143731E-5 0.0 0.0 3.02738506291272 0.0 21 3.357493859143731E-5 0.0 0.0 3.183307077731355 0.0 22 3.357493859143731E-5 0.0 0.0 3.3456419058209543 0.0 23 3.357493859143731E-5 0.0 0.0 3.5191571884615023 0.0 24 3.357493859143731E-5 0.0 0.0 3.6492936504419133 0.0 25 3.357493859143731E-5 0.0 0.0 3.75643127948719 0.0 26 3.357493859143731E-5 0.0 0.0 3.8605807389978284 0.0 27 3.357493859143731E-5 0.0 0.0 3.961574154280872 0.0 28 3.357493859143731E-5 0.0 0.0 4.075561070798802 0.0 29 6.714987718287463E-5 0.0 0.0 4.1902194860885595 0.0 30 1.0072481577431195E-4 0.0 0.0 4.333685198689771 0.0 31 1.3429975436574925E-4 0.0 0.0 4.485746095570391 0.0 32 1.3429975436574925E-4 0.0 0.0 4.623235469102327 0.0 33 1.3429975436574925E-4 0.0 0.0 4.751055260319929 0.0 34 1.6787469295718657E-4 0.0 0.0 4.897475567517187 0.0 35 1.6787469295718657E-4 0.0 0.0 5.069211378412389 0.0 36 1.6787469295718657E-4 0.0 0.0 5.234769400606766 0.0 37 1.6787469295718657E-4 0.0 0.0 5.39975664884509 0.0 38 1.6787469295718657E-4 0.0 0.0 5.54926585039276 0.0 39 1.6787469295718657E-4 0.0 0.0 5.701729646536476 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACTACGG 105 0.0 45.000004 2 CGGTATG 20 7.035096E-4 45.000004 24 CACGATA 35 1.212793E-7 45.0 13 AACGCAC 35 1.212793E-7 45.0 40 TTACGAG 55 1.8189894E-12 45.0 1 TAAATCG 35 1.212793E-7 45.0 1 CGCGTAA 35 1.212793E-7 45.0 31 TCGTAAG 155 0.0 43.548386 1 GTCGATG 105 0.0 42.857147 1 GTTTACG 150 0.0 42.0 1 TTAAACG 60 3.6379788E-12 41.249996 1 TATCGTG 60 3.6379788E-12 41.249996 1 CGTAACG 55 6.184564E-11 40.909092 41 TCGGTAC 150 0.0 40.5 36 TCTCAAC 670 0.0 40.298508 35 CGGGTAT 330 0.0 40.227272 6 TTAGTAG 500 0.0 40.05 1 ACGCATT 45 1.9301297E-8 40.0 9 CTATACG 45 1.9301297E-8 40.0 1 TATCGTT 45 1.9301297E-8 40.0 23 >>END_MODULE