SRR1545308_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545308_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	4264263
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4608	0.10806087710818962	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTATACG	80	0.0	45.0	1
TCGTAAT	35	1.2129567E-7	45.0	13
CAATACG	20	7.035442E-4	45.0	1
CTTACGT	25	3.892591E-5	45.0	22
GCGATAT	835	0.0	42.574852	9
ACGGGTC	250	0.0	42.300003	5
CGTTACA	60	3.6379788E-12	41.250004	35
CGGTCTA	230	0.0	41.086956	31
TGTACGA	55	6.184564E-11	40.909092	34
GACCGTT	105	0.0	40.714287	9
GCACCGA	1855	0.0	40.26954	9
ACCGTTG	95	0.0	40.263157	10
CGTATTT	680	0.0	40.036766	1
ACGATTG	90	0.0	40.000004	1
CGGAATA	40	3.461173E-7	39.375	39
CTATCGT	40	3.461173E-7	39.375	41
CATTCTA	1400	0.0	39.375	45
TCGCTAA	40	3.461173E-7	39.375	15
GCTCGAC	40	3.461173E-7	39.375	20
TATAGCG	390	0.0	39.23077	1