##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545308_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 4264263 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.24147478708513 31.0 31.0 33.0 30.0 34.0 2 31.559378490491792 31.0 31.0 34.0 30.0 34.0 3 31.669568692174945 31.0 31.0 34.0 30.0 34.0 4 30.29776681222523 35.0 33.0 37.0 0.0 37.0 5 32.85608673761445 35.0 33.0 37.0 19.0 37.0 6 34.474724002717466 35.0 33.0 37.0 30.0 37.0 7 35.476117209468555 36.0 35.0 37.0 33.0 37.0 8 35.64711182213667 37.0 35.0 37.0 35.0 37.0 9 37.64016103134352 39.0 37.0 39.0 35.0 39.0 10 37.083379472607575 39.0 37.0 39.0 33.0 39.0 11 36.68068386025909 39.0 35.0 39.0 32.0 39.0 12 35.681896027519876 37.0 35.0 39.0 31.0 39.0 13 35.253218199721736 37.0 35.0 39.0 30.0 39.0 14 36.10346571025286 38.0 35.0 40.0 30.0 41.0 15 36.39925656555423 38.0 35.0 40.0 31.0 41.0 16 36.583295636315114 38.0 35.0 40.0 32.0 41.0 17 36.52112287633291 38.0 35.0 40.0 31.0 41.0 18 36.514917114633874 38.0 35.0 40.0 31.0 41.0 19 36.498591667540204 38.0 35.0 40.0 31.0 41.0 20 36.40252817427068 38.0 35.0 40.0 31.0 41.0 21 36.24354313981103 37.0 35.0 40.0 31.0 41.0 22 36.11293979756877 37.0 34.0 40.0 30.0 41.0 23 36.05798258690892 37.0 34.0 40.0 30.0 41.0 24 35.961564518886384 37.0 34.0 40.0 30.0 41.0 25 35.84319564717279 37.0 34.0 40.0 30.0 41.0 26 35.64951669256798 37.0 34.0 40.0 30.0 41.0 27 35.66648586168348 37.0 34.0 40.0 30.0 41.0 28 35.68660235074619 37.0 34.0 40.0 30.0 41.0 29 35.727884748196814 36.0 34.0 40.0 30.0 41.0 30 35.67727975502449 36.0 34.0 40.0 30.0 41.0 31 35.58941509939701 36.0 34.0 40.0 30.0 41.0 32 35.4889921189195 36.0 34.0 40.0 29.0 41.0 33 35.36178866078382 36.0 34.0 40.0 29.0 41.0 34 35.28660099060494 36.0 34.0 40.0 29.0 41.0 35 35.16780484693369 36.0 34.0 40.0 28.0 41.0 36 35.00365877995799 36.0 34.0 40.0 27.0 41.0 37 34.962614876240046 36.0 33.0 40.0 27.0 41.0 38 34.93827679015108 36.0 33.0 40.0 27.0 41.0 39 34.88318684846596 36.0 34.0 40.0 27.0 41.0 40 34.7381725751906 36.0 33.0 40.0 27.0 41.0 41 34.68715297344465 35.0 33.0 40.0 26.0 41.0 42 34.646215301448336 35.0 33.0 40.0 27.0 41.0 43 34.57087613967525 35.0 33.0 40.0 27.0 41.0 44 34.50307755408144 35.0 33.0 40.0 27.0 41.0 45 34.407763545541165 35.0 33.0 40.0 26.0 41.0 46 34.334419570275095 35.0 33.0 39.0 26.0 41.0 47 34.27160426080661 35.0 33.0 39.0 26.0 41.0 48 34.174886023681 35.0 33.0 39.0 26.0 41.0 49 34.137400765384314 35.0 33.0 39.0 26.0 41.0 50 33.98493713919615 35.0 33.0 39.0 26.0 41.0 51 33.89761489851822 35.0 33.0 39.0 25.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 1.0 10 1.0 11 0.0 12 8.0 13 13.0 14 32.0 15 91.0 16 278.0 17 794.0 18 1916.0 19 3683.0 20 6575.0 21 10791.0 22 16476.0 23 24206.0 24 33909.0 25 45861.0 26 59750.0 27 73964.0 28 88953.0 29 107637.0 30 133248.0 31 167738.0 32 211965.0 33 303251.0 34 451824.0 35 605825.0 36 328167.0 37 408047.0 38 528911.0 39 649917.0 40 430.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.43080926293711 25.572648778933193 30.093711386938377 11.902830571191316 2 28.352894744062457 26.017930882780917 32.02459604391193 13.604578329244701 3 29.54226791358788 26.11262485451765 30.02284333775848 14.322263894135986 4 22.572388241532007 39.25252734177043 25.41414542208114 12.760938994616419 5 24.182725127413576 33.16854518588558 28.245420134733717 14.403309551967128 6 22.368460857128184 41.52403357860432 25.15027801990637 10.957227544361125 7 89.11221001143691 4.541417825307679 4.269952392711238 2.076419770544171 8 91.10301123547023 3.1434505798540098 3.6091817038489418 2.144356480826816 9 86.9439807066309 5.04302853740494 5.015286346081375 2.9977044098827865 10 56.306845989564906 23.41539440695848 9.836353902186614 10.44140570129 11 49.63136654563755 20.16369534430686 16.636004861801442 13.568933248254153 12 45.837604294106626 20.857039070995388 19.233757392543566 14.071599242354424 13 23.368422632468963 39.39839076529754 19.969851765709574 17.26333483652392 14 15.8998401365019 41.41688727923207 24.42984872180726 18.253423862458764 15 15.724757126847008 24.05079142632619 43.99252578933335 16.231925657493452 16 17.564910982272906 18.779704722715273 43.700376829477925 19.955007465533903 17 17.488766523077963 20.31260736028711 26.882300646090545 35.316325470544385 18 23.010916540560466 25.032227139836355 29.440421474941857 22.51643484466132 19 31.88947304610433 26.31648188678794 21.108477596245823 20.685567470861905 20 36.12474183698332 22.797632322396623 21.790189770190064 19.28743607042999 21 25.39046020379137 28.712511399976968 23.017623443957373 22.879404952274285 22 24.384002581454286 26.535253571367434 22.173726151506134 26.90701769567215 23 24.768054878416272 30.15686415214071 21.606406546688138 23.46867442275488 24 23.596246291563162 23.06285986581972 33.83606967956714 19.50482416304998 25 20.866677313289543 25.57063201777189 30.316540044551658 23.24615062438691 26 19.642034274152415 36.60841275502942 23.426392790500962 20.32316018031721 27 21.307761739836405 33.77610621108501 25.35003117772051 19.566100871358074 28 18.099188535041108 30.0911318087088 34.25288262004478 17.556797036205317 29 18.239259632907256 25.46505691604856 34.04651636167844 22.249167089365734 30 21.0536263828005 30.2090888859341 27.064348516965296 21.672936214300105 31 30.60306083372437 27.605684733798082 20.664133520845223 21.12712091163233 32 32.61918882582992 26.938699606473616 21.8355434456083 18.606568122088156 33 29.131692862283586 28.143878555333007 21.817322243023003 20.9071063393604 34 21.090420548638768 27.41317784573794 25.966222064633442 25.53017954098985 35 22.563570774129083 24.51349740857916 28.07007916725587 24.852852650035892 36 29.625775896092716 25.71049205923743 23.503991193788938 21.159740850880915 37 22.908296228445572 31.690306156069642 26.39698817826199 19.004409437222797 38 21.661797126490555 31.985832018334705 22.563172112039055 23.789198743135685 39 24.195857525673254 30.107430052977502 24.09703622876919 21.599676192580052 40 25.72015375224277 25.47675882092638 24.638348994890794 24.164738431940055 41 18.172472007472333 24.564479254680116 26.70712383359094 30.55592490425661 42 23.709184916596374 26.09545893393536 22.029527728472658 28.16582842099561 43 23.521204015793586 27.697611521615812 23.47254379009925 25.308640672491357 44 21.766715608300895 30.541995181816883 25.604025830489345 22.087263379392873 45 19.737549020780378 34.45737282151688 20.864027382926427 24.941050774776322 46 21.618342958677736 33.06754297284197 22.883508826730434 22.430605241749866 47 23.72850830260704 26.01213855711995 25.88960859121494 24.369744549058066 48 24.43303801852747 21.7708663841794 29.62554138898093 24.170554208312197 49 20.763283127705773 24.941918451089904 29.739441493172443 24.555356928031877 50 19.273600150834973 32.09595655802656 25.483559527167998 23.146883763970468 51 18.60079924713837 32.86251340501278 23.0677845151671 25.468902832681756 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 641.0 1 1382.0 2 2123.0 3 5916.0 4 9709.0 5 7343.0 6 4977.0 7 5356.0 8 5735.0 9 6131.0 10 6527.0 11 6529.5 12 6532.0 13 6584.5 14 6637.0 15 6869.0 16 7101.0 17 7240.0 18 7379.0 19 7291.0 20 7203.0 21 8103.5 22 9004.0 23 9377.5 24 9751.0 25 13933.5 26 24117.5 27 30119.0 28 39499.0 29 48879.0 30 54719.0 31 60559.0 32 65590.0 33 70621.0 34 82583.5 35 94546.0 36 98164.0 37 101782.0 38 135970.0 39 170158.0 40 239251.5 41 308345.0 42 359147.0 43 409949.0 44 406844.5 45 403740.0 46 376084.5 47 348429.0 48 329962.0 49 311495.0 50 292202.0 51 272909.0 52 255741.0 53 238573.0 54 226342.0 55 214111.0 56 211225.0 57 208339.0 58 212804.5 59 217270.0 60 212470.5 61 207671.0 62 180117.0 63 152563.0 64 125454.5 65 98346.0 66 83731.5 67 69117.0 68 57992.0 69 46867.0 70 38842.5 71 30818.0 72 26937.0 73 23056.0 74 17504.5 75 9587.0 76 7221.0 77 5348.5 78 3476.0 79 2341.5 80 1207.0 81 834.0 82 461.0 83 308.0 84 155.0 85 97.0 86 39.0 87 36.5 88 34.0 89 20.0 90 6.0 91 5.5 92 5.0 93 3.0 94 1.0 95 3.5 96 6.0 97 4.0 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 4264263.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 14.405803408998649 #Duplication Level Percentage of deduplicated Percentage of total 1 77.37279375281851 11.14617256008102 2 9.595164183978891 2.7645209782292968 3 3.4139644761392076 1.4754270326569947 4 1.7795726541329322 1.0254469522987588 5 1.0775869588332154 0.776175294252601 6 0.7018934445870986 0.6066803386071978 7 0.49875269477255935 0.5029453289421257 8 0.3639713599938693 0.41946398868620455 9 0.27965834830666103 0.3625832868651926 >10 2.094581749094002 6.684565186339175 >50 0.8090136608566356 8.581615958023866 >100 1.975557526565249 61.34406924951106 >500 0.03286966888824595 3.0136477832201307 >1k 0.004619521032942674 1.2966860622863128 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4608 0.10806087710818962 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.3450711177992538E-5 0.0 0.0 0.05656311536131801 0.0 2 2.3450711177992538E-5 0.0 0.0 0.19527407197914387 0.0 3 2.3450711177992538E-5 0.0 0.0 0.2778440260368556 0.0 4 2.3450711177992538E-5 0.0 0.0 0.4600091504675016 0.0 5 2.3450711177992538E-5 0.0 0.0 0.795119813201015 0.0 6 2.3450711177992538E-5 0.0 0.0 1.096719409661177 0.0 7 2.3450711177992538E-5 0.0 0.0 1.2675343898816747 0.0 8 2.3450711177992538E-5 0.0 0.0 1.6919453607809838 0.0 9 4.6901422355985076E-5 0.0 0.0 1.8190013139433474 0.0 10 4.6901422355985076E-5 0.0 0.0 2.0479506071740885 0.0 11 4.6901422355985076E-5 0.0 0.0 2.369905420936748 0.0 12 4.6901422355985076E-5 0.0 0.0 2.6414881070890797 0.0 13 7.035213353397762E-5 0.0 0.0 2.74732116663536 0.0 14 7.035213353397762E-5 0.0 0.0 2.7866714599920313 0.0 15 9.380284471197015E-5 0.0 0.0 2.8524741555574784 0.0 16 9.380284471197015E-5 0.0 0.0 3.0065453279968897 0.0 17 9.380284471197015E-5 0.0 0.0 3.1828477746330375 0.0 18 9.380284471197015E-5 0.0 0.0 3.3872441732604206 0.0 19 9.380284471197015E-5 0.0 0.0 3.516926606074719 0.0 20 1.1725355588996269E-4 0.0 0.0 3.6426927701222933 0.0 21 1.1725355588996269E-4 0.0 0.0 3.8176585262212956 0.0 22 1.4070426706795525E-4 0.0 0.0 4.006671258315915 0.0 23 1.6415497824594778E-4 0.0 0.0 4.207151388176573 0.0 24 1.876056894239403E-4 0.0 0.0 4.362770307553732 0.0 25 2.1105640060193286E-4 0.0 0.0 4.485909991949371 0.0 26 2.1105640060193286E-4 0.0 0.0 4.600982631699781 0.0 27 2.1105640060193286E-4 0.0 0.0 4.707214353336086 0.0 28 2.579578229579179E-4 0.0 0.0 4.830682347688217 0.0 29 2.579578229579179E-4 0.0 0.0 4.9636947814897905 0.0 30 2.579578229579179E-4 0.0 0.0 5.126114407108568 0.0 31 2.579578229579179E-4 0.0 0.0 5.290879103845143 0.0 32 2.579578229579179E-4 0.0 0.0 5.446122811843454 0.0 33 2.579578229579179E-4 0.0 0.0 5.585279331973661 0.0 34 3.2830995649189555E-4 0.0 0.0 5.7482852253718875 0.0 35 3.2830995649189555E-4 0.0 0.0 5.941495634767368 0.0 36 3.2830995649189555E-4 0.0 0.0 6.1200024482542466 0.0 37 3.2830995649189555E-4 0.0 0.0 6.301112290681884 0.0 38 3.2830995649189555E-4 0.0 0.0 6.464962409682517 0.0 39 3.2830995649189555E-4 0.0 0.0 6.621636611062685 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTATACG 80 0.0 45.0 1 TCGTAAT 35 1.2129567E-7 45.0 13 CAATACG 20 7.035442E-4 45.0 1 CTTACGT 25 3.892591E-5 45.0 22 GCGATAT 835 0.0 42.574852 9 ACGGGTC 250 0.0 42.300003 5 CGTTACA 60 3.6379788E-12 41.250004 35 CGGTCTA 230 0.0 41.086956 31 TGTACGA 55 6.184564E-11 40.909092 34 GACCGTT 105 0.0 40.714287 9 GCACCGA 1855 0.0 40.26954 9 ACCGTTG 95 0.0 40.263157 10 CGTATTT 680 0.0 40.036766 1 ACGATTG 90 0.0 40.000004 1 CGGAATA 40 3.461173E-7 39.375 39 CTATCGT 40 3.461173E-7 39.375 41 CATTCTA 1400 0.0 39.375 45 TCGCTAA 40 3.461173E-7 39.375 15 GCTCGAC 40 3.461173E-7 39.375 20 TATAGCG 390 0.0 39.23077 1 >>END_MODULE