##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545307_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2076598 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.339623749998797 31.0 31.0 33.0 30.0 34.0 2 31.66403367430769 31.0 31.0 34.0 30.0 34.0 3 31.75771526313711 31.0 31.0 34.0 30.0 34.0 4 30.30412915740071 35.0 33.0 37.0 0.0 37.0 5 32.90153414382562 35.0 33.0 37.0 19.0 37.0 6 34.54913565360267 35.0 33.0 37.0 30.0 37.0 7 35.49710199085234 36.0 35.0 37.0 33.0 37.0 8 35.68802676300372 37.0 35.0 37.0 35.0 37.0 9 37.73240752422954 39.0 37.0 39.0 35.0 39.0 10 37.220097967926385 39.0 37.0 39.0 34.0 39.0 11 36.80219185417688 39.0 35.0 39.0 33.0 39.0 12 35.58002848890349 37.0 35.0 39.0 31.0 39.0 13 35.111174141552674 37.0 35.0 39.0 30.0 39.0 14 35.93288831059262 37.0 35.0 40.0 30.0 41.0 15 36.26991984004608 37.0 35.0 40.0 31.0 41.0 16 36.485581706232985 37.0 35.0 40.0 32.0 41.0 17 36.41489397562744 37.0 35.0 40.0 32.0 41.0 18 36.394310309458064 37.0 35.0 40.0 31.0 41.0 19 36.36957225230883 37.0 35.0 40.0 31.0 41.0 20 36.25369233717841 37.0 35.0 40.0 31.0 41.0 21 36.08412701928828 36.0 34.0 40.0 31.0 41.0 22 35.95942257480745 36.0 34.0 40.0 30.0 41.0 23 35.93360294096402 36.0 34.0 40.0 31.0 41.0 24 35.837432184756025 36.0 34.0 40.0 30.0 41.0 25 35.731964973480665 36.0 34.0 40.0 30.0 41.0 26 35.55957628775526 35.0 34.0 40.0 30.0 41.0 27 35.55432442870502 36.0 34.0 40.0 30.0 41.0 28 35.604961095021764 36.0 34.0 40.0 30.0 41.0 29 35.666422677860616 36.0 34.0 40.0 30.0 41.0 30 35.64485567259528 36.0 34.0 40.0 30.0 41.0 31 35.511182713264674 36.0 34.0 40.0 30.0 41.0 32 35.39715486579492 35.0 34.0 40.0 30.0 41.0 33 35.25973443102613 35.0 34.0 40.0 29.0 41.0 34 35.18687873146367 35.0 34.0 40.0 29.0 41.0 35 35.07237414270841 35.0 34.0 40.0 29.0 41.0 36 34.866481138862696 35.0 34.0 40.0 27.0 41.0 37 34.792085420481 35.0 33.0 40.0 27.0 41.0 38 34.79467330701465 35.0 33.0 40.0 27.0 41.0 39 34.75530121862778 35.0 33.0 40.0 27.0 41.0 40 34.60415978441663 35.0 33.0 40.0 27.0 41.0 41 34.606459218394704 35.0 34.0 40.0 27.0 41.0 42 34.572266273973106 35.0 33.0 40.0 27.0 41.0 43 34.49352932055217 35.0 33.0 39.0 27.0 41.0 44 34.4245689343821 35.0 33.0 39.0 27.0 41.0 45 34.32783427509802 35.0 33.0 39.0 27.0 41.0 46 34.29344389236626 35.0 33.0 39.0 27.0 41.0 47 34.23059157333292 35.0 33.0 39.0 27.0 41.0 48 34.146727965643805 35.0 33.0 39.0 27.0 41.0 49 34.10434951781712 35.0 33.0 39.0 26.0 41.0 50 33.929953221567196 35.0 33.0 38.0 26.0 40.0 51 33.840712550045794 35.0 33.0 38.0 26.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 1.0 12 3.0 13 3.0 14 9.0 15 36.0 16 110.0 17 346.0 18 802.0 19 1614.0 20 2832.0 21 4769.0 22 7332.0 23 10823.0 24 15461.0 25 21428.0 26 28113.0 27 34327.0 28 41805.0 29 51246.0 30 64038.0 31 81265.0 32 105617.0 33 156890.0 34 242677.0 35 334176.0 36 150303.0 37 187328.0 38 241569.0 39 291437.0 40 237.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.806348652941015 26.03041127844677 30.231561428836972 11.931678639775248 2 28.213741899009825 26.904340657171005 31.13597335642238 13.745944087396792 3 29.06388236914415 27.231606695181256 30.06855443374211 13.635956501932487 4 23.25308027841691 38.41711298961089 25.20569701020612 13.12410972176608 5 24.49727872221778 32.790265617129556 29.00436194198396 13.708093718668707 6 22.052173795794854 41.096784259640046 25.569946614607158 11.28109532995794 7 89.80630820216527 4.183765947959114 4.197345851243235 1.8125799986323785 8 92.02199944332028 2.872486634389516 3.417127436316514 1.6883864859736937 9 88.6289016940207 4.377737048769189 4.477371161871484 2.5159900953386263 10 61.517202655497115 20.38401269769113 8.506990760850199 9.591793885961557 11 54.64215991732632 18.303783399579505 14.31167707953104 12.742379603563137 12 48.386543760516 20.412569019136107 17.677566866576967 13.523320353770925 13 21.755823707814415 43.422896487428 18.943965081349397 15.87731472340819 14 14.675396971392635 45.213228559403404 24.137507596559374 15.973866872644585 15 14.18680938727669 22.21975558100316 48.97365787696993 14.61977715475022 16 16.72678101394685 16.142508082931794 47.27790357112932 19.852807331992036 17 17.500450255658535 17.764054477563786 25.410792074344673 39.324703192433006 18 22.6517602347686 24.705359438851428 30.729780150033854 21.91310017634612 19 34.09225088341605 24.31857297368099 20.43491325716388 21.15426288573908 20 37.57068050725273 23.256403020709833 19.741471387336404 19.431445084701036 21 25.149499325338848 28.380023480712204 23.57514550240345 22.895331691545497 22 24.162596708655215 25.394804386790316 21.865185269368457 28.577413635186012 23 24.1789214860074 31.373862442321528 20.575431547174755 23.871784524496313 24 22.894175955095786 22.659946701287396 35.73358926474937 18.712288078867456 25 19.31042984727906 25.560219166155413 32.94152262498567 22.187828361579854 26 18.663506369552508 37.22641551229463 23.540425253226672 20.56965286492619 27 21.46298898486852 33.74254429600722 26.199534045588024 18.594932673536235 28 16.962599405373595 29.240950824377176 36.950772369038205 16.84567740121102 29 17.539600827892542 25.868271085689187 35.347476979174594 21.244651107243676 30 21.389503408940968 30.502051913755096 27.711863345722186 20.39658133158175 31 33.08989029171751 26.654653428347714 19.686766528716678 20.5686897512181 32 35.28102213331613 26.739166656232932 20.876549048010254 17.103262162440686 33 30.460686179992468 27.887294507651454 20.644920201213715 21.00709911114236 34 21.14781002389485 27.224527809426764 25.563734531189958 26.063927635488426 35 22.58333100580854 24.755585818728516 28.27754818217103 24.383534993291914 36 33.90193961469673 24.58810034489102 22.305713479450525 19.204246560961728 37 23.193945096739956 32.56499332080644 25.399571799645383 18.841489782808228 38 22.81457460712184 33.587434833318724 20.32218079763151 23.275809761927924 39 23.553234665544316 31.499789559654783 23.698038811556206 21.24893696324469 40 26.412141396649712 24.209404034868566 23.66341487375024 25.71503969473148 41 17.793670224087666 23.47926753276272 25.612805174617332 33.11425706853228 42 24.277399862659983 26.67150791823935 20.66789046315175 28.38320175594891 43 23.890420774747927 26.537490645758112 23.29242347339254 26.279665106101426 44 22.055689160829395 30.553096940284064 26.268300364345915 21.122913534540626 45 19.124548901616972 36.71408717527417 19.423499396609262 24.737864526499592 46 22.229675652196526 34.003885200698456 22.67983499935953 21.086604147745494 47 23.564503095929016 25.32435261904326 26.342267497127516 24.76887678790021 48 25.874146079308563 21.086026279520638 29.72202612156999 23.31780151960081 49 21.93992289311653 23.02597806604841 30.310873842698488 24.723225198136568 50 19.247297743713514 33.88113635860191 24.362105713286827 22.50946018439775 51 19.180505808057216 34.02834828888403 22.075962704384768 24.715183198673984 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 284.0 1 673.5 2 1063.0 3 2863.5 4 4664.0 5 3522.5 6 2381.0 7 2611.0 8 2841.0 9 3101.0 10 3361.0 11 3500.0 12 3639.0 13 3643.0 14 3647.0 15 3380.0 16 3113.0 17 3406.0 18 3699.0 19 3365.0 20 3031.0 21 3394.5 22 3758.0 23 3881.5 24 4005.0 25 6695.5 26 9479.0 27 9572.0 28 13185.0 29 16798.0 30 19831.0 31 22864.0 32 27326.0 33 31788.0 34 32908.5 35 34029.0 36 39357.0 37 44685.0 38 59594.0 39 74503.0 40 112489.5 41 150476.0 42 180400.0 43 210324.0 44 213363.5 45 216403.0 46 197890.5 47 179378.0 48 167908.0 49 156438.0 50 144971.0 51 133504.0 52 130152.5 53 126801.0 54 114626.0 55 102451.0 56 100813.5 57 99176.0 58 103432.5 59 107689.0 60 102414.0 61 97139.0 62 85301.0 63 73463.0 64 61275.0 65 49087.0 66 40363.0 67 31639.0 68 26696.0 69 21753.0 70 19206.5 71 16660.0 72 13826.0 73 10992.0 74 8138.0 75 4114.0 76 2944.0 77 2027.5 78 1111.0 79 811.0 80 511.0 81 328.5 82 146.0 83 116.0 84 86.0 85 54.0 86 22.0 87 14.5 88 7.0 89 4.5 90 2.0 91 1.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2076598.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 15.26480829470946 #Duplication Level Percentage of deduplicated Percentage of total 1 78.77928088806722 12.02550620351415 2 8.751842330776114 2.6719039080964126 3 2.8732598410940993 1.3157928196556639 4 1.3275427830354127 0.8105874434424262 5 0.77373733839388 0.5905476070520661 6 0.4882694560103753 0.4472003785296272 7 0.3362403175954329 0.35928507923325553 8 0.25636187976410313 0.31306519589363124 9 0.21703376336887972 0.29816809121747573 >10 2.652503737666998 10.033998474197166 >50 1.44721873494716 16.185166867867334 >100 2.077403486985174 52.66216395163749 >500 0.01758174209031586 1.79805363290842 >1k 0.0017237002049329275 0.48856034675491017 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 2326 0.11201012425129948 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2129 0.10252345422657637 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.051767361810037375 0.0 2 0.0 0.0 0.0 0.1786575928513848 0.0 3 0.0 0.0 0.0 0.27188699979485675 0.0 4 0.0 0.0 0.0 0.45170032909595403 0.0 5 0.0 0.0 0.0 0.7768956726337982 0.0 6 0.0 0.0 0.0 1.0962641782376752 0.0 7 0.0 0.0 0.0 1.2576820357141825 0.0 8 0.0 0.0 0.0 1.6346928967474688 0.0 9 0.0 0.0 0.0 1.7383239317383528 0.0 10 0.0 0.0 0.0 1.9342212599646151 0.0 11 0.0 0.0 0.0 2.2206994324370917 0.0 12 0.0 0.0 0.0 2.465667404090729 0.0 13 0.0 0.0 0.0 2.559522834944462 0.0 14 0.0 0.0 0.0 2.59814369463902 0.0 15 0.0 0.0 0.0 2.6632501813061555 0.0 16 0.0 0.0 0.0 2.802997980350554 0.0 17 0.0 0.0 0.0 2.9645603048832756 0.0 18 0.0 0.0 0.0 3.1560754657377115 0.0 19 0.0 0.0 0.0 3.2720825118776 0.0 20 0.0 0.0 0.0 3.3997913895708267 0.0 21 4.815568540468593E-5 0.0 0.0 3.550181595089661 0.0 22 4.815568540468593E-5 0.0 0.0 3.702112782541445 0.0 23 4.815568540468593E-5 0.0 0.0 3.8711392383118928 0.0 24 4.815568540468593E-5 0.0 0.0 3.996247708993267 0.0 25 4.815568540468593E-5 0.0 0.0 4.098385917736605 0.0 26 4.815568540468593E-5 0.0 0.0 4.196334581849737 0.0 27 9.631137080937186E-5 0.0 0.0 4.289756611534828 0.0 28 9.631137080937186E-5 0.0 0.0 4.4004183765947955 0.0 29 9.631137080937186E-5 0.0 0.0 4.51873689563411 0.0 30 9.631137080937186E-5 0.0 0.0 4.65973674249903 0.0 31 9.631137080937186E-5 0.0 0.0 4.800255032509903 0.0 32 9.631137080937186E-5 0.0 0.0 4.9233409644042805 0.0 33 9.631137080937186E-5 0.0 0.0 5.050905375041293 0.0 34 9.631137080937186E-5 0.0 0.0 5.1898345274338125 0.0 35 9.631137080937186E-5 0.0 0.0 5.357657091069143 0.0 36 9.631137080937186E-5 0.0 0.0 5.5158003619381315 0.0 37 9.631137080937186E-5 0.0 0.0 5.668453884670986 0.0 38 9.631137080937186E-5 0.0 0.0 5.806805168838649 0.0 39 9.631137080937186E-5 0.0 0.0 5.955943326536961 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTATACG 40 6.8193913E-9 45.000004 1 CCACTAG 40 6.8193913E-9 45.000004 1 CTACGAT 20 7.0346013E-4 45.000004 19 CGCTAAC 40 6.8193913E-9 45.000004 37 CGTTTAG 20 7.0346013E-4 45.000004 30 TGGTCGA 20 7.0346013E-4 45.000004 26 TACGTCT 20 7.0346013E-4 45.000004 36 TACGTCG 20 7.0346013E-4 45.000004 37 ACTATCG 25 3.891898E-5 45.0 11 CGAACTA 25 3.891898E-5 45.0 28 CGCATTG 25 3.891898E-5 45.0 39 GTTAGTA 25 3.891898E-5 45.0 22 CATTCGA 25 3.891898E-5 45.0 31 GTGTCGA 45 3.8562575E-10 45.0 14 GTACTCG 25 3.891898E-5 45.0 1 ACTCGTT 25 3.891898E-5 45.0 32 CATCGTA 35 1.2125565E-7 45.0 18 ACCGTAT 25 3.891898E-5 45.0 6 ATACGTC 35 1.2125565E-7 45.0 37 GCTCGAT 25 3.891898E-5 45.0 19 >>END_MODULE