##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545306_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1974748 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.39217611563602 31.0 31.0 33.0 30.0 34.0 2 31.705919438834727 31.0 31.0 34.0 30.0 34.0 3 31.778734805656214 31.0 31.0 34.0 30.0 34.0 4 30.284517822020835 35.0 33.0 37.0 0.0 37.0 5 32.888280428692674 35.0 33.0 37.0 19.0 37.0 6 34.54714069845874 35.0 33.0 37.0 30.0 37.0 7 35.555754455758404 37.0 35.0 37.0 33.0 37.0 8 35.76080087180744 37.0 35.0 37.0 35.0 37.0 9 37.8370637671237 39.0 38.0 39.0 35.0 39.0 10 37.34127949490264 39.0 37.0 39.0 35.0 39.0 11 36.78423019038379 39.0 35.0 39.0 33.0 39.0 12 35.129792763431084 35.0 35.0 39.0 31.0 39.0 13 34.51171947002858 35.0 33.0 39.0 27.0 39.0 14 35.16047060181856 35.0 33.0 40.0 27.0 41.0 15 35.65851389645666 35.0 34.0 40.0 30.0 41.0 16 35.94861015177633 35.0 34.0 40.0 32.0 41.0 17 35.9341399510216 35.0 34.0 40.0 32.0 41.0 18 35.929075507355876 36.0 35.0 40.0 31.0 41.0 19 35.8778866974419 36.0 35.0 40.0 31.0 41.0 20 35.72243192549125 35.0 34.0 40.0 31.0 41.0 21 35.52829069835746 35.0 34.0 40.0 31.0 41.0 22 35.36576616358138 35.0 34.0 40.0 30.0 41.0 23 35.40164415915347 35.0 34.0 40.0 31.0 41.0 24 35.30364330030971 35.0 34.0 40.0 30.0 41.0 25 35.19161887997861 35.0 34.0 39.0 30.0 41.0 26 35.022342597637774 35.0 34.0 39.0 30.0 41.0 27 35.0055201980202 35.0 34.0 39.0 30.0 41.0 28 35.10692250352957 35.0 34.0 39.0 30.0 41.0 29 35.23138091543832 35.0 34.0 39.0 30.0 41.0 30 35.2314102862745 36.0 34.0 39.0 30.0 41.0 31 35.03455782712528 35.0 34.0 39.0 30.0 41.0 32 34.86394213337601 35.0 34.0 39.0 29.0 41.0 33 34.75023142193333 35.0 34.0 39.0 29.0 41.0 34 34.71104566253517 35.0 34.0 39.0 29.0 41.0 35 34.553837249107225 35.0 34.0 39.0 29.0 41.0 36 34.28810562157805 35.0 33.0 39.0 27.0 41.0 37 34.20117807436696 35.0 33.0 39.0 27.0 41.0 38 34.24991593864129 35.0 33.0 39.0 27.0 41.0 39 34.243731858444725 35.0 33.0 39.0 27.0 41.0 40 34.07366408270828 35.0 33.0 38.0 26.0 41.0 41 34.12757121414985 35.0 33.0 38.0 27.0 41.0 42 34.0847495477904 35.0 33.0 38.0 27.0 41.0 43 33.994734011630854 35.0 33.0 38.0 27.0 41.0 44 33.918954215930334 35.0 33.0 38.0 27.0 41.0 45 33.80985877691736 35.0 33.0 38.0 27.0 40.0 46 33.799911684933974 35.0 33.0 38.0 27.0 40.0 47 33.74809798516064 35.0 33.0 38.0 27.0 40.0 48 33.71660890402218 35.0 33.0 38.0 27.0 40.0 49 33.73603821854738 35.0 33.0 37.0 26.0 40.0 50 33.5443732567396 35.0 33.0 37.0 26.0 40.0 51 33.46292083850699 35.0 33.0 37.0 26.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 3.0 12 1.0 13 1.0 14 14.0 15 37.0 16 105.0 17 339.0 18 746.0 19 1593.0 20 2839.0 21 4641.0 22 7268.0 23 11167.0 24 15800.0 25 22284.0 26 29028.0 27 35447.0 28 42515.0 29 51904.0 30 64110.0 31 82729.0 32 108352.0 33 170570.0 34 271617.0 35 391352.0 36 121380.0 37 140717.0 38 180473.0 39 217532.0 40 184.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.248315228069604 25.702317460253155 30.88252273201441 13.166844579662824 2 27.832209476854768 26.13589176948147 32.61373096719176 13.418167786471995 3 27.886899999392327 25.929688243765785 31.64099925661401 14.542412500227877 4 21.759941015258654 38.57352938197684 27.028056238061772 12.638473364702737 5 23.702112877187368 32.297285527064716 29.97729330527237 14.023308290475544 6 21.70185765474886 40.91048579363037 25.731384460194413 11.656272091426349 7 90.22239799711153 4.094243923781668 4.156732909718101 1.5266251693887016 8 92.99181465179355 2.0313984366612856 3.3030543644049772 1.6737325471401923 9 90.34773044459344 3.141818601664617 4.6029670621264085 1.9074838916155377 10 70.26856084928305 14.60383805933719 7.145367408904832 7.982233682474929 11 64.48316443414552 13.848703733337114 12.386998239775405 9.28113359274196 12 54.88816800928523 20.471827291380976 14.518763913167653 10.121240786166133 13 19.217084914125753 53.58334329240997 16.16170772169411 11.037864071770171 14 10.903922930925871 52.92179052719638 24.22354649808482 11.95074004379293 15 10.277513890379938 19.65091242021767 58.0732326352527 11.998341054149694 16 11.406518705171495 13.678504801625321 55.13012293214121 19.78485356106197 17 13.914484278500344 15.643869496259777 24.409950029067 46.03169619617288 18 22.656966863620067 22.555637478807423 33.46356092017817 21.32383473739434 19 34.69708540026373 23.44385207631556 20.23817722565107 21.62088529776964 20 37.20570928543794 22.471272283855964 19.940721550294015 20.38229688041208 21 22.23301403520854 30.21509579956531 24.65109472195946 22.900795443266688 22 23.155815324284415 24.88185834344433 22.057042215006675 29.90528411726458 23 19.89013281694677 33.88579200991722 20.369383840368492 25.854691332767523 24 20.529049782554534 21.868309272879376 41.637160792161836 15.965480152404258 25 15.400749867831237 25.325408609098478 37.60727951110724 21.666562011963045 26 14.94246354471558 41.35682122478413 23.891807967396346 19.80890726310395 27 16.17375989240146 37.74106873383338 27.97430355670698 18.11086781705818 28 12.753171543913453 28.86763273085984 44.20219693854609 14.176998786680631 29 12.171071954497485 23.82324225673352 42.68934567853721 21.31634011023179 30 18.339960339243287 32.026769997994684 30.4994358773879 19.133833785374133 31 34.59190742312437 25.59045508591476 21.21571967663722 18.601917814323652 32 35.565297445547486 26.550577592685244 22.247041141451973 15.6370838203153 33 31.24272059017151 26.907686449106414 22.41617664633665 19.43341631438543 34 18.231389524131686 27.199267957227963 27.434589122257623 27.134753396382727 35 19.745658686576718 24.432585828672824 32.431429225399896 23.390326259350562 36 35.85358739444223 21.21835292401866 24.72842104410284 18.19963863743627 37 20.73586098074286 33.187323141990774 27.852515865315475 18.22430001195089 38 19.691930312120835 35.00026332473814 21.468106310273512 23.839700052867503 39 20.528188913218294 34.65748541079672 24.38265540717094 20.431670268814045 40 26.69140568821946 24.57224921863448 21.730772736571957 27.005572356574103 41 15.86384693135529 22.00523813671415 25.164426043221717 36.96648888870884 42 23.7163931802944 24.8655524654285 20.543026249425242 30.87502810485186 43 23.038433258319543 27.77225245955433 22.335862601202784 26.85345168092334 44 19.947304668747606 33.03140451338601 26.86150334118581 20.15978747668057 45 16.02781722022253 42.17915399838359 18.58824518368926 23.20478359770462 46 22.565208320251497 34.74939587228345 24.063829916526057 18.621565890938996 47 22.42529173342624 25.571060206163015 26.379213955400893 25.624434105009854 48 24.89203685736104 18.73666918513147 33.128632109008336 23.24266184849915 49 20.501046209440393 20.793893701879938 33.52280898626053 25.182251102419144 50 17.545884335621558 36.70513908610111 23.86441206675485 21.884564511522484 51 17.162088529776966 38.970542064101345 20.207287208291895 23.660082197829798 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 338.0 1 531.0 2 724.0 3 2337.0 4 3950.0 5 3132.0 6 2314.0 7 2743.5 8 3173.0 9 3675.5 10 4178.0 11 4414.0 12 4650.0 13 4525.5 14 4401.0 15 4320.5 16 4240.0 17 3858.5 18 3477.0 19 3309.5 20 3142.0 21 3744.0 22 4346.0 23 3620.0 24 2894.0 25 4119.5 26 6348.5 27 7352.0 28 7730.0 29 8108.0 30 11209.0 31 14310.0 32 20695.0 33 27080.0 34 30286.5 35 33493.0 36 37081.5 37 40670.0 38 61994.0 39 83318.0 40 128604.5 41 173891.0 42 219118.5 43 264346.0 44 258398.5 45 252451.0 46 223638.5 47 194826.0 48 181949.0 49 169072.0 50 156680.5 51 144289.0 52 126036.5 53 107784.0 54 96885.0 55 85986.0 56 81707.5 57 77429.0 58 68054.5 59 58680.0 60 55885.5 61 53091.0 62 49315.0 63 45539.0 64 40018.0 65 34497.0 66 27016.0 67 19535.0 68 15336.5 69 11138.0 70 9601.5 71 8065.0 72 7420.0 73 6775.0 74 4950.5 75 2319.5 76 1513.0 77 1039.0 78 565.0 79 368.5 80 172.0 81 276.0 82 380.0 83 207.5 84 35.0 85 31.5 86 28.0 87 24.5 88 21.0 89 15.0 90 9.0 91 5.0 92 1.0 93 1.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1974748.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 14.779805768785728 #Duplication Level Percentage of deduplicated Percentage of total 1 78.85918775140172 11.655234780499239 2 9.592514417008296 2.83550999835319 3 3.1798505221588744 1.4099271927384012 4 1.4226465032453424 0.8410575598243342 5 0.7520960298467921 0.5557916620305231 6 0.4607759894127016 0.40861077758638786 7 0.35390419929793177 0.3661444728466747 8 0.23244490824730824 0.2748392476670748 9 0.18909669828515868 0.25153312249559906 >10 1.971078667997685 6.842370973304239 >50 0.8595527307465826 9.355612951263405 >100 2.09772685913822 62.256939134723524 >500 0.027257753776626925 2.5516762931770116 >1k 0.0018669694367552687 0.39475183349039 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0645145608452319 0.0 2 0.0 0.0 0.0 0.21815441767759736 0.0 3 0.0 0.0 0.0 0.3040387938106533 0.0 4 0.0 0.0 0.0 0.5112551069807388 0.0 5 0.0 0.0 0.0 0.802077024511482 0.0 6 0.0 0.0 0.0 1.1070779664038146 0.0 7 0.0 0.0 0.0 1.2749474869704893 0.0 8 0.0 0.0 0.0 1.7030527439450502 0.0 9 0.0 0.0 0.0 1.8222071879551214 0.0 10 0.0 0.0 0.0 2.0153963948817775 0.0 11 0.0 0.0 0.0 2.3460714987431306 0.0 12 0.0 0.0 0.0 2.6024080034515795 0.0 13 0.0 0.0 0.0 2.706725111254702 0.0 14 0.0 0.0 0.0 2.7462238219762725 0.0 15 0.0 0.0 0.0 2.8066872330039074 0.0 16 0.0 0.0 0.0 2.9500472971741205 0.0 17 0.0 0.0 0.0 3.1200943107677537 0.0 18 0.0 0.0 0.0 3.317030831275687 0.0 19 0.0 0.0 0.0 3.4364891115220777 0.0 20 0.0 0.0 0.0 3.5708353673481374 0.0 21 0.0 0.0 0.0 3.7345524593517756 0.0 22 0.0 0.0 0.0 3.90277645552749 0.0 23 0.0 0.0 0.0 4.098092516108385 0.0 24 0.0 0.0 0.0 4.2324894113071645 0.0 25 0.0 0.0 0.0 4.343440276936602 0.0 26 0.0 0.0 0.0 4.449681680903082 0.0 27 0.0 0.0 0.0 4.54680799777997 0.0 28 0.0 0.0 0.0 4.663582391272203 0.0 29 0.0 0.0 0.0 4.778381849228357 0.0 30 0.0 0.0 0.0 4.940883596286716 0.0 31 0.0 0.0 0.0 5.09614391304612 0.0 32 0.0 0.0 0.0 5.2236538535549855 0.0 33 0.0 0.0 0.0 5.349695252254971 0.0 34 0.0 0.0 0.0 5.498068614324461 0.0 35 0.0 0.0 0.0 5.707107944912464 0.0 36 0.0 0.0 0.0 5.861406113590189 0.0 37 0.0 0.0 0.0 6.003905308424163 0.0 38 0.0 0.0 0.0 6.149088390012295 0.0 39 0.0 0.0 0.0 6.3059691666987385 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATCACG 25 3.8918268E-5 45.000004 28 TAATACG 25 3.8918268E-5 45.000004 41 CGTATTA 50 2.1827873E-11 45.000004 23 TCCGCGT 25 3.8918268E-5 45.000004 20 CTCCGTA 25 3.8918268E-5 45.000004 3 CACGGTA 25 3.8918268E-5 45.000004 35 CCGTGCT 25 3.8918268E-5 45.000004 11 GATTTCG 25 3.8918268E-5 45.000004 10 TTCGTAC 25 3.8918268E-5 45.000004 33 CGACATA 25 3.8918268E-5 45.000004 28 CCGTAGA 25 3.8918268E-5 45.000004 45 TATTCGT 25 3.8918268E-5 45.000004 16 ACGCTTA 25 3.8918268E-5 45.000004 36 CGTACGT 25 3.8918268E-5 45.000004 26 GTATCGC 25 3.8918268E-5 45.000004 9 ACTCGAA 25 3.8918268E-5 45.000004 45 TCGTACA 25 3.8918268E-5 45.000004 34 CTCGACT 25 3.8918268E-5 45.000004 28 GTATACT 25 3.8918268E-5 45.000004 42 CGTCGAA 25 3.8918268E-5 45.000004 31 >>END_MODULE