SRR1545305_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545305_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	2387364
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	4129	0.1729522603172369	No Hit
AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	3949	0.16541256381515346	No Hit
GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT	3545	0.148490133888255	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2463	0.10316818047017547	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCGATAG	125	0.0	45.000004	1
GTCCGTT	35	1.2126657E-7	45.000004	10
CTATTCG	45	3.8562575E-10	45.000004	12
TGTCGAC	35	1.2126657E-7	45.000004	18
TCGAACA	45	3.8562575E-10	45.000004	1
ATCGATC	35	1.2126657E-7	45.000004	12
TATTTCG	20	7.0348155E-4	45.0	44
ATTCGTT	25	3.8920727E-5	45.0	14
TACGCTA	25	3.8920727E-5	45.0	19
TACGCAT	20	7.0348155E-4	45.0	44
CGAATCG	20	7.0348155E-4	45.0	9
CTACCGT	20	7.0348155E-4	45.0	31
ACTCGCT	25	3.8920727E-5	45.0	34
CGTAACA	25	3.8920727E-5	45.0	35
CGTAAAC	20	7.0348155E-4	45.0	44
TGTACGA	25	3.8920727E-5	45.0	19
CCGTTAA	20	7.0348155E-4	45.0	30
TGTTTCG	30	2.1664891E-6	44.999996	1
GTCGACG	30	2.1664891E-6	44.999996	1
TTGCGAA	30	2.1664891E-6	44.999996	12